Sus scrofa (pig): 100523504
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Entry
100523504 CDS
T01009
Symbol
GRIK4
Name
(RefSeq) glutamate receptor ionotropic, kainate 4 isoform X1
KO
K05204
glutamate receptor, ionotropic kainate 4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100523504 (GRIK4)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100523504 (GRIK4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100523504 (GRIK4)
Ion channels [BR:
ssc04040
]
Ligand-gated channels
Glutamate (ionotropic)
100523504 (GRIK4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
100523504
NCBI-ProteinID:
XP_020918650
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Position
9:47639987..48095803
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AA seq
956 aa
AA seq
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MPRVSAPLVLLPAWLVMVACSPHSLRIAAILDDPMECSRGERLSITLAKNRINRAPERLG
KAKVEVDIFELLRDSEYETAETMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFK
VAPEEFIKFQFQRFTTLNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLLR
QFLISKDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAY
YTYIFTNLEFSLQRMDSLVDDRVNILGFSIFNQSHAFFQEFAQSLNQSWQENCDHVPFTG
PALSSALLFDAVYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLT
GHIEFNSKGQRSNYALKILQFTRNGFRQIGQWHVADGLSMDSRLYASNISDSLFNTTLVV
TTILENPYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGVPEANG
TWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSFL
DPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFP
VGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLA
DQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSNYAF
LLESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNRLEILK
RKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEFLWTLRHSEATEVS
VCQEMVTELRSIILCQDSVHPRRRRSGLPPPRPPIPEERRPRGTVTLSNGKLCGAGEPDQ
LAQRLAQEAALVARGCTHIRVCPECRRFQGLRARPSPARSEESLEWEKTTNSSEPE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgtctcggcgcctttggtgctgcttcctgcgtggctcgtgatggtcgcctgc
agtccgcactccctgagaatcgctgctatcttggatgaccccatggagtgcagcagaggg
gagcggctctccatcaccctggccaagaaccgcatcaaccgcgctcctgagaggctgggc
aaggccaaggtcgaagtggacatctttgagcttctcagagacagcgagtacgagactgca
gaaaccatgtgtcagatccttcccaaaggggtggtcgccgtcctgggaccatcctccagc
ccggcctccagctccatcatcagcaacatctgtggggagaaggaggtccctcatttcaaa
gtggccccagaggagtttatcaagttccagttccagagattcacaaccctgaacctccac
cccagcaacaccgacatcagcgtggctgtagctgggatcctgaacttcttcaactgcacc
accgcctgcctcatctgtgccaaagcagaatgccttttaaacctggagaagctgctccgg
caattccttatctccaaggacacactctccgtccggatgctggatgacaccagggacccc
accccactcctgaaggagatccgggacgacaagacagccaccatcatcatccacgcgaat
gcctccatgtcccacaccatcctcctgaaggcagcggaactagggatggtgtcagcctac
tacacatacatcttcactaatctggagttctcgctccagaggatggacagcctcgtggat
gatcgcgtcaacatcctgggattttccattttcaaccagtcccacgctttcttccaagag
tttgcccagagcctcaaccagtcctggcaggagaactgtgaccacgtgcccttcacaggg
cccgcgctgtcctcagccctgctgtttgacgccgtctatgctgtggtgacagcagtgcag
gagctgaaccgcagccaggagattggtgtgaagcccctgtcctgtggctcggcccagatc
tggcagcatggcaccagcctcatgaactacctgcgcatggtagaattggaaggtctcacc
ggccacattgaattcaacagcaaaggccagaggtccaactatgccttgaaaatcttgcag
ttcacaaggaatggttttcggcagattggccagtggcacgtggcagacggcctgagcatg
gacagccgcctctacgcctccaacatctccgacagtctcttcaacaccaccctggtcgtc
accaccatcctggaaaacccgtatttaatgctgaaggggaaccaccaggagatggaaggc
aatgaccgctatgagggcttctgtgtggacatgcttaaggagctggcagagatcctccgg
ttcaactacaagatccgcctggtcggggacggcgtgtacggcgtgcctgaggccaatggc
acctggacgggaatggtcggggagctgatcgctcggaaagcagatctggccgtggcaggc
ctcaccatcacggctgaacgggagaaggtgattgatttctcaaagccattcatgactctg
ggaattagcattctttaccgagttcatatgggacgcagacctggctatttctccttcctg
gacccattttctccgggcgtctggctcttcatgcttctagcctatctggccgtcagctgc
gtcctcttcctggtggctcggttgaccccctatgagtggtacagcccccacccatgtgcc
cagggccggtgcaacctcctggtgaatcagtactcgctgggcaacagcctctggtttccg
gtcgggggcttcatgcagcagggctccaccattgcccctcgcgccttatccacccgctgt
gtcagtggcgtctggtgggcattcacgctgatcatcatctcatcctacacggccaacctg
gcagccttcctgaccgtgcagcgcatggatgtgcccattgagtcagtggacgacctggct
gaccagaccgccattgaatatggcacaattcacggaggctccagcatgaccttcttccaa
aattcccgctatcagacctaccagcgcatgtggaattacatgtactccaagcagcccagt
gtgtttgtgaagagcaccgaggaggggatcgccagggtgttgaactccaactacgccttc
ctgctggagtccaccatgaacgagtactatcggcagcgaaactgcaacctcactcagatt
gggggcctgctggacaccaagggctatgggattggcatgccagtcggctctgtcttccgc
gacgagtttgatctggccattctccagctgcaggagaacaaccgcctggaaattctgaag
cgcaagtggtgggaagggggcaagtgcccgaaggaggaggatcacagagccaaaggactg
ggcatggagaatattggtggaatctttgtggttcttatttgtggcttaatcgtggccatt
tttatggctatgttggagtttttgtggaccctccggcattctgaagcgactgaggtgtcc
gtctgccaggagatggtgaccgagctgcgcagcatcatcctgtgtcaggacagtgtccac
ccgcgccggcggcgctccggcctgcctccgccccggccccccatcccggaggagcgtcgg
ccccggggcaccgtgacgctcagcaacggcaagctgtgcggggccggggagcccgaccag
ctggcgcagagactggcccaagaggccgccctggtggcccgcggctgcacgcacatccgc
gtgtgccccgagtgccgccgtttccagggcctgcgggctcggccgtcgcccgcgcgcagc
gaggagagcctggagtgggagaagaccaccaacagcagcgaacccgagtag
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