Sus scrofa (pig): 100523598
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Entry
100523598 CDS
T01009
Symbol
HIP1
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin-interacting protein 1
KO
K04559
huntingtin interacting protein 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc05016
Huntington disease
ssc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100523598 (HIP1)
05022 Pathways of neurodegeneration - multiple diseases
100523598 (HIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100523598 (HIP1)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
100523598 (HIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Filament
Motif
Other DBs
NCBI-GeneID:
100523598
NCBI-ProteinID:
XP_020941973
Ensembl:
ENSSSCG00000007700
LinkDB
All DBs
Position
3:10416418..10578374
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AA seq
1037 aa
AA seq
DB search
MDRMASSMKQVPNPLPKVLSRRGVGAGMEAAERESFERTQTVSINKAINTQEVAVKEKHA
RTCILGTHHEKGAQTFWSVVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSLRYKNE
LSDMSRMWGHLSEGYGQLCSTYLTLLRTKMEYHTKNPRFPGNLQMSDRQLDEAGESDVNN
FFQLTVEMFDYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYTV
KLLFKLHSCLPADTLQGHRDRFMEQFTKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLR
ASALSEHISPVVVIPAEASSPDSEPVSEKDDLMDMDASQQNSFDSKFDDIFGSSSSSXPF
NFNSQNGVNKDEKDHLIDQLYKEISGLKAQLENMKTESQRAVLQLKGRVSELEAELAEQQ
HLRQQAADESEFLRAELDELKKKREDTEKAQRSLTEIERKAQANEQRYSRLKEKYSELVQ
NHADLLRKNAEVTKQVSVARQAQVDLEREKKELEDSFQRISDQAQRKTQEQTEVLESLKQ
ELATSKQELQIVQGSLETSAQSEAKWTAQIAELEKERGSLVNAVARQEEQLSALQEQLEY
TQLKLSSTQESICQLAKDQRKILLAESRRAAEQVVQEALRQFEEPTLFSCAGSADHLLCK
VRSVSSCIEQLEQCWSQYLACPEDISGLLHAVTLLAHLTSDTIVHGSTTCLRAPPEPADS
LTEACKQYGRETLIYLGFLEEEGILEKADSTAVRSCLTRITAIGEELLPRGLDIKQEELG
DLVDKELAATSAAIETATARIEEMLSKSRAGDTGVKLEVNERILGSCTSLMQAIQVLIVA
SKELQREIVESGRGTASPKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGRGKF
EELMVCSREIAASTAQLVAASKVKADKDSPNLAQLQQASRGVNQATAAVVASTVSGKLQI
EDTDNMDFXSMTLTQIKRQEMDSQVRVLELENELQKERQKLGELRKKHYELAGVAEGWEE
GTEASPPTLQEAVTEKE
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggaccggatggccagttccatgaagcaggtacccaaccctctgccaaaggtgctgagc
cggcgtggggtcggcgcggggatggaggcggcagagcgggagagcttcgagcggactcag
actgtcagcatcaataaggccattaatacgcaggaagtggccgtaaaggaaaaacacgcc
agaacatgcatactgggcacccaccatgagaagggggcacagaccttttggtctgttgtc
aaccggctgcccctctccagcaacgctgtgctctgctggaagttctgccacgtgttccac
aaactcctccgggatggacacccaaatgtcctgaaggactccctgagatacaaaaacgaa
ctgagtgacatgagcaggatgtggggccacctgagcgagggctacgggcagctctgcagc
acctacctcaccctgctgaggacgaagatggagtaccacaccaaaaatcccaggttccca
ggcaacctccagatgagtgaccggcagctggacgaggctggagagagtgacgtgaacaac
tttttccagctgacagtggagatgttcgactacctggagtgtgaacttaacctcttccag
actgtgttcaactctctggacatgtcccgctccgtgtcggtgacgacagccgggcagtgc
cgcctggccccgctgatccaggtcatcttggactgcagccacctctatgattacaccgtc
aagctcctcttcaaactccactcctgtctcccagccgacaccctgcaaggccaccgagac
cgcttcatggagcagttcacaaagttgaaagatctgttctaccgctccagcaaccttcag
tacttcaagcggctcattcagatccctcagctgccagagaacccgcccaacttcctccga
gcctccgccctgtcggagcacatcagccccgtggtggtgatccccgccgaggcctcgtcc
cccgacagtgagccggtctcagagaaggatgacctcatggacatggacgcctcccagcag
aattcgttcgacagcaagttcgatgacatcttcggcagctcctccagcagcngacccttc
aatttcaacagtcagaacggcgtgaacaaggatgagaaggaccacttaattgatcagctc
tacaaggagatcagtgggctgaaagcacagctggaaaacatgaagacggagagccagcgg
gcggtgctgcagctgaagggccgcgtcagcgagctggaagccgagctggcggagcagcag
cacctgcggcagcaggcggccgacgagagcgagttcctccgggcggagctggacgagctc
aagaagaagcgggaggacacggagaaggctcagcggagcctgacggagatagagaggaaa
gcccaggccaacgagcagcgctacagcaggctgaaggagaagtacagtgagctggtgcag
aaccacgctgacctgctgcggaagaatgcagaggtgaccaaacaggtgtcagtggccaga
caagcccaggtggatctggaacgagagaaaaaagagctagaggattccttccagcgcatc
agtgaccaggcccagcggaagactcaagaacagacagaagtgctagagagcttgaagcag
gaacttgccaccagcaaacaggagctccaaattgtccaaggcagcctggaaacgtctgcc
cagtcagaagccaaatggaccgcacagatcgccgaactggagaaggagcggggcagcctg
gtgaacgccgtggctcgccaggaggaacagttgtctgctcttcaggagcagctggaatac
acccagctcaaactgtccagcactcaggaatctatatgccagctcgcgaaggaccagcga
aaaatactcctggcggagtcacggagggctgcggagcaggtggtgcaggaggcgctgagg
cagttcgaggagcccactctcttcagctgcgctggatccgcagatcacctactctgcaag
gtcaggtccgtttccagctgcattgagcaactggaacaatgctggagccagtatctggcc
tgcccggaagatatcagtgggctcctccacgccgtcaccctcctggcccacttgaccagt
gacaccattgttcacggcagcaccacctgcctcagggccccgccggagcctgccgactca
ttgaccgaggcctgtaagcagtacggcagggagaccctcatctatctgggcttcctggag
gaagaaggaatcctcgagaaggccgatagcaccgccgtgaggagctgcctcaccaggatc
acagccattggcgaggagctcctgcccagaggcctggacatcaaacaggaggagctgggg
gacctggtggacaaggagctggctgccacttctgctgccattgaaaccgccacggccaga
atcgaggagatgctcagcaaatcccgagctggagacacaggagtcaaactggaggtgaac
gaaaggatcctcggttcctgtaccagcctcatgcaggctattcaggtcctgatcgtggcc
tcgaaggagctccagagagagatcgtggagagtggccggggtacagcatcccctaaagag
ttttatgccaagaattctcgatggacggaaggacttatctcagcctccaaagccgtgggc
tggggagccactgtcatggtggatgcagccgatctggtggtccaaggcagagggaaattc
gaggagctgatggtgtgttcacgtgaaattgccgccagcacagcccagctggtggccgcc
tccaaggtgaaagctgataaggacagcccaaacctggcccagctgcagcaggcctctcgg
ggtgtgaaccaggccaccgccgcagttgtggcctcaaccgtttctgggaaattacagatc
gaagacacagacaacatggacttcntcagcatgacgctgacccagatcaaacgccaggag
atggattctcaggttcgggtgctagagctagaaaacgaactgcagaaggagcgtcagaaa
ctgggagagcttcggaaaaagcactacgagctcgctggggtcgccgagggctgggaggaa
ggaacagaagcatcaccacctacgctgcaagaagcagtcacagagaaagaatag
DBGET
integrated database retrieval system
