Sus scrofa (pig): 100523973
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Entry
100523973 CDS
T01009
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04020
Calcium signaling pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100523973 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100523973 (PTAFR)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
100523973 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ssc04030
]
100523973 (PTAFR)
G protein-coupled receptors [BR:
ssc04030
]
Rhodopsin family
Others
Platelet activating factor
100523973 (PTAFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
100523973
NCBI-ProteinID:
XP_013851375
UniProt:
A0A287B7B1
A0A8D1Y0G6
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All DBs
Position
6:complement(85235390..85272360)
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AA seq
352 aa
AA seq
DB search
MTSCPLQPIRMEPNDSWRVDSEFRYTLFPIFYSIIFVLGVIANSYVLWVFARVYPSKKLN
EIKIFMLNLTMADLLFLVTLPLWIIYYYHEGNWILPKFLCNLAGCFFFINTYCSVSFLAV
ITYNRFQAVTRPIKTAQATTRKRGISLSLIIWVAMVAAASYFFVLDSTNIELSKTGAGNL
TRCFEHYEKGSMPVLIIHIFLVFSFFLVFLVILFCNLVIIRTLLTQSVQMQRNAEVKRRA
LWMVCTVLAVFIICFVPHHIVQLPWTLAELGFQSGNFHQAINDAHQITLCLLSTNCVLDP
IIYCFLTKKFRKHLSEKFYSLRGSRKCSRVTTETGTEVVVPLSQVPVNSLKK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctgccccctccagcccataaggatggagccaaatgattcctggcgtgtggac
tctgagttccgatacacactcttcccgattttttacagcatcatctttgtgctgggggtc
attgccaacagttacgtgctgtgggtctttgcccgcgtgtacccctccaagaagttgaat
gagataaagatctttatgttgaacctcaccatggcagacctgctcttcctggtcactctg
cccctgtggatcatctactactaccatgagggcaactggattcttcccaaattcctgtgc
aacctggctggctgcttcttcttcattaacacctactgctcagtgtccttcctggctgtc
atcacttacaaccgcttccaggccgtgacacggcccatcaagaccgctcaggccaccacc
cgcaagcgtggcatctctttgtccctgatcatctgggtggccatggtggccgccgcctcc
tacttcttcgtcctggactccaccaacatcgagctcagcaagaccggcgcggggaacctc
actcgctgctttgagcattacgagaagggcagcatgcccgtactcatcatccacatcttc
ctcgtgttcagcttcttcctcgtcttcctcgtcattctcttctgcaacctggtcatcatc
cgcacgctgctcacacagtctgtgcagatgcagcgcaatgcagaggtcaagcgccgggca
ctctggatggtctgcacggtcttggctgtgttcatcatctgcttcgtcccccaccacatc
gtgcagctgccctggaccctggccgagctgggcttccagagcggcaacttccatcaggct
attaacgacgcgcatcagatcactctctgcctcctcagtaccaactgtgtcttagacccc
atcatctactgtttcctcaccaagaagttccgcaagcacctttccgagaagttctacagt
ctgcgtggcagccggaaatgctcccgggtcaccacagagacgggcacggaagtggtcgtg
ccactcagccaggtccctgtcaattccctcaaaaagtag
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integrated database retrieval system
