Sus scrofa (pig): 100524087
Help
Entry
100524087 CDS
T01009
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100524087 (UTP20)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100524087 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
DUF7051
Motif
Other DBs
NCBI-GeneID:
100524087
NCBI-ProteinID:
XP_005664260
Ensembl:
ENSSSCG00000000869
LinkDB
All DBs
Position
5:complement(82810700..82913176)
Genome browser
AA seq
2781 aa
AA seq
DB search
MKTKPVSHKTENTYRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIRNSYAYQPLLDLVVQLARDLQM
DFYPHFQDFFLTITSILETQDTELLEWAFTSLSYLYKYLWRLMTKDMSNIYRMYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLDEHPGKVEGVGQLLFEMCKGVRNMFH
SCTEKAVKLILQKLGPVTETEIQLPWILVGETLKNMVKSTALCIHKEHFGIFFECLQESL
LDLHTKVTKTNCGESSEQIKRLLETYLILVKHGNGSKITKPDDVCKVLSQTLQVAHLSTS
CRKTLLDVISALILGDNVSLPETLIKETIEKIFESGFERRLTLDFSEVMFAMKQFEQLFL
PSFLLYIENCFLTDEAAVKDDALAILAKLILNKAAPPTAGSMAIEKYPLLFSRQTVGSYI
RQKKTRSKGGKEQISVLDHLLSIIQLPPNNDTTYLSWSWAALVVLPHIRPLEKEKVIPLV
TGFIESLFVTVDRGSFGKGNLFVLCQAVNTLLSLEESSELLHLVPVERVKNLVLAFPSEP
SVLLLADLYYQRLSLCGCRGPLSEEALMELYPKLQANISTGISKIRLLTIRILNHFEVRL
PELMEDDGLSERQSVFAVLRQAELVPATVNDYREKLLHLRKLRHDVVQTAVPDGPLQEVP
LRYLLGMLYVNFSALWDPVTELISSHAHEMENKQFWKVYYEHLERAATHAEKELQNDTGQ
EEKAIGDARWEQTQEGHVGALYHEQFALKTNLQERLDHTNFRFLLWRALAKFPERVEPRS
RELSPLFLRFINNEYYPADLQVAPTQDLRRKDKGLAAEEMEEEPAAGDDEELEEELEPQD
EPSQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQTVQKITLDC
IMTYKHPHILPYRENLQRLLEDRSFKEEIVHFSISEDNTVVKTAHRADLFPILMRILYGR
MKNKTGSKTQGKSASGTRMSIVLRFLAGTQPEEIQIFLDLLFEPVKHFKDGECHSAVIQA
VEDLDLSKVLPLGRQHGILNSLEIVLKNISHLISSYLPKILQILLCMTATASHILDQREK
IQLRFINPLKNLRRLGIKMVTDIFLDWESYQFRTEEIDAVFHGAVWPQINRLGSESQYSP
TPLLKLISIWSRNARYFPFLAKQKPGHPECDILTNVFAILSAKNLSDATASIVMEIADDL
LSLPDFEPTETVFSLPVTGCIYAESGDESITIGGRLILPHVPAILQYLSKTTISAEKVKK
KKNRAQVSKELGILSKISKFMKDKEQSSLLITLLLPFLHHGNVAQDTEVDILVTVQNLLQ
HCLEPTSFLRPLAKLFSVIKNKLSRQLLCTVFQTLSDFESGLKYITDVVKLNTFDQRHLD
DINFDVRFSAFQTITAYVKEMQTVDVNYLIAVMHNCFYNMELGDMSLSDNASMCLMNIIK
KLAALNVTEKEYREIIHRSLLEKLRKGLKSQTESVQQDYTTLLSCLIQTFPDQPEFKDLV
QLTDCHDPEMDFFENMKHIQIHRRARALKKLAKQLMEGKIVLSSKSLQNYIMPYAMAPIF
DEKMLKHENITIAATEVIGAICKHLSWPAYTYYLKHFIHVLQTGQINQKLGVSLLVIVLE
AFHFDHKTLEEQVRKIQNEENGIEMVALPEREAMEVEHVDEDEKEDKCKTSSDDRGELEH
PDAADCEGTAAKESECITKAVSFLPRNKEELERTIKNIQGTITGDILPRLHKCLASTTKR
EEEHKLIKSKVVNDEEVVRVPLAFAMVKLMQSLPREVMEANLPSILLKVCALLKNRAQEI
RDIARSTLAKIIEDLGVHYLQYILKELQTTLVRGYQVHVLTFTVYMLLQGLTHKLQVGNL
DSCLDIMIEIFNHELFGAIAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGKDQVTKLI
LPLKEILQNTTSLKLARKVHETLRRIIAGLLVNQEMTAESILLLCYGLVSENLPLLTEKE
KNPAAPAPDPRLPPQSCLLLPPTPVRGGQKAVVSKKTNMHIFIESGLRLLHLSLKTSKVK
SSSEHVLEMLDPFVSLLIDCLGAMDVKVITGALQCLIWVLRFPLPSIETKAEQLTKHLFL
LLKDYAKLGAARGQNFHLVVNCFKCVTILVKKVKSYQITEKQLQVLLAYAEEDMYDISRQ
ATAFGLLKAILSRKLLVPEIDDVMRKVSKLAISAQSEPVRVQCRQVFLKYILDYPLGDKL
RPNLEFMLAQLNYEHETGRESALEMIAYLFDTFPQGLLHENCGMFFIPLCLMMVNDDSAS
CKKMASMAIKSLLSKISLEKKDWLFSMVTTWFGAKKSLNRQLAALICGLFVESEGVTFER
RLGTVLPVIEKEIDPENFTDIMEETEEKAADRLLFSFLTLISKLIKECNIIQFTKPSETL
SEIWSHVHSHLRHPHNWVWLTAAQVFGLLFASCQPEELIRKRNVKKAKKKLSEPVAIRFL
TNDLDQKMKSISLASCHQLHSKFLDQSLGEQVVKNLLFVAKVLYLLEPGSGDKQGDIKDD
VEEQEILGDGMTREDVGEHMACADEKEELGKPATLLWLIQKLTRIAKLEAAYSPRNPLKR
TCIFKFLGAIAMDLGMDKVKPYLPVIIAPLFRELNSTYSDQDPSLKNLSQEIIEILKKLV
GLESFSLAFASVQKQANEKRALRKKRKALEFVTNPDIAAKKKLKKHKNKSEAKKRKIEFL
RPGYKAKRQKSHSLKNLAMVE
NT seq
8346 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaagcccgtttcccacaagaccgagaacacgtaccggtttcttacatttgct
gaacgactgggaaatgtgaatatcgatattattcaccgcatcgatagaactgcaagctac
gatgaggaagttgaaacctacttttttgaaggtctgctgaagtggagagaattgaacctt
acggaacactttgggaagttttacaaagaagttattgacaaatgccagtccttcaatcag
ctggtctatcaccaaaatgagatagttcagagtttgaagactcacttgcaaatcaggaac
agttatgcctatcagccccttttagatttggtggtacagttggcacgtgatctgcagatg
gacttctatccccattttcaggattttttcctgaccatcacctcaatcctggagactcag
gacacggagttgttagaatgggccttcacgtcgctgtcctatctgtacaagtacctgtgg
aggctgatgacgaaggacatgtccaacatatacagaatgtatagcacactcctggctcat
aaaaaactacacataagaaattttgctgctgaaagctttacttttttgatgagaaaggtt
tctgataaaaatgcacttttcaatttaatgttccttgatctcgatgaacacccaggaaaa
gtagaaggagttggacagttgctctttgaaatgtgcaaaggagttagaaatatgtttcac
tcctgtacagagaaggcagtgaaactaattttgcaaaagctcggaccagttactgaaaca
gaaattcaacttccatggattttagttggagaaacactcaaaaacatggtcaaatccact
gcactctgcatccacaaggaacattttggtatattttttgaatgtttgcaggaatcactc
ctggatctccatacaaaagtaaccaaaactaactgtggtgaaagttctgagcagattaaa
aggctgttagaaacgtacctgatacttgtaaaacatggaaatggatcaaagataaccaaa
cctgatgacgtttgtaaggtattgtcccaaacattacaagtagcccatctctccacttct
tgccggaagaccctcttggatgtaatttctgccttgatcctaggtgacaacgtctccttg
ccagagaccctcatcaaagaaaccatagaaaaaatttttgagagtggatttgaaagacgc
ttaactttagatttttcggaagtcatgtttgctatgaagcagtttgagcagcttttccta
cccagctttctcttatatattgagaattgcttcctgaccgatgaggctgcagtcaaagac
gatgctctggccattttggccaagcttattctgaacaaagcagcacctcccaccgctggc
tccatggcgattgagaagtaccctctgcttttctcacgacagactgtgggatcctatata
agacagaagaagaccaggtccaagggaggaaaagaacagatctcagtattggatcatctt
ttgtctataattcagttacccccaaataatgatactacttacctttcatggtcttgggca
gcccttgtcgtgttacctcatattagacccctggagaaggagaaggtgatacccctggtc
accggcttcattgagtcactgttcgtgactgttgacagagggagctttggaaaaggaaac
ttatttgttctttgtcaagctgtaaacactctgctgagtttggaagagtcttctgaactc
cttcatctggtccctgtggaacgtgtgaagaacttggtgttagcgtttccttcagagcca
tctgtgttgctgttggctgatctctattatcagagattatccttatgtggctgcagaggg
ccactttcggaggaagctttaatggaattatatcccaagttacaagccaacatttcaact
ggcatatccaagattcggcttttgacaataaggatcctaaaccactttgaggttcggctt
ccggaattaatggaggatgacgggctctcggagcgtcagtctgtctttgctgtactgcgc
caggcagaacttgttccggccaccgtgaacgactaccgagagaagctgcttcatctgcgg
aagctgagacatgatgtggtgcagactgcagtccccgacgggcccttacaggaggtgcca
cttcgttacttactaggcatgttatatgttaacttcagtgctctctgggatcctgttacc
gaactcataagttctcatgcccacgaaatggaaaataagcaattttggaaagtctactat
gaacatctagaaagagcagcaacacatgctgagaaggaactgcagaatgacacaggccaa
gaggagaaggccattggagatgcgcgctgggagcagactcaggaagggcacgtcggagcc
ctttatcacgagcagttcgcattgaaaaccaaccttcaggaaagactggaccataccaat
tttcggtttttactctggcgagctctggcaaaattccccgaaagggtagagccacggtcc
agggagctttccccgctttttttgagatttatcaacaatgagtattacccagcagatctg
caagttgccccaacccaggatctgcgaagaaaagacaaagggctggcagcggaggaaatg
gaagaggaacctgcagctggagatgatgaagagttggaggaagagctggagccccaagat
gaaccctcccagaagaaaaagacaagaagagctgcagcaaagcagttaatcgctcatttg
caagttttctctaaattttcaaacccacgagctttatatctggaatccaaattatatgag
ctatatcttcagttgttgctacaccaagatcaaactgtgcagaagataaccctggattgc
ataatgacatataagcatccacatatcctcccttacagggaaaacttacaaagattgctt
gaagacagaagctttaaagaagagatagtgcattttagcatttctgaagataatacagta
gtgaaaacagcccaccgagcagatctttttcctattctgatgagaattttatatggccga
atgaagaataagactgggagtaaaactcaagggaaatctgcttccggcacccgcatgtcc
attgttctgaggttcctcgccgggacccaacctgaagagatccagatattcttagacctg
ctctttgaacctgtgaagcactttaaggatggagagtgccattctgctgtcatacaagca
gtagaagacttggatttatctaaagttcttcctttaggtcgtcagcatggtatcctaaat
agccttgagatagtattaaagaacattagccatttgatcagctcttacttaccaaagatt
ctgcagatactgctctgcatgactgcaactgcatcacacatccttgaccaacgagaaaag
atacagctgaggtttattaacccactgaaaaatctaagacgccttggaatcaaaatggta
actgatatctttttggattgggagtcctatcagttccgaacagaagaaattgatgccgtg
ttccatggcgccgtctggccccagatcaacaggcttggatctgagagtcagtattctcct
actccactgctgaagttaattagtatctggagcagaaacgcaagatatttccccttcctg
gctaaacagaaacctgggcacccggaatgtgacatcctgaccaatgtttttgcaattctc
tcagcgaagaatctctcagatgccacagccagtattgtgatggaaatagctgatgacctt
cttagccttccagattttgaacccacagaaacagttttcagcttgcctgtaactggatgt
atatacgcagaaagtggagatgagtctatcacaataggaggacgattaattctacctcat
gtacctgcaattctccagtatctcagcaaaaccacaataagtgcagaaaaggtgaaaaag
aagaagaatagagcacaagtcagtaaggaacttggcattctttcaaagatcagcaagttt
atgaaggacaaagagcaaagttctctgctcatcacgctcctccttcctttcctccaccat
ggcaatgtcgcccaggatacagaggttgatattctggtgacagtacagaacctgttacaa
cattgtctggagcctacaagcttcctcaggcctctggcaaaactcttctcggttattaag
aacaagttgtcaagacaactgctttgtacagttttccagaccctttctgattttgagagt
ggattgaaatacattactgatgtcgtcaagcttaacacctttgatcaaagacatcttgac
gatatcaacttcgatgttcgcttctcagcatttcaaaccatcaccgcttatgtgaaagag
atgcaaaccgtggatgttaactacctaattgcagttatgcataattgtttctataacatg
gagttaggagacatgtctttaagtgataatgcgagcatgtgcttgatgaatatcatcaaa
aagcttgctgccttgaatgtcacagagaaagagtatagagaaatcattcatcgttcactc
ctggagaaactgaggaaaggactgaagagccagacagagagtgttcaacaggattatacc
acactgctttcctgtttaattcagaccttcccagatcaaccagaatttaaagacttggta
cagcttactgattgtcatgacccagaaatggacttctttgagaatatgaagcacattcag
atccacagacgagcaagagccttgaagaaactggcaaaacaactaatggaaggcaaaatc
gtgctgtcttctaaatctcttcagaattacatcatgccttatgctatggctcccattttt
gatgagaaaatgctcaagcatgaaaatataaccattgctgccacagaggttattggagct
atttgcaagcacctctcttggccagcatatacatattacttgaaacatttcattcatgtc
ttacagacgggacagatcaatcaaaagttaggtgtcagtttgctagtgatagtgttagaa
gcattccactttgaccacaaaactcttgaagaacaagtaagaaaaattcagaatgaagaa
aatggcatagaaatggtggcattgccagagcgtgaagccatggaagtagagcacgtggat
gaggacgagaaggaagataaatgtaagacttcatcagacgaccgtggggagctggaacac
cccgacgcagcggattgtgaggggacagcagctaaggaatccgagtgtatcacaaaggcc
gtctctttccttcctcggaataaggaagaattagagagaacaattaaaaatatccaagga
accataactggggacatcctacccaggctccataaatgcctggcgtctacgaccaaaagg
gaagaagaacacaagctcataaaatccaaggttgtgaatgatgaggaagtggttcgagtg
cctttagcctttgccatggttaaactaatgcagtcccttccacgagaagttatggaagct
aatctgccaagtattttgctgaaagtgtgtgccctcctcaagaacagagcacaggaaatc
agagacattgcacgcagcactcttgcaaaaataatagaggatctgggtgtgcattatcta
caatatattttaaaagagttacagactacccttgtccgtggctatcaggtccatgtgcta
actttcactgtttacatgctgctgcaaggcctcacccataagcttcaagtcgggaatttg
gactcttgtttggatataatgattgagatttttaaccatgagttgttcggtgccatcgct
gaagagaaagaagtaaagcagatcctctcgaaagtcatggaggcacgaagaagcaagagt
tatgattcttacgaaatcttgggcaagtttgtaggaaaagatcaggttacaaaacttatt
cttccactgaaagagatcttacaaaataccacgagtttaaaactggcccggaaagttcac
gagaccttacgccgaatcatagcaggattgcttgtaaaccaggaaatgacggcagaatcc
attctgttgctttgttacggtttggtcagcgaaaatctccccctgttaacagaaaaagaa
aaaaatcccgcagcccctgctccagatccacgtctgccaccccagagctgtcttctgctt
cccccaactccagttcgaggcgggcagaaagctgttgtgagcaagaagaccaacatgcac
atatttattgagtctgggcttcggctgttgcatcttagcttgaagacttccaaggtcaag
tcttcaagtgaacacgttctggaaatgttggatccttttgtgtctctcctcatagactgc
ctgggcgccatggacgtgaaggtgatcacaggtgctctgcagtgtctgatctgggtcttg
aggttccccctgccttccatagaaacgaaagcagaacagctgacaaaacaccttttcctt
ttgctgaaggactatgccaaactgggtgctgccaggggccagaacttccacttagtggta
aactgtttcaagtgtgtgaccatacttgtgaagaaagtgaagtcgtaccagataactgaa
aagcagcttcaggttctactcgcatacgctgaggaggacatgtatgatatttcaagacaa
gccaccgcattcggtcttctgaaggccattttatcaagaaagttgttggtcccagaaatt
gatgatgtcatgcggaaggtatccaagttggcaatttctgcacagagtgaacctgtccga
gtccagtgcagacaggtttttctgaaatacattcttgattatcctctgggtgacaaattg
agaccaaacttggaattcatgcttgctcagctaaattatgaacacgagaccgggagagag
tccgccttggaaatgatcgcttatctctttgacacattccctcagggactgctgcacgag
aactgtggcatgttctttattcctctttgcctaatgatggtgaacgatgactctgcctcg
tgtaaaaagatggcatccatggcaatcaaatccttactcagtaaaatcagccttgagaag
aaagattggctcttcagtatggttaccacctggtttggggccaagaagagcttaaataga
caactagctgccctgatttgtggattgtttgtggaaagcgaaggagtcacttttgagaga
agacttggaactgttctccctgtgattgaaaaggaaattgatcctgaaaactttacagat
atcatggaagagactgaagaaaaagctgcagatcgccttctgtttagttttcttacactg
ataagtaaactcatcaaggaatgtaatattattcagtttaccaagccctctgagactcta
agtgaaatctggagccacgtgcactctcacctgagacatccgcacaactgggtctggctc
accgcagcccaggttttcggattgctctttgcctcttgccaaccagaggaactcatcaga
aaacggaatgttaaaaaagccaaaaagaaactctcagaaccggtagcaatcagattcctc
acaaatgatcttgaccaaaagatgaaaagtatctccttagcgtcttgccatcaattgcat
tccaaattcttggatcaatctctaggagagcaggttgttaagaatttgttgtttgtagct
aaagtcttgtatttactggaacctggttctggagataagcaaggtgacataaaagatgac
gtggaagaacaagaaattttaggtgacggcatgaccagagaggatgtgggagagcacatg
gcctgtgcagatgagaaggaagagcttggcaagccagccacgctgctgtggttgattcag
aagttgacccgaatcgcaaaactggaagctgcttattcaccaagaaaccccttaaagaga
acttgcatctttaagtttcttggagccatagccatggatcttgggatggacaaggtgaag
ccgtatctcccagtgatcatcgctcctttgttccgggagctgaacagcacctattcggac
caggatccttcactgaagaatctatcccaggaaatcatagaaatactgaaaaagctggtt
gggcttgagagcttctcattagcctttgcctctgtacagaaacaggctaatgagaaaagg
gcactccggaaaaagaggaaggctttagagtttgtgactaatcctgatattgccgcgaag
aaaaaactaaagaaacacaaaaataaaagtgaagcaaagaagagaaagatagagttccta
cgtccaggatataaggccaagagacaaaagagccacagcctaaaaaatttagcaatggtg
gagtaa
DBGET
integrated database retrieval system
