Sus scrofa (pig): 100524183
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Entry
100524183 CDS
T01009
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100524183 (RTF1)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
100524183 (RTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
100524183
NCBI-ProteinID:
XP_020953105
Ensembl:
ENSSSCG00000004747
LinkDB
All DBs
Position
1:complement(129886798..129942845)
Genome browser
AA seq
716 aa
AA seq
DB search
MRGRLCVGRAAAAAAAAAAAAAVAVPLAGGQEGSPGGVRRGSRGTTMVKKRKGRVVIDSD
TEDSGSDENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSNSDDEWTFGSNKNKKK
GKARKIEKKGTMKKQANKTASSGSSDKDTSAESSAPEEGEVSDSDSNSSSSSSDSDSSSE
DEEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKKRFEIRKKLKTAKKK
EKKEKKKKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKN
RTAELLAKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVS
LPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGVVETAKV
YQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINK
KELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQ
IQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHNMKNQQMDPF
TRRQCKPTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKEMSKGQGKDKDLNSKSASDL
SEDLFKVHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNLEDYKKRRGLI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgcctttgtgtgggtcgagcagcagcggcggcggcggcggcggcggcagca
gcagcagtggcggtcccactggcaggcgggcaagaggggagtccaggcggcgtccggcgt
gggagccgggggaccacgatggtaaagaagcggaaaggccgcgtcgtgatcgactcagac
acggaggacagcggcagcgacgagaacctggatcaggagctcttgtccctggcaaagcgg
aagcgaagtgactctgaagagaaggagccgcctgtgagtcagcctgcagcctcctcagac
tccgaaacgtccaacagcgatgatgagtggacttttgggagcaataaaaataagaaaaaa
ggaaaagccagaaaaatagagaagaaaggaaccatgaagaaacaggccaacaaaactgct
tcctcaggcagttcggacaaagacacttcagctgagagctcagcccctgaggaaggtgaa
gtgtcagattctgacagcaatagctcctcctccagttcggattcagactcttcctcagaa
gatgaggagttccatgatggctatggagaagacctcatgggagatgaggaagatagggct
cgtctggaacagatgacagaaaaagagagagagcaagagctattcaaccgcatagagaag
agggaggtgctgaaaaaaagatttgaaatcaggaaaaaactgaaaacagccaaaaagaaa
gaaaagaaagaaaaaaagaaaaagcaagaagaggagcaggaaaagaaaaagctgacacag
attcaagaatctcaggtgacatcccacaacaaggaacgacgttccaaaagggatgagaaa
ctagataagaaatctcaagccatggaggagctaaaagcagagcgagaaaaacggaagaac
agaacagctgagctcctcgccaagaaacagccattaaaaaccagtgaggtgtactctgac
gatgaggaagaggaggaagatgacaagtccagtgagaagtcagaccgctcatcccgaaca
tcgtcatctgatgaagaagaggagaaggaagagatccctccaaaatcacaaccagtctcc
ttacctgaggagttgaatcgggttcgattatcacggcataagctggaacgttggtgtcac
atgcccttcttcgctaaaactgtcacaggatgttttgtgcggattggcattggaaaccac
aacagcaaaccagtttaccgggttgccgagatcactggtgttgtggaaactgccaaagtt
taccagctcggtggcacccggacaaacaaagggctacaactaaggcacggcagtgaccaa
cgagtgttccgcctggagtttgtctcaaaccaagaattcactgaaagtgaattcatgaag
tggaaagaagcgatgttctctgctggcatgcagttgcccactctagatgaaatcaataag
aaggaattatctattaaagaagctcttaattataaattcaatgaccaggacattgaagag
attgtaaaagagaaagaaaggttcaggaaagctccgcccaactacgctatgaagaagaca
cagctgctgaaggaaaaggccatggctgaagacttgggggatcaggacaaagccaaacaa
atccaagaccagctgaacgagctggaggagcgggcagaggccctggatcgccagcggacc
aagaacatatctgctatcagttacatcaaccagcggaaccgggagtggaacattgtggag
tctgagaaggcccttgtggctgaaagtcacaacatgaagaaccaacagatggatcccttt
accaggcgacagtgtaaacctaccatcgtttctaattccagagacccggctgttcaagct
gccatattggcccagctgaacgcaaaatacggttctggcgtgttaccagatgctccaaag
gaaatgagcaagggtcagggaaaagataaagatttgaattccaagtcagccagcgacctc
tcagaagacttgtttaaagtacatgatttcgacgtgaagattgatttacaagttcccagc
tcagagtcaaaggctttggccatcacctccaaggctccgccggccaaggatggggctcca
aggagatctctgaacttggaagactacaaaaaacgacgggggcttatttga
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