Sus scrofa (pig): 100524203
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Entry
100524203 CDS
T01009
Symbol
PATJ
Name
(RefSeq) inaD-like protein isoform X1
KO
K06092
InaD-like protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04390
Hippo signaling pathway
ssc04530
Tight junction
ssc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100524203 (PATJ)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100524203 (PATJ)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100524203 (PATJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
Motif
Other DBs
NCBI-GeneID:
100524203
NCBI-ProteinID:
XP_020952216
Ensembl:
ENSSSCG00000024266
LinkDB
All DBs
Position
6:complement(150248714..150605565)
Genome browser
AA seq
1906 aa
AA seq
DB search
MPENPATDKLQVLQVLDRLKMKLQEKGDTSQNEKLSLFYETLKSPLFNQILTLQQSIKQL
KGQLSHIPSDCTANFDFSRKGLLVFTDGASTSGNAHRSTNNQSVSGLFPWTTKLGNEDFS
SIMQQMAQGRHIESIDIERPSTGGLGFSVVALRGQNLGEVNIFVKEVQPGSIAGRDQRLK
ENDQILAINHTPLDQNISHQQAIALLQQTTGSLHLVVAREPVHTKSSASTSLTDVTLPET
VRWGHIEDVELVNDGSGLGFGIVGGKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTN
VQGMTSEQVAQVLRNCGNSVRMLVARDPIGEVSVTPPTPAALPVALPAVANRSPGSDSST
PCETYDVELIKKDGQSLGIRIVGYVGTTHTGEASGIYVKSIIPGSAAYHNGQIQVNDQII
AVDGVNIQGFANQDVVEVLRNAGQVVHLTLIRKRTSSSASPLEGNSDRGTVVEPLKTPAL
FLTGAVETETNLDEDEETEERIDNLKNDNIQALEKLEKVPDSLENELKSRWENLLGPDYE
VMVATLDTQIADDAELQKYSKLLPIHTLRLGMEVDSFDGHHYISSIAPGGPVDTLNLLQP
EDELLEVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRRLFDDEASVDEPRTTEASLPAME
ANRNIDVHTEEDDDGELALWSPEVKTVELVKDHKGLGFSILDYQDPLDPTRSVIVIRSLV
PDGVAERGGELLPGDRLVSVNEYCLDNTTLAEAVEVLKAVPPGTVRLGICKPLVEEKEEE
SNILYSNNNEDKTETSGTIHGLNSSLILEAPKGFRDEPYFKEELVDEPFLDLGKAFQSQQ
KEIDTSKEAWEMHEFMAPRMQEMGEEREMLVDEEYELYQDHLQSMESYPSPHIQEAAPVP
SMKELHFGAQWFCDHELPEPQEARSVMSVYSQEMQQCGYSAENTMKENVGIDSLPSMSST
EGNSPRGRFDDLENLNSLTKSSLDLGMMIPTDVQGPGLLVELPAVAQRREQEDLPLYQLP
RTQAVSKASAYTGILSSRYATDPCELPEREEGEGEETPNFSHWGPPRIVEIFREPDVSLG
ISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGIDLQNASHKE
AVEAIKNAGNPVVFVVQSLSSTPRVIPSAHNKTNKIANNQDKNTQEKKEKRRGTAPPPMK
LPPPYKAPSDDSDETEEEYAFTNKKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRS
RMSIFVVGINPEGPAAKDGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIR
NEDAVNQMAVTPFPLPSSSPSSIEDQSGTELVGSEEDGSVEVGIRQLPESASSKLEDISQ
AAGQGVVTGQQKAPECPTDNAGSQSKQQKYSTKVSFSSQEIPLAPASYHSTDADFTGYGG
FQAPLSVDPATCPIIPGQEMIIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARD
GRLWAGDQILEVNGIDLRSASHEEAITALRQTPQKVRLVVYRDEAHYRDEENLEVFPVDL
QKKAGRGLGLSIVGKRNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRSASQETV
ATILKCAQGLVQLEIGRLRAGSWTSSRKTSQNSQGSQNSTHSSFPPSLAPVITSLQNLVS
SKRPSDPSPKGSGTDVGPRTVEIIRELSDALGISIAGGKGSPLGDIPIFIAMIQASGVAA
RTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNAYGRIILQVVADTNISAIATQLENMST
GYHLGSPTTEHHPEDTETPPPKIITLEKGSEGLGFSIVGGYGSPHGDLPIYVKTIFAKGA
AADDGRLKRGDQILAVNGETLEGVTHEQAVAILKHQRGTVVLTVLS
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaatcctgctacagataaactgcaggtcctgcaagttctcgatcgcttgaaa
atgaaactgcaggagaaaggtgacacttcgcagaatgagaagttgtctctgttttatgag
acactaaagagccctctcttcaaccagatactcacactccagcagtccatcaagcagctg
aaggggcaactcagccatattccctcagattgtacagccaactttgatttttctaggaaa
gggttattggtattcacggatggtgccagtactagtgggaatgcccacaggtccactaat
aaccagagtgtatctgggttatttccttggaccacaaagttgggaaatgaagattttagc
tctatcatgcaacagatggcccagggccggcacattgaaagtatagatatagaacggccc
tcaactggaggccttggattcagtgtggtggcccttagaggtcaaaacctgggcgaagtc
aatatctttgtgaaggaggtgcagccggggagtatcgctggcagggatcagaggttaaag
gaaaatgaccaaatattggctattaatcacacgccattggatcagaacatttcccatcag
caagcaattgcattattacaacagaccactggatctttgcatctggttgtggccagggaa
ccagtccacaccaaaagcagtgcttctaccagcctaactgatgtaactctgcctgaaaca
gttcgttggggccatattgaagatgttgaactcgttaacgatggctctggattggggttt
ggaatagttggaggaaaatcaagtggtgtcgttgtgaggactatagttcctggaggatta
gcagatcgagatggcagactccagaccggggatcacatcttgaagattggtggcacaaat
gtgcagggaatgaccagtgagcaagttgcacaagtgctaaggaactgtgggaattctgtc
aggatgcttgtggcaagagatccaattggtgaagtttccgtaacccctcctacccctgca
gccttacctgttgccctgcctgctgtagccaacaggagccctggttctgacagttctact
ccctgtgaaacttatgatgttgaacttattaaaaaagatggacagagtcttgggattaga
attgttggctatgttggaactactcatacaggagaagcttcagggatttatgtgaaaagt
ataatacctggcagtgctgcataccacaatggccaaattcaagtgaatgaccaaataatt
gctgtcgatggtgtgaatattcagggttttgccaaccaggatgttgttgaagtgttacga
aatgcagggcaagtggtgcacctaaccctgattcgaaagaggacatcttcatctgcttct
cctcttgaagggaactcagacagaggaactgtggtagaaccactgaaaacaccagccctc
tttctgactggagcagtggaaacagaaactaatttggatgaagatgaggaaactgaagaa
agaatagataatctaaaaaatgacaacatacaagccttagaaaaactggaaaaagtccca
gactctctagaaaatgagctgaaatccagatgggaaaacctattgggccctgattatgaa
gtaatggttgctactttggacacacagattgcagatgatgctgagttacagaagtattca
aagctgctgcccattcacactctgaggcttggcatggaagtggattcctttgatgggcac
cattacatctcttcgatcgctccaggtggtcctgttgataccctgaacctcctacagcca
gaggatgagcttcttgaggtcaatggcgtgcagctttatgggaaatctcgccgagaagca
gtctcctttcttaaagaagtgccacccccctttaccttggtttgctgtcgacggttgttt
gatgatgaagcctctgtagatgagccaaggaccacggaagcctctcttcccgcaatggag
gccaaccgcaatatagatgtccatactgaagaagatgatgatggggaattagcactgtgg
tctcctgaagtcaagactgttgaactagtgaaagatcacaaaggcttgggattcagcatt
ttggattaccaggaccccttagatcccacaagatcagtgattgtgattcgctccctggta
ccagatggtgtggcagaaagaggtggagaacttttacctggagaccgcctggtctcagtc
aatgaatactgtttggacaataccacccttgctgaagctgtagaagtgctgaaggctgtg
ccaccaggcactgtacgccttggcatctgtaagcctttggtggaagaaaaagaggaagaa
agtaatattttatattcaaacaataatgaagacaagactgaaacttcaggaacaattcat
ggtctaaattcatctttaatacttgaagcacccaagggctttagagatgagccttatttt
aaagaagaacttgtggatgagccatttctagatttgggaaaggctttccagtcccaacaa
aaagagatagacaccagcaaggaggcctgggaaatgcacgaatttatggctcccagaatg
caggaaatgggcgaagaaagagaaatgcttgtcgatgaagaatatgagctgtatcaagac
caccttcagtccatggagtcgtatccttcaccgcacattcaggaggccgctcctgttcca
tccatgaaggaacttcactttggtgcacagtggttctgtgatcatgaactgcctgagcct
caggaagcaagatctgtgatgagcgtgtattcccaggagatgcagcagtgtggctatagc
gctgaaaacacgatgaaagaaaatgttggcattgattccctaccctccatgtcgtcaacg
gaaggaaacagtccacgaggcagatttgatgatctggaaaatcttaattcattaacaaaa
agcagtctggatttaggcatgatgattcccaccgatgtccagggtcctggcttgcttgtt
gaacttcctgctgtagctcaaagaagggagcaagaagatttgcctctgtaccaactcccc
aggactcaagctgtttccaaagcctcagcatatacaggaatattgtcttctagatatgcc
actgatccatgtgaattacctgagagggaagaaggtgaaggagaagaaacgccaaacttc
agccactggggaccaccaagaattgttgagatttttagagaaccagatgtatctcttggc
attagtattgttggtggacaaacggttataaaacgcctaaagaatggagaggagcttaaa
ggtatatttatcaaacaagttttggaagacagtccagcaggaaaaacaaatgcccttaaa
actggagataaaatacttgaggtgtctggaatagatttgcagaatgcctcacacaaagaa
gcggttgaggccattaagaatgcaggaaaccctgtggtgttcgttgttcagagcttgtca
tctactccaagagttattcctagtgcgcacaataagaccaacaaaattgctaataaccag
gacaagaacactcaagaaaaaaaagaaaagaggcgaggaactgctccacctccaatgaaa
ctgccgcctccttataaagctccatctgatgacagtgatgagactgaagaagaatatgca
tttaccaataaaaaaattaggcaaaggtatgcagacctgcctggagaattgcatattatt
gaactcgaaaaggataaaaatggacttggactcagccttgctggtaacaaagacagatca
cgcatgagcatattcgtggtgggaattaacccggaaggacctgctgccaaggacgggcga
atgcgtatcggagatgaactgttggagataaacaatcagatcctgtatggaagaagtcac
caaaatgcatctgccattattaagactgccccctcaaaggtcaagctggttttcatcaga
aacgaagatgcggtcaatcagatggccgttactccctttccattgccgtcaagttctcct
tcttctattgaggatcagagtggcactgaactggttggtagtgaggaagacggcagtgtc
gaagttggtattaggcaattgcctgaaagtgcaagctccaaactggaagacatctcccag
gcagctggtcaaggtgtggtgacaggtcagcagaaggcaccagaatgtccaactgacaat
gctggcagccaaagtaaacagcagaaatattcaacaaaggtctccttcagttcacaagag
atccctttagcaccagcttcataccattcaacagatgcagacttcacaggctatggtggt
ttccaggctcctctgtcagtggaccctgccacatgtcccattattcccggccaagaaatg
attatagaaatatccaagggacgttcggggcttggtctcagcatcgtgggaggaaaagac
acacccttggatgctatagttatacacgaagtctatgaagaaggggcagcagcccgagat
ggaagactttgggctggtgaccagatattagaggttaacgggattgacctcagaagcgcc
agccacgaagaagccatcacagctctgaggcagaccccccagaaggtacgactggtggtg
tatagagatgaggcccactatagggatgaggagaacttggaggtttttcccgtggatctt
cagaagaaggccggccgaggactgggcctgagcatcgttgggaaacgaaatggaagtgga
gtgtttatttctgacatcgtgaaaggtggagccgcagaccttgatgggaggttgattcag
ggagatcagatcttatctgtgaatggggaggacatgagaagtgcctcccaggagacagtg
gccactatcctcaagtgtgcacaggggcttgtgcagctagagattggaagactgcgagct
ggttcctggacctcctcgaggaagacatcgcaaaacagtcaggggagtcagaacagcaca
cacagcagctttcctccttcccttgctcctgttatcaccagcctgcaaaacctggtcagc
tcaaaaagaccttcggatccttccccaaaaggctcaggcacagatgtgggaccaaggact
gttgagataatcagagagctcagtgatgcccttggaatcagtattgctggaggaaaagga
agtcccttaggagacataccaatatttattgccatgattcaggccagcggcgtggctgca
cgtacacagaagcttaaagttggagatcggattgtcagcattaatgggcaacctctggat
gggctgtctcacgcggatgtggttaatctgctgaagaacgcctacgggcgcattatcctg
caggttgtagcagataccaatataagcgccatagcaactcaacttgaaaacatgtccacg
ggctatcaccttggttcacccactactgagcaccatccggaggacacagaaacacctcca
cctaagattattactttggagaaaggctctgaaggattggggtttagtattgtagggggt
tatggaagtccccatggagacctgccaatttatgtcaagactatatttgcaaagggagca
gctgcagatgacggccgattgaagcgaggtgatcagattttagcagttaatggcgagact
ctggaaggcgttactcatgagcaagccgtggccattcttaaacaccagagagggactgta
gtcttaactgtgctgtcatga
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integrated database retrieval system