Sus scrofa (pig): 100524236
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Entry
100524236 CDS
T01009
Symbol
NRXN2
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin-2-beta
KO
K07377
neurexin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100524236 (NRXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100524236 (NRXN2)
Membrane trafficking [BR:
ssc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
100524236 (NRXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
100524236
NCBI-ProteinID:
XP_020938532
Ensembl:
ENSSSCG00000013024
LinkDB
All DBs
Position
2:7454771..7554180
Genome browser
AA seq
1599 aa
AA seq
DB search
MVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTVKYEP
PFRGLLANLKLGERPPALLGSQGLRGAAADPLCXPARNPCANGGLCTVLAPGEVGCDCSH
TGFGGKFCSEEEHPMEGPAHLTLNSEVGSLLFSEGGXGRGGAGDVHQPTKGKEEFVATFK
GNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGKSADYVNLSLKSGAVWLVINLG
SGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGIGHAMVNKLHYLVTISVDGILTTTGY
TQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNNDFKLELSRLAKEGD
PKMKLXGDLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNGLLLFS
QGRRAGAGASSHSTAQRADYFAMELLDGYLYLLLDMGSGGIKLRASSRKVNDGEWCHVDF
QRDGRKGSISVNSRSTPFLATGESEILDLESELYLGGLPEGGRVDLPLPPEVWTAALRAG
YVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCASAPCRNGGLCREGWNRFV
CDCIGTGFLGRVCEREATVLSYDGSMYMKIMLPNAMHTEAEDVSLRFMSQRAYGLMMATT
SRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFAGHKLNDNEWHTVRVVRRGK
SLQLSVDNVTVEGQMAGAHTRLEFHNIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYM
DQCKDGDITYCELNARFGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDG
LLLFNSGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNV
HTLKIDSRTVTQHSNGARNLDLKGELYIGGLSKNMFNNLPKLVASRDGFQGCLASVDLNG
RLPDLIADALHRIGQVERGCDGPSTTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCN
DPGTTYIFGKGGALITYTWPPNDRPSTRMDRLAVGFSTHQRSAVLVRVDSASGLGDYLQL
HIDQGTVGVIFNVGTDDITIDEPNAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAG
NFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQAAIKIGGRDQGRPFQGQVSGL
YYNGLKVLALAAESDPNVRTEGHLRLVGEGPSVLLSAETTATTLLADMATTIMETTTTMA
TTTTRRGRSPTLRDSTTQNTDDLLVASAECPSDDEDLEECEPSTGGELILPIITEDSLDP
PPVATRSPFVPPPPTFYPFLTGVGATQDTLPPPAARRPPAGGPCQAEQDDSDCEEPIEAS
GFASGEVFDSSLPPTDDEDFYTTFPLVTDRTTLLSPRKPAPRPNLRTDGAKGAPGVLLAP
SAPAPNLPAGKMNHRDPLQPLLENPPLGPGAPTSFEPRRPPPLRPGVTSAPGFPRLPTAN
PTGPGERGPPGAVEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDQS
RNYISNSAQSNGAVVKEKAPAAPKTPSKAKKNKDKEYYV
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgttgacccgcgacgcacgccgcacggccctggcggtggacggagaggcccgt
gccgccgaggtgcgctccaagcggcgggagatgcaggtggctagcgacctgttcgtggga
ggcatcccacccgacgtgcgactctcggcgctcacgctcagcacagtcaagtacgagccg
cccttccgcggcctcctggccaacctgaagctgggcgagcgaccccccgcgctgctgggc
agccagggcttgcgcggcgccgccgccgacccgctgtgcngccccgcgcgcaacccctgt
gccaacggtggcctctgcaccgtgctggcccccggcgaggtgggctgcgactgcagccac
acgggcttcggcggcaagttctgcagcgaagaggagcaccccatggaaggtccggctcac
ctgacgttaaacagcgaagtagggtccttactgttctccgagggggggnccgggagagga
ggagccggcgatgtgcaccagccgacaaaaggcaaggaggagtttgtggcaaccttcaaa
ggcaatgagttcttctgctacgacctctcacacaacccgatccagagcagcacggacgag
atcacgctggcctttcgcaccctgcagcgcaacgggctgatgctgcacacgggcaagtcg
gccgactacgtcaacctctccctcaagtccggggccgtctggctggttatcaacctgggc
tcgggagcctttgaggcccttgtggaacccgtcaatggcaagttcaacgacaacgcctgg
cacgacgtccgggtcacccgaaacctgcgccagcacgcaggcattggacacgctatggta
aacaaactgcattatctggtgaccatctccgtggacgggatcctgaccaccaccggctac
acgcaggaggattacaccatgctgggctctgacgacttcttctacatcgggggcagcccc
aacacggccgacctgccgggctcgcccgtcagcaacaacttcatgggctgtctcaaggat
gtggtctataagaataacgactttaagctggaactgtcccgcctggcaaaggaaggagac
cccaagatgaagctgncaggggacctgtcattccgctgtgaggacgtggcggccctggac
cctgtgaccttcgagagccctgaggccttcgtggcgctgccccgctggagcgccaagcgc
actggctccatctccctggacttccgcaccactgagcccaacgggctgctgctcttcagc
cagggccggcgggccggggccggggccagcagccacagcactgcccagagggccgactac
tttgccatggagctgttggacggctacctctaccttctgctggacatgggctcggggggc
atcaagcttcgggcctccagccgcaaggtcaatgacggcgagtggtgccacgtggacttc
cagagggacgggcgcaaaggctccatctcggtgaacagccgcagcacgcccttcttggcc
accggggagagcgagatcctggacctggagagcgagctctacctgggcggtctccctgag
ggcgggcgggtggacctgcccctgcccccggaggtgtggacggcggcgctccgggccggc
tacgtgggctgcgtgcgggacctcttcatcgacgggcggagccgcgacctccggggcctg
gcggaggcgcagggggctgtgggcgtggcccccttctgctcccgggagacgctgaagcag
tgcgcctcggctccctgccgcaacgggggcctctgccgagagggctggaaccgcttcgtc
tgcgactgcatcgggaccggcttcctggggcgggtgtgtgagagagaggctacggtcctg
agctacgacggctccatgtacatgaagatcatgctgcccaacgccatgcacaccgaggcg
gaggacgtgtctctgcgtttcatgtcccagcgcgcctacgggctcatgatggccaccacc
tccagggagtccgctgacaccctgcgtctggagctggacgggggccagatgaagctcact
gtcaacctcgactgcctgcgcgtcggctgcgcacccagtaaagggcccgagacgctcttt
gcggggcacaagctcaatgacaacgagtggcacacagtgagggtggtgcggcgtggcaag
agcctgcagctgtccgtggacaacgtgaccgtggagggacagatggccggagcccacacg
cggctggagttccacaacattgagacaggcatcatgacggagcggcgtttcatctccgtg
gtgccctccaacttcatcgggcacctgagcgggctggtgttcaatggccagccctacatg
gaccagtgcaaggacggcgacatcacctattgcgagctcaacgcccgctttggcctgcgt
gccatcgtggctgatcccgtcaccttcaagagtcgcagcagctacctggcgctcgccacg
ctccaagcctacgcctccatgcacctcttcttccagtttaagaccacggcccccgacggg
ctccttctgttcaactcgggcaacggcaacgacttcattgtcatcgagctggtcaagggg
tacatccactacgtgtttgacctggggaatggcccgtccttgatgaaggggaactcagac
aaaccagtcaatgacaaccagtggcacaacgtggtggtgtcccgggacccaggcaacgtg
cacacgctcaagattgactcccgcactgtcacgcagcactccaatggcgcccgaaacctc
gatctcaaaggggagctgtacattggcggtctgagcaagaacatgttcaacaacctgccc
aagctggtggcctcccgggatggctttcagggctgcctggcctcggtggacctcaatggg
cgccttccggacctcatcgccgacgccctgcaccgcatcgggcaggtggagaggggctgt
gatggccccagcaccacctgcaccgaagagtcttgtgccaaccagggcgtctgcttgcag
cagtgggacggcttcacctgcgactgcaccatgacctcctacggaggccctgtctgcaat
gaccccgggaccacatacatctttgggaaagggggggcgctcatcacctacacgtggccc
cccaatgaccggccgagcacgaggatggaccgcctggccgtgggcttcagcacgcaccag
cggagcgccgtgctggtgcgggtggacagcgcctccggcctcggggactacctgcagctg
cacattgaccagggcaccgtgggggtgatctttaacgtgggcacggatgacattaccatt
gacgagcccaacgccatcgtgagtgacggcaaataccacgtggtgcgcttcactcgaagc
ggcggcaacgccaccttgcaggtggacagctggccagtcaacgagcggtacccggcagga
aactttgataacgagcgcctggcgattgctagacagagaatcccctaccggcttggtcga
gtagtagatgagtggctgctcgacaaaggccgccagctgaccatcttcaacagccaggct
gccatcaagatcgggggccgggatcagggccgccccttccagggccaggtgtccggcctc
tactacaatgggctcaaggtgctggcgctggccgccgagagcgaccccaatgtgcggact
gagggccacctgcgcctggtgggggaggggccgtccgtgctgctcagtgcggagaccacg
gccaccaccctgctggccgacatggccaccaccatcatggagaccaccaccaccatggcc
accaccaccacgcgccggggccgctcccccacgctgagggacagcaccacccagaacaca
gatgacctcctggtggcctcggccgagtgtccgagtgatgacgaggacctggaggagtgt
gagcccagtactggaggagagttaatattgcccattatcacggaggactccttagacccc
cctcccgtggccacccgatcccccttcgtgcccccaccccccaccttctaccccttcctc
acgggcgtgggtgccacccaagacaccctgcccccgcctgcggcccgccgcccgcccgcc
gggggcccgtgccaggccgagcaggacgacagcgactgcgaggagcccatcgaggcctcg
ggctttgcctctggagaggtctttgactccagcctcccccccacggacgacgaggacttt
tacaccacgtttcccctggtcacggaccgcaccaccctcctctccccccgcaaacccgct
ccccggcccaacctcaggacagatggggccaagggcgcccctggggtgctgctcgccccc
tccgccccggcccccaacctgccagcgggcaaaatgaaccaccgagacccgctgcagccc
ctgctggagaacccacccctggggcccggggcccccacgtccttcgagccgcggaggccc
cctccgctgcgccccggcgtgacctctgcccctggcttcccccgtctgcccacagccaac
cccacggggcctggggagcggggcccgccgggcgcagtggaggtgatccgggagtccagc
agcaccacgggcatggtggtgggcatcgtggcggccgcggcgctctgcatcctcatcctc
ctctatgccatgtacaagtaccgcaaccgcgacgagggctcctaccaggtggaccagagc
cggaactacatcagtaactcggcccagagcaacggggccgtggtgaaagagaaggcgccg
gcggcccccaagacgcccagcaaggccaagaagaacaaagacaaggagtattacgtctga
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integrated database retrieval system
