Sus scrofa (pig): 100524240
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Entry
100524240 CDS
T01009
Symbol
MCOLN1
Name
(RefSeq) mucolipin-1 isoform X3
KO
K04992
mucolipin 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04020
Calcium signaling pathway
ssc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100524240 (MCOLN1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100524240 (MCOLN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100524240 (MCOLN1)
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100524240 (MCOLN1)
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Gene cluster
GFIT
Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
Motif
Other DBs
NCBI-GeneID:
100524240
NCBI-ProteinID:
XP_003480856
Ensembl:
ENSSSCG00000013570
UniProt:
F1SCJ4
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Position
2:complement(71602888..71613331)
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AA seq
580 aa
AA seq
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MAVPVGPRGSETEHLLTPSPGYGTQAGASPAPETPPEEEDLRRRLKYFFMSPCDKFRAKG
RKPFKLMLQVVKILVVTVQLILFGLSNQLAVTFREENTIAFRHLFLLGYSDGADDTFAAY
TREQLYQSIFYAVDQYLLLPDMSLGRYAYVRGGGGPWANGSALALCQCYYHRGHVDPAND
TFDIDPMVVTDCIRVDPPERPPVPPSDDLGLSDGSTSYKNLTLKFHKLINVTIHFQLKTI
NLQSLINNEIPDCYTFSILITFDNKAHSGRVPISLETQAHIQECKHPSVFGHGDNSFRLL
FDVVVILTCSFSFLLCARSLLRGFLLQNEFVRFIRRKRGRVVSLWERLEFVNGWYILLVT
SDVLTISGTIMKIGIEAKNLASYDVCSILLGTSTLLVWVGVIRYLTFFHKYNILIATLRV
ALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAM
QAQQGRSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGTGAEESELQAY
IAQCQDSPTSGKFRRGSGSACSLLCCCGRDASEEHSLLVN
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcagtccccgtaggcccgcgcggctcagagactgagcacctcctgacacccagccct
gggtatgggacccaagcgggagcttccccagcccctgagacccctccagaagaggaagac
ctccgccggcggctcaagtacttcttcatgagtccctgtgacaaatttcgggccaagggc
cgcaagcccttcaagctcatgctgcaagtggtgaagatcttggtggtcactgtgcagctc
atcctgtttgggctcagcaaccagctggcagtgaccttccgagaggagaacaccatcgcc
ttccggcacctcttcctgctgggctactcggacggggctgatgacaccttcgcagcctac
acacgggagcagctgtaccagtccatcttctatgccgtggaccagtacctgctgctccct
gacatgtcactgggccggtatgcctatgtgcggggcgggggtggcccctgggccaatggc
tcggccctggccctctgccagtgctactaccaccgaggccatgtggacccagccaacgac
acctttgacatcgacccgatggtcgtcactgattgtatccgggtggacccccccgagaga
ccccctgtgccccccagtgatgatcttggcctctcggatggcagcaccagttacaagaac
ctcacgctcaaattccacaagctgatcaacgtcaccatccacttccagctgaagaccatt
aacctccagagcctgatcaacaatgaaatccctgactgctacaccttcagcatcctgatc
acatttgacaataaggcacacagtgggcgtgtccccatcagcctggagacccaggcccac
atccaggagtgtaagcaccccagcgtcttcggccatggagacaacagcttccggctcctg
tttgatgtcgtcgttatcctcacctgctccttctccttcctgctgtgtgcccgctcgctg
ctccgaggcttcctgctgcagaacgagtttgtcaggttcatcaggcggaagcggggtcgg
gtcgtcagcctgtgggagcggctggaatttgtcaacggctggtacatcttgctggtcact
agtgatgtgctcaccatctcaggcaccatcatgaagattggcatcgaagctaagaacctg
gcaagttacgatgtctgcagcatcctcctgggcacctcgacactgctcgtctgggtcggc
gtcatccgctacctgaccttcttccataagtacaatatcctcatcgccacactgcgagtg
gccctgcccagcgtcatgcgcttctgctgctgtgtggctgtcatctacctgggctattgc
ttctgtggctggatcgtgttggggccctaccatgtgaagttccgctcgctgtccatggtg
tccgagtgcctgttttcactcatcaacggggacgacatgttcgtgacatttgcagcgatg
caggcccagcagggtcgcagcagcctggtctggctcttctcccagctctacctgtactcc
ttcatcagcctcttcatctacatggtgcttagcctcttcatcgcgctcatcactggggcc
tacgacaccatcaagcacccgggcggaacaggcgcggaggagagtgaactccaggcctac
attgcacagtgccaggacagccccacctccggcaaattccgtcgcgggagcggctctgcc
tgcagcctcctctgctgctgcggccgagatgcttcggaggagcattcgctgctggtgaat
tga
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