Sus scrofa (pig): 100524746
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Entry
100524746 CDS
T01009
Symbol
DDX19B
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03013
Nucleocytoplasmic transport
ssc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100524746 (DDX19B)
03015 mRNA surveillance pathway
100524746 (DDX19B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100524746 (DDX19B)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100524746 (DDX19B)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100524746 (DDX19B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100524746
NCBI-ProteinID:
XP_003126920
Ensembl:
ENSSSCG00000002722
UniProt:
A0A4X1SR19
F1S432
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All DBs
Position
6:13328241..13358139
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDQQEAAAESLSNLHLKDEKVKPDANGAVVKTNANAEKTDEEEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
ALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcatgggccctagcggtggaccagcaggaagcggcggctgagtcgttg
agcaacttgcatcttaaggacgagaaagtcaaaccagatgccaatggtgctgttgtcaag
accaatgcaaatgcagagaagacagatgaagaagagaaagaggacagagctgcccagtcc
ttactcaacaagctgatcagaagcaaccttgttgataacaccaaccaggtggaagtcctg
cagcgggatcccaactccccgctatactcagtgaagtccttcgaggagcttcgactgaaa
ccacagcttctccagggagtctacgccatgggcttcaaccgtccatccaagatacaagag
aatgcgttgcctttgatgcttgctgagcccccacagaacttaattgcccagtctcagtct
ggtactggtaaaacagctgcctttgtgttggccatgctcagccaagtagaacctgcaaac
agatacccccagtgtctgtgcctttccccaacttatgagcttgcccttcaaacggggaaa
gtgattgagcagatgggcaaattttaccctgaactgaagctagcttatgctgttcgtggc
aataaattggaaagaggtcagaagatcagtgagcacattgtcattggcacccctgggacc
gttctggactggtgctccaagctcaagttcattgaccccaagaagatcaaggtgtttgtt
ctggatgaggcagacgtgatgatagctactcagggccaccaagaccagagcatccgcatc
cagaggatgctgcccaggaactgccagatgctgcttttctctgccaccttcgaagactct
gtctggaagtttgcccagaaagtggtcccagacccaaatatcatcaaactgaagcgtgag
gaggagacattggacaccatcaagcagtattatgtcctgtgcaataacagagacgagaag
ttccaggccttgtgtaacctgtacggagccatcaccattgctcaagccatgatcttctgc
catacccgcaaaacagcgagttggctggcagcagagctctcaaaagaaggccaccaggtg
gctctgctgagtggcgaaatggtggtggaacagagggctgcagtgattgagcgcttccga
gagggcaaagagaaggttctggtcaccaccaacgtgtgtgcccgcggaatcgatgtcgaa
caggtgtccgtcgtcatcaactttgacctgcccgtggacaaggacgggaacccggacaac
gagacctacctgcaccggatcgggcgcaccggccgctttggcaagaggggcctggcagtg
aacatggtggacagcaagcacagcatgaacatcctcaacaggatccaggagcatttcaac
aagaaaatagaaagattggacacggatgatttggacgagattgagaaaatagccaactga
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