KEGG   Sus scrofa (pig): 100524888
Entry
100524888         CDS       T01009                                 
Symbol
SDE2
Name
(RefSeq) LOW QUALITY PROTEIN: protein SDE2 homolog
  KO
K25059  replication stress response regulator SDE2
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssc03041]
    100524888 (SDE2)
   03032 DNA replication proteins [BR:ssc03032]
    100524888 (SDE2)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100524888 (SDE2)
Spliceosome [BR:ssc03041]
 Complex C
  Other components
   Complex C specific factors
    100524888 (SDE2)
DNA replication proteins [BR:ssc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    100524888 (SDE2)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    100524888 (SDE2)
SSDB
Motif
Pfam: Sde2_N_Ubi_vert SDE2 SDE2_2C Exonuc_VII_L
Other DBs
NCBI-GeneID: 100524888
NCBI-ProteinID: XP_003130591
Ensembl: ENSSSCG00000010858
UniProt: A0A8D0THJ2
LinkDB
Position
10:complement(13879482..13897847)
AA seq 455 aa
MAEAAELVWLRGPAFGCKALRVTSTLCSVRDFIHRHCQDQVVPLEYFFVKCNGLLVNASD
TVQHGAVYSLEPRLRGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAE
WVKQQAEREAEKEQKRLERLQRKLAEPRHCFTSPDYQQQCHEMAERLEDSVLKGMQAASS
KVVSAEIGEHRKRPYKSKTDRGASAGKRKCFWLGMDGLETAEGSSSESSDEDSEEAPGSS
GVSFPVPPHGSDGVAMAAKLPSSSQQARVLVSTDPRSSEKLPTPVTDSGRXISEDLCAEL
GEASTEEEHVERKTAAEIENTQEQKETETEEPREKEAAGVGVNKEQETQGMADGEGAAVG
ASGGDGGDVPVARREESQAESTDFGQETIDLLAFNSVADLELLGLEKLKCELMALGLKCG
GTLHERAARLFSVRGLAREQIDPALFAKPSKGKKK
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggcggaagctgcggagctggtgtggcttcgtggccctgccttcgggtgcaaggcgttg
cgcgttacctcgaccctgtgctccgtacgggattttatccaccggcactgccaagatcag
gttgttccattggaatacttctttgtgaaatgcaacggattactcgttaatgccagtgac
acagtgcagcatggagctgtttatagtttggagcccagacttcgtggtggaaaaggaggt
tttggctctatgctccgagcacttggtgctcagattgagaagacaaccaaccgagaagct
tgccgggatctcagtggaaggagactccgagatgtcaatcatgaaaaagcgatggctgaa
tgggtaaaacaacaagctgagcgagaagctgaaaaagagcagaagcgcctggaacggctg
cagcggaagctcgcagagcccaggcactgcttcaccagccccgactaccagcagcagtgc
catgagatggccgagcgcctggaggattctgtcctcaaaggtatgcaggctgcctccagt
aaggtggtatcagcagaaattggtgagcatcggaaacggccttacaaatccaaaacagac
aggggagccagtgcagggaaaaggaaatgcttttggttgggcatggacggactggagact
gcagaggggtcgagctctgagagctccgatgaggacagtgaagaagcacctggttcttca
ggagtgagctttcctgttcccccacatggcagtgatggtgttgcaatggcagccaaactt
cctagtagttctcagcaggccagagtattagtgagtacagaccccaggtcatcagaaaaa
ctgccgacccccgtgactgactccgggaggnggatttcagaagacttgtgtgctgagctg
ggagaggcctccactgaggaggagcacgtggaaaggaagacggctgcagaaatagagaac
acccaggagcaaaaggagacagagactgaagaacccagagaaaaggaagcagctggagtt
ggagtgaataaggagcaagagacacaaggaatggctgatggggaaggagctgctgtggga
gcatctggaggagatgggggagatgtacctgttgccagacgggaggaaagccaggcagaa
agcacagattttggtcaggaaactatagatttgctggcattcaactcagttgcagatttg
gagttgctgggtttggagaagctcaagtgtgaactcatggccttggggctgaagtgtggg
gggacactccacgagcgggcggcaaggctcttctccgtcagaggtctggccagggagcaa
atagacccagctttatttgccaagccttcgaaagggaagaagaagtga

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