Sus scrofa (pig): 100525021
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Entry
100525021 CDS
T01009
Symbol
MEX3C
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100525021 (MEX3C)
04121 Ubiquitin system [BR:
ssc04121
]
100525021 (MEX3C)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100525021 (MEX3C)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100525021 (MEX3C)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100525021 (MEX3C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
Prok-RING_4
zf-C3HC4
RING_XB3-XBAT31
KH_2
KH_DEAH11_2nd
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100525021
NCBI-ProteinID:
XP_020948956
UniProt:
A0A4X1UHC6
A0A286ZNU9
LinkDB
All DBs
Position
1:complement(100678452..100699277)
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AA seq
655 aa
AA seq
DB search
MPSGSSAALALAAAPAPLPQPPPPPPPPPLPPPAAGPELEGDGLLLRERLAALGLDDPSP
AEPGAPALRAAAAQSQARRAAGLSPEERAPPGRPGVSESAELELEEDEEEGEEAELDGEL
LEEEELEEAEEEDRPSLLLLSPPAAAASQTQPIPGGSLGSVLLPAAGFDAREAAAAAAAA
GVLYGGDDAQGMMAAMLSHAYGPGGCGAAAAALNGEQAALLRRKSVNTTECVPVPSSEHV
AEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFVVTGRKEDVAMAKREILSAAEHFSMIR
ASRNKNGPALGGLSCSPNLPGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPS
RDKEPVFEVTGMPENVDRAREEIEMHIAMRTGNYIELNEENDFHYNGTDVSFEGGTLGSA
WLSSNPVPPSRARMISNYRNDSSSSLGSGSTDSYFGSNRLADFSPTSPFSTGNFWFGDTL
PSVGSEDLAVDSPAFDSLPTPTQTIWTPFEPVNPLSGFGSDPPGNMKTQRRGSQPSTPRL
SPTFPESIEHPLARRVRSDPPSTGNHVGLPIYIPAFSNGTNSYSSSNGGSTSSSPPESRR
KHDCVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQIHS
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcggcagctccgcggccctggccctggcggcggccccggcccccctgccgcag
ccgcccccgccgccgccgccgccgccactgccgccgcccgcggctggcccggagctcgag
ggggacgggctcctgctgagggagcgcctggccgcgctaggcctcgacgaccccagccca
gcggagcccggcgccccggctctccgggccgcggcagcgcagagccaggcccggcgggcg
gcggggctgtctccggaggagcgggctccgcccggccggcccggggtttcggagtcggcc
gagctggagctggaggaggacgaggaggagggggaggaagcggagctggacggagagctg
ctggaggaggaagagctggaggaggcagaagaggaggaccggccgtctctgctattgctg
tcgccgcccgcggccgccgcctcccagacccagccgatcccaggcgggtccctggggtcg
gtgctgctgcccgccgccggcttcgatgctcgggaagcggccgcggcggctgcggcggct
ggagtactttacggaggggacgatgcccagggcatgatggcggcgatgctgtcccacgcc
tacggccccggtggctgcggggcggcggcagccgccctgaacggagagcaggcggccctg
ctccggagaaagagcgtcaacaccaccgagtgcgtcccggtgcccagctctgagcatgtc
gccgagattgtcggtcgccagggttgtaaaattaaagcgctgagagccaagacgaacacg
tacatcaagacgcctgttcgtggtgaagagcccatttttgttgtcactgggcggaaagaa
gatgttgccatggccaaaagagaaatcctctcagctgcagagcacttctccatgattcgt
gcatctcgaaacaaaaatggcccggccctgggagggttgtcatgtagtcctaatctgccc
ggtcaaaccaccgttcaagtcagggtcccctatcgtgtggtaggattagtagttggaccc
aaaggagcaactattaaaagaattcagcagcagacccacacctacatagtaacaccgagc
agagataaggaacctgtctttgaagtgacagggatgcccgagaatgttgaccgagcacga
gaagaaatagaaatgcatattgccatgcgtacaggaaactacattgagctcaatgaagag
aatgatttccattataacggtactgatgtaagctttgaaggtggcactcttggctctgca
tggctttcctccaatccagttcctcccagccgcgccagaatgatatccaattatcgaaac
gatagttccagttctctgggaagtggttccacagattcctactttggaagcaataggctg
gctgactttagtccaacaagcccatttagcacaggaaacttttggtttggagatacacta
ccttctgtaggctcagaagatctcgcggttgattctcctgcctttgactctttaccaaca
cccactcaaactatctggactccgtttgaaccagttaatccactctctggctttgggagt
gatcctcctggtaacatgaagactcagcgtagaggaagtcagccatcaactcctcgtctg
tctcctacatttcctgagagcattgaacacccacttgctcggagggttaggagcgaccca
cctagtacaggcaaccatgttggccttccaatatacatccctgctttttctaatggtacc
aatagttactcctcttccaatggtggctccacctctagctcacctccagaatcaagacga
aagcacgactgtgtgatttgctttgagaatgaagttattgctgccctagttccatgtggc
cacaacctcttctgcatggaatgtgccaacaagatctgtgaaaagagaacgccatcatgt
ccagtttgccagacagctgttactcaggcaatccaaattcactcttaa
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