Sus scrofa (pig): 100525295
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Entry
100525295 CDS
T01009
Symbol
BOD1L1
Name
(RefSeq) biorientation of chromosomes in cell division protein 1-like 1 isoform X2
KO
K27262
biorientation of chromosomes in cell division protein 1-like 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100525295 (BOD1L1)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100525295 (BOD1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
100525295
NCBI-ProteinID:
XP_003128904
Ensembl:
ENSSSCG00000008735
LinkDB
All DBs
Position
8:complement(9197064..9254422)
Genome browser
AA seq
2993 aa
AA seq
DB search
MATNPQPQPPPPAPPPPPPQPQPPPPPPGPGTGPGAGGAGGAGAGAGDPQLVAMIVNHLK
SQGLFDQFRRDCLADVDTKPAYQNLRQRVDNFVANHLATHTWSPHLNKNQLRNSIRQQVL
KSGMLESGIDRIISQVVDPKINHTFRPQVEKAVHEFLATLNHKEETGGSTAPDDEKPDSS
VITQGVPAPGPSANVASDAMSILETITSLNQEASAARASTETSNAKACERTSKKLPSQPS
TDTGAEKERTSEDATEKEKPTPDSAGEGQETALKSEELNDLPGPVEESKNHTKESNSSVL
LNKDVQQESSDPKNKSTDKGEKKADSSEKGERKKEKKEKTEKKLDHSKRSEDVQKVKDER
QTKDKDAECSKLPSEKNNSKAKTGEGTREDFSLIDSDVDGLTDITVSSVHTSDLSSFEED
TEEEVVVSDSMEEGEITSDDEEKNKQNKTKTQTGDPSEGRAKSVRHAYVHKPYLYSKYYS
DSDDELTVEQRRQCIAKEKEERLLRRQINREKLEEKRKQKEKTKSSKAKSQGKGSMDLEE
SSTKSLEPKVPRIKEVLKERKVLEKKVALSKKRKKDSRNIDENSKKKQQSEDDSKETLKT
SEHCEKEKTSSSKDLKHIHAKSESSKPARRLSESLHSTDDNKSESKTEREHKRRTSTPVV
VEGAQEETDTRDGKRPVERSETGTEEPQKQKSILKNEKHLKKEDFETPHLKSLPKKEAKS
TKDKPEKEKTLSEDKPSIKHKYKGDSAHKAGDEAELHSSEKGLTVDESTQKSSQPAKLSS
DDKAERKSRHRNERKLSILGKDGKPVSEYIIKTDENVRKENNKKERHMSADKTKGEHKSR
RSSDSKIQKDSLSSKQHGITLQRRSESYSEDKGDTDSTNTDSNPKPDEVVHKEKRRTKSL
LEEKLVLKSKSKGQGKQSKALETELQENVTKQAPTPKADKEKNTEESDPDRPRKSKIEDR
SPEESGVEPASESAAPSAHGAQKESSHRARLLPAKEKYKGEKDASSARLERKLSEGHRSR
GLKHSGKDVRKREENKSEDKDGKEADGSNEKARGNSSVVEKKLSRRLCENRRGSLSQEMT
KGEEKPAASPSGPPSSSSLQRPRKSNDPTSGPEEEPMEIDPEPAVENAPEVSKTQDGSSS
SSQQDLDSDCLLKQKTTTAVLKEELRTCIEDSKKAAPACRSGRGTGAVGGTSEKHADHKS
TLPKKVHLQSAVSKPSPGEREPTQPGTHSMNVDSDPGHRLLPRVASESDRAQKNLRNTSR
PSEEDVAPGDAALEHSTDVDPSPSLSSGTVVPQKQSHDSGVVPVVDKRTVSEGGPASTSF
VDHSETPNQSLTVAESEVPRISDSKEGAMLSTVDTPAMASVSSRGHIPEGYQATVLHTKQ
GNVNVPLSSELMGTTVENEPVNKESGLVDMAGRERDLKSSQTVRASVENGRKDGMAVGPA
VGMCLENDAETAGLKPPRGLCEVENVSADANRRNENSEVDTSAGITAVSSVEQQRHGKAE
TVPTGFGRAEKTSVATSTEGKDRGVPSNPVKAGDATTTCSETGEGEVAVPCTSIEADEGF
IAGMHPSSHPLHAGAEAHEGTVFAAAEEGGDVVTEGFAESETFLTSTKEGDSGECAVAEP
EERAADPVMAHSGTAEGEVNSVATEEKDDAVTSAGSEGKCDGSSSRDAELAEATVAFISE
VESDGAVTSAGTEIRAGSLSREETDGFQRNVTRMGPKKEIEGTVTCTGAEQRSDSFVMCL
VTGAGPQEERRVMGAPGAPVDNDAPGGASATQEAGGSASDSPEGESAVTSTGITEEDGEG
PASCTGSEESGEGFALISESEENGESAMDSTVAKDIANAPSVAAGPCDDEGIVTSTGAKE
EDDEGEGVVTSTGRGNEVGHASTCTGPEEESEGLSICESAEEADGQVGTVARHVEAEVPS
AHESSVDSMSGAEKDVKDTEICSSAKGVVESSVTSAAEGKGEAAPVPEGGEAPMTSAASD
QSDGGLTQEETVDETAISAGLVGGSHEALVSGVVPGCGACPPSPSEKEDEGIITSVENED
CEGPVAAPARDKVTTQACSAGGKGQGKGLMISTSTTDGFTTQLSATVDVEEGGSSALRTE
GSVEGTQVNVEEFEAPMPSAASGDESQLVAAGNEEKDECAMISTSLGEEFEVPVSSATTI
QRAESQQAVAAVDAKRLMSVSTEDFEGPTPSAPAGVKSPRASTSKEEKDECALISTSIAE
ECEASVCGVAAERERERSVLIMEEKDGNAIISTSSVEDCEGPVSSAVPREEVRPSARPAE
ETGDTAMISTSTSEGREAVMAGAVPQDEDRPALAGAEDFGDTAVISTSTAECVLTASGLD
RHEDNQLTAGNTGGKGDPSAAKASKPELPVPGVRAGSNRQCPGPCAGGRSGPMVALGSGE
GQDRVAVSMLPPGAVCAPEEGRPGKDCLGSAQRADKSPEAATSRDSAPASCSATRSSEMT
SDSPVNPRKPEQTAQDSSGSLCCLTAVNTGAKKTDALSSLPPEGNLQTTPAECINGQESE
IAPSHTAVLPTTCSGAFSAHKGEQDLTVKSDHSGRRTVAVSTEKAEDGDIVIKSSQEERG
LEVIVSSEKYLHDSGSEESASNDLGGLRPKANLKTEVFVPSEEEKNHEIVAPPESPSGRK
LSGRAELHGEPLLVTESLNVENSGSKANEIHSRSHNKDGTANGGKDNAVKGHGVEASPTE
VEEEERHMPKRKRKKQYLSSEDELDDNPDVPDSKIETAQRQCSETEAEPQDTKEENPGDL
EELSKTSSETDNTASRAMEEKDEYSSSEAAGDKTEQNDDDNIRSQEEDQPIIIKRKRGRP
RKYPVETALKTKDDCRTDAGIITVEQSPPGSKLKVMQSDESSREPPSLHERTGSNDDGEE
KSIASVRRRGRKPKRSLTLSEDAESSEPERKRQKSVSEATEDKRDQESDEEEDEEEEDEP
SGATTRSSTRSEAQRSKAQLSPSAKRKREVSPPGARTRGQQRVEEAPAKKAKR
NT seq
8982 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaatccgcagccgcagccgccgcctcccgcgccgccacctcccccgccgcag
ccgcagccgccgccgccgccgcccggccccgggaccggcccgggcgcgggtggggcgggc
ggcgcgggagccggcgccggggacccgcagctcgtggccatgatcgtgaatcacctcaag
agccaggggcttttcgaccagttccgcagagactgcttagccgacgtggacaccaagcct
gcctatcagaacctgagacagcgtgttgacaactttgttgcaaaccacttagcaactcat
acctggagtccccacctcaataaaaatcagctaagaaacagtattcgacagcaagtgctc
aaatcaggaatgttggagtctggtattgaccgaattatttctcaggttgtggatccaaag
atcaaccacaccttcagacctcaggtggagaaagcagtgcatgagtttctggccacgcta
aatcacaaagaggaaacaggtggcagcacagcacctgatgatgagaaaccagactcttcc
gtcattacacaaggtgtccctgcccctgggcccagtgcaaacgtggccagtgacgccatg
tcaatcttggagaccatcacctctcttaaccaagaagctagcgctgccagggcttcaaca
gaaacgtcaaatgccaaggcctgtgagagaacatccaaaaaactcccatctcagccaagc
actgacactggtgccgagaaggagagaacttcagaggatgcgactgaaaaagaaaaacct
acacctgactctgcaggggaaggacaggagacagccctgaagtcagaagaacttaatgat
ctcccaggtccagttgaagaaagtaaaaatcacactaaagagagcaatagttcagttctg
ctaaataaagatgttcagcaagaaagcagtgacccaaaaaataaatcaacagacaaaggt
gaaaagaaagcagacagcagtgaaaagggagaaagaaagaaagaaaagaaggagaagact
gagaagaaattggatcactcaaaaaggagtgaagatgtacaaaaagtgaaagatgaaaga
caaacaaaagataaagatgcagaatgttcaaaacttccttcagaaaaaaacaatagtaaa
gctaaaactggtgaagggacaagagaagatttctctttgatagattctgatgtggatgga
ctcacagacatcacagttagctctgtccacaccagtgacctttcatcttttgaagaagac
accgaggaggaagttgtagtgtctgacagcatggaggaaggagagatcacatcagacgat
gaagaaaagaacaagcagaacaaaaccaaaactcaaaccggtgaccccagtgaagggaga
gcaaaaagtgtacggcatgcttatgttcacaaaccgtatctttactcaaagtattacagt
gattctgatgacgaacttaccgtagaacagcgccgacagtgtatcgctaaagaaaaagaa
gagagacttttaagaaggcaaattaatagagagaaacttgaagaaaaacgaaaacagaaa
gaaaagacaaagtcttcgaaagctaagagtcaaggcaaaggtagtatggacttagaagaa
tcatccacaaagagtttggaacccaaagtcccccggattaaagaagtacttaaagaacgg
aaagttttagagaaaaaggtagccttaagcaaaaaaagaaaaaaggattccaggaacatt
gatgagaattctaaaaagaaacaacaatctgaagacgattccaaagaaaccctcaaaaca
agtgagcattgtgaaaaggaaaaaacgtcttcttcaaaggatttgaaacacattcacgca
aagagtgaatcaagtaaacctgctcggagactttcggagtctttgcattcaactgatgac
aacaaaagcgaatccaaaacagaaagggaacataagaggcggacatcgacccctgttgtg
gtggaaggggcgcaggaagagaccgacacgagagatggaaaaaggccagtggaacgctca
gaaactggcacagaagagccccagaaacagaaaagcatacttaaaaatgagaagcatcta
aagaaagaggattttgaaacaccacatttgaaaagcctacctaagaaagaggcaaaatcc
accaaggacaagcctgaaaaagagaaaactctgtcagaagacaaaccgtccataaaacac
aagtataagggtgacagtgcccataaagcaggtgacgaggctgagcttcactcttccgag
aaaggcttgaccgttgatgaaagtactcagaagtcaagtcagccagcaaagctttcctcg
gatgataaagctgaacgaaaaagtagacataggaatgaaaggaaattatcgattttgggc
aaagatggtaaaccggtttctgaatatatcataaaaactgatgagaatgttcgtaaggaa
aacaacaaaaaagagaggcacatgtcagctgacaaaactaagggagagcacaaatcaaga
agatcaagtgattctaaaattcagaaagattctttgagttccaagcaacatggaatcact
ttacagagaagaagcgaaagttactcagaggataagggtgatacagactcaactaataca
gatagtaaccccaaacccgatgaggttgttcacaaggagaagcgaagaaccaagagcttg
ttagaagagaaacttgtgttaaaatctaaatccaaaggccaaggcaagcagtcaaaagca
ctggaaacagaattacaagaaaatgtcacaaaacaggcgcccactccaaaagcagataag
gaaaagaacacagaagaaagtgacccagacagaccgcggaagtctaaaattgaagaccga
tctcccgaggaaagtggggtggagcctgcatcagagagtgcagccccttcggcacacggt
gcacagaaagagtctagtcacagagcgaggctactgccagccaaggagaagtacaagggt
gagaaagatgcgagctctgccagacttgagagaaagttatccgaggggcacaggagcaga
ggcctaaagcacagtggtaaggatgtgagaaagagggaagaaaataagtcggaggacaag
gatggtaaggaagccgatggtagtaacgaaaaggccagaggaaatagttccgtcgtggaa
aagaaattaagcagaaggttgtgtgaaaatcgaagaggaagcttatcccaagaaatgacc
aaaggggaagaaaaaccagcagcgagcccttcaggccctcccagtagttcctcccttcag
agacccaggaaaagcaatgatcccacctcgggacccgaagaggagccgatggaaattgat
cccgagccagccgtggaaaacgcaccagaagtgtctaaaacacaagatggcagcagcagt
agttctcagcaagaccttgactcagactgtcttttgaaacaaaaaaccactactgcagtt
ctaaaggaagagttaagaacttgcatagaagactcaaaaaaagcagccccagcctgcaga
tccggacgtggaaccggagctgttggtggtacatctgagaagcacgctgaccataaaagc
accctgcccaagaaggtgcatctccaaagtgctgtgtccaaaccgagccctggggagagg
gagcccactcaaccagggactcacagcatgaatgtagactctgaccctggtcatcgattg
ttacctcgtgtcgcatcagaaagtgacagggcacagaagaatttgagaaataccagcaga
ccctctgaagaagatgttgctccaggagatgctgctctcgaacattccacagatgtggac
ccctccccgtccttaagttccgggaccgttgttcctcagaaacagtctcacgattccggc
gtagttcctgtagttgacaaaaggactgtttcagaaggtggcccagccagcacctcattt
gtggaccactctgagacccctaaccaaagtttgaccgttgcagaatcagaggtccctagg
ataagtgacagcaaagaaggtgccatgctttccacggtagacacaccagcaatggcaagc
gtgagtagcagaggacacattccagaaggttaccaggccactgtcctgcacactaaacaa
ggaaatgtaaacgtgcctctcagtagtgagttgatgggcacgactgtggaaaatgagcct
gttaataaagagagcggcttggtggacatggccgggagagaacgtgacttgaaatcaagc
cagacagttagagcttctgtagaaaatggcagaaaggatggcatggctgtcggtcctgcg
gtaggcatgtgtttagaaaacgatgctgaaactgctggacttaagcctcctagaggcctg
tgtgaagtagaaaacgtgtcagctgatgccaacagaaggaatgaaaacagtgaggtggac
accagtgctggaattaccgctgtgtcctctgtggaacagcaaaggcatgggaaagctgag
accgtgcccactgggtttggtcgagctgaaaagacttctgtggccaccagcactgaaggg
aaggacagaggtgttccctcaaacccggtgaaggcaggggatgccaccaccacttgttca
gagacaggagagggtgaagtggccgtgccctgcacgagcatcgaggcggatgaaggcttc
atcgcggggatgcaccccagcagccacccgcttcatgccggggccgaagcccacgaaggc
accgtctttgccgcagccgaggaagggggggacgttgtcaccgaaggatttgctgaaagt
gagactttccttacaagcaccaaggaaggagacagtggagagtgcgcagtggccgagcct
gaagaaagggcagcagacccggtgatggctcactcggggacagccgaaggcgaggtcaac
agtgtggccaccgaagagaaggacgatgctgtaaccagcgcgggttccgaagggaaatgt
gacggttcttcaagcagagacgcagaactcgcggaagcaacggttgcctttattagtgag
gtggaaagcgatggggccgtcacaagtgctgggaccgaaatcagagcggggtccctcagc
agggaggagacagatggattccagagaaatgtgacaaggatgggccccaagaaagaaatc
gaggggactgtgacatgtacaggagcagagcagagaagtgacagcttcgtcatgtgctta
gtgacaggtgcagggccacaggaagagcgcagagtcatgggtgctccgggggccccagtt
gataatgacgcgccaggaggagccagcgccacccaggaggcgggaggttctgcaagcgac
agcccggaaggggagagcgccgtcaccagcacagggataacggaggaagacggggagggc
ccagcgagctgcacgggttcggaagagagcggtgaaggctttgctctgatttccgagtcc
gaggaaaacggagagagtgcgatggacagcacggtagccaaggacattgccaacgcgcca
tctgttgctgctggcccatgtgatgacgaaggcatcgtgaccagcacaggcgccaaggag
gaggatgacgaaggggagggggtggtgaccagcactggcagaggcaacgaggtcggacac
gcgtccacgtgcacggggccggaagaagagagtgaggggctgtcgatttgtgaaagtgcg
gaggaagcggacggtcaggttgggacggtggccaggcacgtggaagctgaggtccccagc
gcacacgagagtagcgtggacagcatgagcggtgccgagaaggacgttaaagacacagag
atctgctccagcgccaaaggcgttgtggaaagcagcgtgaccagcgccgctgagggaaag
ggcgaggcggctccagtgcctgaaggtggagaggcccccatgaccagtgcagcatcagat
caaagtgacggtggcctcacccaagaggaaactgtggacgagaccgctatttccgccggc
ctggtggggggcagtcacgaggcactggtgtctggcgtggtcccagggtgcggggcttgc
cccccatcaccgagcgagaaggaggacgaaggcatcatcacctccgtggaaaatgaagac
tgtgagggccccgtggccgctccggccagggacaaggtcaccacccaggcgtgttcggcg
gggggtaaaggtcaaggcaaaggcttgatgatttccaccagtacaacagatggcttcacc
acacagttaagcgcgactgtggacgtggaagaaggtgggtccagtgccctgaggacggaa
ggaagcgtggaaggcacccaagtgaacgtggaagagttcgaggcccccatgcccagcgca
gcgtcaggggacgagagccagctcgtcgctgctggaaacgaggagaaagatgagtgcgcc
atgatttcgacaagcctcggggaggagttcgaggtccccgtttccagtgccaccaccatc
cagcgcgccgagagccagcaggcggtcgcagcagtcgacgctaaaagactgatgtccgtc
agcaccgaggacttcgagggccccacgcccagcgcgcccgcgggagtcaagagcccccgg
gcttcgaccagcaaggaggagaaagacgagtgcgccctcatttccaccagcatcgcggag
gaatgcgaggcctccgtgtgtggtgtggctgcggagagggagcgtgagcggtccgtcctc
atcatggaggagaaggatgggaacgccatcatctcgacgagctccgtagaagattgcgag
ggcccagtgtccagcgccgtccctcgagaggaagtccggccctcggccaggccagcagaa
gagacgggcgacaccgccatgatttccaccagcacctcggaagggcgtgaagcggtcatg
gcgggtgctgtcccacaggatgaagatcggcctgcccttgcgggagcagaggacttcggt
gacactgccgtcatctccaccagcacggccgagtgtgtgctgaccgccagtggcctcgac
aggcacgaggacaatcagctgactgcaggcaacacaggaggaaaaggtgacccctcagct
gcaaaggcgagcaagcctgagctccctgtgcccggcgtgagggctggaagcaaccgtcag
tgtcctgggccctgcgcaggaggaaggtcgggccccatggtggcactgggaagcggggaa
gggcaggacagggtggcagtcagcatgctccctccaggtgccgtgtgtgcaccagaggaa
gggaggcctggcaaggactgtctgggcagtgctcagagagcagacaaaagccctgaggcc
gcgacatccagggacagtgctccagcaagttgttcagcaacgaggagctcagagatgacc
tcggactcccccgtgaaccctagaaaaccagagcagacagcccaggactcctctggcagc
ctgtgctgtttgacagcagtaaatactggtgctaaaaaaactgatgccttgtcctctctt
cctcctgagggcaacttgcaaaccacccctgctgaatgtattaatggccaagaatccgaa
atcgctccttctcacacggcagtccttcccactacctgcagtggagcgttctcggctcat
aaaggtgagcaggacctgactgttaagagtgaccacagtggcaggaggactgttgcggtg
tccactgagaaagcagaagatggtgacatcgtgataaagtcttcccaggaagaaagaggc
ctcgaagtcattgtttcttctgaaaaatatttgcatgactcaggcagtgaagagtctgcg
tcgaacgatttgggaggattgagaccgaaagccaacttgaaaactgaggtgtttgtgcca
tcagaggaagagaaaaatcatgaaattgtagcaccaccagaaagtccgagtgggagaaag
ctgagtggaagagctgaactccatggggagcctttgttggtgacagaatcactgaacgtc
gaaaattcaggctcgaaagcaaatgaaattcatagcagatctcataacaaagacgggaca
gccaatggtgggaaagacaacgcagtaaaaggtcacggtgttgaagcaagtcctacagag
gttgaagaggaagaaaggcatatgcctaaaagaaaaagaaagaagcagtacctctcttca
gaagatgaactagatgataatcctgatgtcccggattccaaaatagaaacagcacagagg
cagtgttctgaaacagaagccgagccacaagatacaaaggaagagaaccctggagattta
gaagaattatctaaaacaagttctgagacagacaacactgcttcaagggccatggaagaa
aaagatgagtacagcagcagtgaagctgccggtgacaagacagagcagaacgacgacgac
aacataagatctcaagaggaagatcagccaataattattaaaagaaaaagaggaaggcct
cgtaaatacccggtagaaacagcattaaaaacaaaagatgactgcagaacagatgctggc
attatcacagtagaacagtctccacctggcagcaaactgaaagtgatgcaatcagatgag
tccagtagagaaccacccagcctacacgagcgaactggaagcaatgacgacggtgaagaa
aaatctatagcaagtgtgcgtcggagaggaagaaagccaaagcggtcgctcactctgtct
gaggacgccgaatcctcagagccagagagaaaacgccagaaatcggtttctgaagcaact
gaggacaagagagaccaggagtcagatgaggaagaggatgaagaggaagaggatgagccc
tccggagccaccacgaggtccagcaccagatcagaggctcagagatcaaaggcacagctc
tccccttctgccaagcgcaagagagaagtcagccctcctggagcacgcaccagaggccag
cagagggtggaggaggctccggcgaagaaggccaagcggtaa
DBGET
integrated database retrieval system
