Sus scrofa (pig): 100525414 Help Entry 100525414         CDS       T01009                                  Symbol SYNPO2 Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism ssc  Sus scrofa (pig) Pathway ssc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ssc00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     100525414 (SYNPO2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:ssc04990]     100525414 (SYNPO2) Domain-containing proteins not elsewhere classified [BR:ssc04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    100525414 (SYNPO2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ Calsarcin PDZ_6 PDZ_2 Motif Other DBs NCBI-GeneID:  100525414 NCBI-ProteinID:  XP_020956357 Ensembl:  ENSSSCG00000009111 LinkDB All DBs Position 8:complement(104677580..104844169) Genome browser AA seq 1261 aa AA seqDB search MGTGDFICISMTGGAPWGFRLQGGKEQQQPLQVAKIRSQSKASGSGLCEGDEVVSINGNP CANLTYPEVIKLMESITDSLQMLIKRPSSGISETLITETENKNHEHLTHEGYVESTTLQI RPATKSQCREYYIAPVKSGAPLAEDQARGTGVSGSIKEEASLAPHTSDLESEHLPEEGIL RDNAEVGRAGTVVELQLSLSQERHKGASAPVVALLGAEKSKSPDPDLNLQHDGTVRINSV PTSEKGDSALRSSKIIQISSGQELRVIQGSEAGDSELPRVEVIFNCSDRQKTEGCRLQAG KGCVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPRSERDHSRPHKHRARHARLRRSESL SEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELEREADEE EEEGDKEDTCEVAFLGASESEVDEELLSDIDDNTQVVNFDWDSGLVEIEKKLNRGDKMEM LPDTTGKGALMFAKRRERMDQITAQKEEERVGGVPSREPNAAQMDGLRTMTSYQRKEEES VRVQSSVSKSYIEVSPGLGHMTQQNGFTGMSETADAQRMTPMNRTAKPFPGSVNQPATPF SPTRNMTSPIADFPAPPPYSAVTPPPEPFSRAVSSPVAGPAQPPPWPQPVPWSQPAFYDS SERIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGKKGT GAGGDSGPEEDYLSLGAEACNFMQGSSTKQKTPPPVAPKPAVKSSSSQPVTPVSPVWSPG VAPTQPPAFPTSSPSQGTVVSSIKIAQPSYPPARPASALNLAGPFKGPQASVATLNYTPK PAAPTPTVNAAHAGAVGPSNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHAARAQSP TPSLPAGWKYSSNVRAPPPVAYNPIHSPSYPLAAVKSQPSAPQASKTSKKKGKKPLNALD VMKHQPYQLNASLFTFQPPDSKDGLPPKASVKVSSAPGMKQALPPRPVNAGSPTNVQASS VYSVPAYTSPPSFFAEATSPVSASPVPVAIPTSPKQESASPSYLVAPRPKFSAKKSGVTV QESGRSLSLPGRPVPPAISTTSPWGYQPAYSYSSKPTDELEKANKRLTPWEAAAKSPLGL VDDAFRPRNIQESIVANVVSAARRKVLPGPSENWNERLSYVPQTQKASMGSSGRQEYNVA SLPINSMPTSSQYGSQVPYAYYRQPSRHDSEIMSMETRSDYCLSVAGCNYNPYPRGWRRQ T NT seq 3786 nt NT seq  +upstreamnt  +downstreamnt atgggcacgggggattttatctgcatttccatgaccggcggggcgccctgggggttcaga ttgcaaggtggcaaagagcagcagcagcccttacaagttgctaagatccgaagccagagc aaagcctctggatctgggctctgtgagggggatgaagtggtttctatcaatggcaaccct tgtgcaaacctcacctacccagaagtcatcaagctcatggagagcataacagactctctc caaatgctcatcaaaagaccatccagtggaataagtgagactttgattactgaaactgaa aacaaaaaccatgaacatctcacccatgaggggtatgtggaaagtaccaccctacagatt cgaccagccacaaagagccagtgcagagagtactacatcgccccagtcaagagtggagct cccctagctgaggaccaagcacgtggtactggagtttctgggagcataaaagaagaagca agcctggctcctcacacatctgacttggaaagtgaacacttaccagaggagggtatctta agggacaatgcagaagtggggcgagcaggcactgtggttgagctacaactatccctttca caagagagacacaagggcgctagtgcccctgtagtggctctcctgggagctgaaaaatct aagtctcctgacccagatctaaatttacaacatgatgggactgtccgcataaattcagtc cccactagtgagaaaggggactctgctctgaggtccagcaagataattcagatctccagt ggccaagagttgagagtgatccaaggtagtgaagcaggagattcggaactgccccgagtg gaagtgatcttcaactgctctgacaggcagaagacggaagggtgcaggcttcaggcagga aaggggtgtgtggattctccagtggaaggagggcagtcagaagcacctccttctctggta tcctttgcagtctcatcagaaggcacagagcagggagaagatccacgctctgaaagggat cacagcagacctcacaagcacagagcacgccacgcacggctcagaaggagtgaaagccta tcagaaaagcaggtgaaagaagcaaagtctaaatgcaaaagcattgccctccttctaaca gatgcccccaaccccaactccaagggggtgttgatgtttaagaagcgtcgtcggagggcc aggaaatacaccctagtcagctacgggaccggtgaacttgagcgagaggccgacgaggag gaggaagaaggggacaaagaagatacatgtgaagtagcatttctgggtgcaagcgaatca gaggtagatgaagagttattgtctgatattgacgacaacacacaagttgtgaactttgat tgggattctggactagtggaaattgaaaagaaactgaacagaggggataagatggagatg ttgccagacaccacaggcaagggagccctcatgtttgccaagaggagggagagaatggat cagattacagcccaaaaagaggaggaaagggtgggtggagtgccaagcagagaaccaaat gctgcccagatggatggcttgagaaccatgacatcctaccaaaggaaggaagaagaatca gtgagagtgcagagctctgtgagcaaaagctacattgaggtgagcccaggtcttggccat atgactcaacagaatggcttcaccgggatgtctgagacggcagatgctcagagaatgacc cctatgaatagaacggccaaacccttcccagggtctgtgaaccagccagcaacgcccttc tctccaacccgaaacatgacaagtcccatcgctgactttcctgcacctccaccttattct gcagtcacacccccaccagaacccttctctagggcagtgtcaagtccagtagctggccca gcacagccccctccatggccccagcctgtcccatggtcccaaccagccttttatgattca tctgaaagaatagcttctcgggatgaaaggatcgcagtaccagcaaaaagaacaggaata ttgcaggaggctaaaaggagaagcacaacaaaacccatgttcacttttaaagagcccaaa gtaagcccaaatcctgaactcttgtcacttcttcaaaattcagaaggaaaaaaaggcact ggagctggaggtgattctggaccggaagaagactacctcagtttaggagcagaggcttgt aatttcatgcaaggctcctctacaaaacaaaagaccccacctcctgttgctccgaagcct gctgtcaagtcctcatcctcccaaccagtaactccagtttctccagtctggtcgccagga gtggctccaacccaacctcctgcctttcccacatccagtccatcacagggcaccgttgtc tcctccatcaaaatagcccagccttcttatcctcctgcccggcctgcaagtgctttgaac ctggctggtcccttcaaaggaccacaagcatcagtagccactctgaactacactcccaag ccagcagctcccacaccaacagtaaatgctgctcatgctggtgcagtgggaccatccaat gagcttcccggaatgagcgggaaaggagcccagctctttgctaaaaggcagtctaggatg gagaagtatgtggtggattcagacacggtgcaagctcacgctgctcgtgcacagtctccc actccatctctaccagctggctggaagtactcctccaacgttcgagcacctcctcctgtg gcctacaatcctatccattccccttcctacccactggctgctgtcaagtctcagccatca gccccgcaggcctctaaaacaagcaagaaaaagggcaagaaacccctcaatgctttggat gtaatgaagcaccaaccgtatcagctaaatgcgtccttgtttactttccaacctccagat tcaaaggatggcctccccccaaaggcatcagtcaaggtcagttcagcgccaggcatgaag caagctcttcctcctcggccagtgaatgctggctcgcccactaatgtgcaagcctcgtcc gtgtactcagtaccagcctatacctctccgccttccttctttgctgaggccacctcacca gtcagtgcctccccagtgcctgtggccattcccacctcgccaaagcaagaatcagcctca ccatcttaccttgtagcaccaaggccaaagttctcagccaagaaaagtggtgtcacagtt caggagagtggacgctcgctttctcttcctggaagacctgtcccacctgccatatctaca acatctccttggggataccagcctgcttatagctactctagcaaaccaactgatgagcta gagaaagcaaacaaaaggctaactccttgggaagcagcagccaagtctcctcttggttta gtggatgatgcctttagacccagaaatatccaggaatccattgtggcaaatgtggtctca gcagctcggaggaaggtgcttccagggccgtccgagaattggaatgaaagactctcctat gtccctcaaacccagaaggccagtatgggctcatctggaaggcaagagtataatgttgcc tccctacccattaacagtatgcccaccagctctcagtatggttcacaggtgccatatgca tactacaggcagccttccagacatgattctgaaataatgtccatggagaccaggtctgat tattgtctttcagtagccggttgcaactataacccatacccaagggggtggagacgccaa acatga

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