Sus scrofa (pig): 100525579
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Entry
100525579 CDS
T01009
Symbol
CDH11
Name
(RefSeq) cadherin-11 preproprotein
KO
K06803
cadherin 11, type 2, OB-cadherin
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100525579 (CDH11)
Cell adhesion molecules [BR:
ssc04515
]
Cadherins
Major cadherins
100525579 (CDH11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
ASFV_J13L
DUF443
RIFIN
Motif
Other DBs
NCBI-GeneID:
100525579
NCBI-ProteinID:
NP_001231411
Ensembl:
ENSSSCG00000002795
Vega:
OTTSUSG00000001484
UniProt:
F1RFU7
A0A8D1BCQ2
LinkDB
All DBs
Position
6:complement(25782746..25933753)
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AA seq
796 aa
AA seq
DB search
MKENYCLQAALVCLGMLCHSQAFATERRSHLRPSFHGHHEKGKEGQVLQRSKRGWVWNQF
FVIEEYTGPDPVLVGRLHSDIDSGDGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREE
RAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLQETYHANVPERSNVGTSVIQ
VTASDADDPTYGNSAKLVYSILEGQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKD
MGGHMGGLSGTTKVTITLTDVNDNPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGEN
GLVTYNIVDGDGMELFEITTDYETQEGVVKLKKPVDFETKRAYSLKVEAANVHIDPKFIS
NGPFKDTVTVKIAVEDADEPPMFLAPSYIHEVQENAAAGTVVGRVHAKDPDAANSPIRYS
IDRHTDLDRFFTINPEDGFIKTTKPLDREETAWLNITVFAAEIHNRHQEAKVPVAIRVLD
VNDNAPKFAAPYEGFICESDQTKPLSNQPIVTISADDKDDTANGPRFIFSLPPEIIHNPN
FTVRDNRDNTAGVYARRGGFSRQKQDLYLLPIVISDSGIPPMSSTNTLTIKVCGCDVNGA
LLSCNAEAYILNAGLSTGALIAILACIVILLVIVVLFVTLRRQKKEPLIVFEEEDVRENI
ITYDDEGGGEEDTEAFDIATLQNPDGINGFIPRKDIKPEYQYMPRPGLRPAPNSVDVDDF
INTRIQEADNDPTAPPYDSIQIYGYEGRGSVAGSLSSLESATTDSDLDYDYLQNWGPRFK
KLADLYGSKDTFDDDS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaactactgtttacaagccgctctggtgtgcctgggcatgctgtgccacagc
caggccttcgccaccgagcgcaggagccacctgagaccctcgttccacgggcaccacgag
aagggcaaggagggccaggtgctgcagcgctccaagagaggctgggtctggaaccagttc
ttcgtgatagaggagtacaccgggcctgaccccgtactcgtgggcaggcttcattccgat
attgactctggtgatgggaacattaaatacattctctcaggtgaaggagctggaaccatt
tttgtgattgatgacaaatcagggaacattcacgccaccaagacactggaccgagaggag
agagcccagtacacactgatggctcaggcggtggacagggacaccaaccggcccctggaa
ccaccatcagaattcattgtcaaggtccaggacattaatgacaaccctcccgagttctta
caggagacctatcatgccaacgtgcctgagaggtccaacgtgggaacatcagtaatccag
gtgacagcttcagacgcagatgaccccacctatggaaacagtgccaagttagtgtacagt
atcctggaaggacaaccctacttttcagtagaagcacagacaggtatcatcagaacagcc
cttcccaatatggacagggaagccaaggaggagtaccacgtggtgatccaggccaaggac
atgggtggacacatgggtggactctcagggacaaccaaagtgacgatcacactgactgat
gtcaatgacaacccaccaaagtttccgcagagcgtataccagatgtctgtgtcagaagca
gctgtccccggagaggaagtaggaagagtgaaggctaaagacccagacattggagaaaat
ggcttagtcacgtacaatatcgttgatggagatgggatggaattgtttgaaatcacaacg
gattatgaaacacaagagggcgtggtgaaactgaaaaagcctgtagattttgaaaccaaa
agagcatacagcttgaaagtagaggcagccaacgtgcacatcgacccgaagttcatcagc
aatgggcctttcaaggacactgtgacggtcaagatcgcagtagaagatgctgatgagccc
cccatgttcttggccccaagctatatccatgaagtccaagaaaatgcagccgctggcact
gtggtggggagagtgcatgccaaagaccctgatgctgccaacagcccaataaggtattca
atcgatcgtcacactgacctggacaggtttttcactattaatccagaggatggttttatt
aaaacaacaaaacctttggatagagaagaaactgcctggctcaacataacagtttttgca
gcagaaatccacaaccggcatcaggaagccaaagttcccgtggccattagggtccttgat
gttaacgacaatgctcccaagtttgctgccccttatgaaggcttcatctgtgagagtgat
cagaccaagcctctttctaaccagccaattgttacaattagtgcagatgacaaggatgac
acagccaatggaccaagatttatcttcagtctaccccctgaaatcattcacaatccaaat
ttcacagtcagagacaacagagataacaccgcaggggtgtatgcccggcgcggagggttc
agtcggcagaagcaggatttgtacctcctgcccattgtgatcagcgatagtggaatcccg
cccatgagtagcaccaacaccctcaccatcaaggtctgtgggtgtgatgtgaatggggcg
ctgctgtcctgcaatgctgaggcctacatcctgaacgctggcctgagcacaggggctctg
atcgccatcctcgcctgcatcgtcattctcctggtcatcgtagtgttgtttgtgactttg
agaaggcaaaagaaagaaccactcattgtcttcgaggaagaagatgtccgtgagaacatc
attacctatgatgatgaggggggtggggaagaagacacagaagcctttgatattgccacc
ctccagaatccggatggtatcaatggatttatccctcgcaaagacataaaacccgagtat
cagtacatgcctagacccgggctccgaccagcacccaacagtgtggatgtggatgatttc
atcaacacgagaatacaggaggcagataatgacccgactgcccctccttatgactccatc
caaatctatggttacgaaggcaggggctcagtggctgggtccctgagctccttagagtcg
gccaccacagattcagacttggactatgactacctacagaactggggacctcggtttaag
aaactagcagacttgtacggttccaaagacacttttgatgacgactcttaa
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