Sus scrofa (pig): 100525585
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Entry
100525585 CDS
T01009
Symbol
COL8A2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100525585 (COL8A2)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
100525585
NCBI-ProteinID:
XP_020951584
UniProt:
A0A8D1U8W0
A0A287AHD4
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Position
6:complement(92246047..92272046)
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AA seq
707 aa
AA seq
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MRGALTPLPSLSLPLLLLLLLLLLGCWPRAAAGGGAAGAAGYAPVQYVQPMHKGPVGPPF
REGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGTGKPGLHGQPGPAGP
PGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGIAVPGKPG
PQGVPGPPGFGGEPGPQGEPGPPGDRGLKGENGVGQPGLPGAPGQGGAPGPPGLPGPAGL
GKPGLDGLPGAPGDKGESGPPGVPGPRGEPGALGPKGPPGVDGVGVPGSAGVPGPQGPAG
AKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGL
GGPPGLPGAAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGLPGERGLPGA
HGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGP
QGLPGLKGEPGLPGPPGEGKVGEPGMAGPTGPPGVPGSPGLTGPPGPPGPPGPPGAPGAF
DETGIAGLHLPNGGVEGAVLGKGVKPQFGLGELSAHTTPAFTAVLTSPFPASGMPVKFDR
TLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYL
DQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcggggggctctgacgcccctgccttcactctcgctacctctgctgctgctgctgctg
ctgctgctgctggggtgctggccgagggcggccgccggtggtggggccgccggggcagcg
ggctacgcgccggtgcagtacgtgcagcccatgcacaaaggaccggtggggccgcccttc
cgcgagggcaagggccagtacctggaaatgcctctgccgctgctgccgatggacctgaag
ggggagcctggcccccctgggaagcccggacctcggggtccccctggccctcctggcttc
ccaggaaaaccaggcaccggaaaaccagggctacatgggcagcctggccctgctggccca
cctggcttctcccggatgggcaaggctggtcccccagggctcccaggcaaggttggaccc
ccagggcagccagggcttcggggggagccagggatacgaggggaccagggcctccggggg
cccccaggacctcctggcctacctgggccctcaggcattgctgtccctggaaaaccaggc
ccccagggggtgccaggacccccaggatttgggggggagccagggcctcagggagagcct
gggcctccgggtgatcgaggcctcaagggggaaaatggagtgggtcagccagggctacct
ggagccccagggcaggggggtgcccctgggccccctggcctccctggtccagctggttta
ggcaaaccaggtttggatgggcttcctggggcccctggagataagggtgagtcaggtcct
cctggggtgcctggacccaggggggagccaggggctttgggccccaaggggccccctggg
gtggatggtgtgggggtaccagggtcagcaggggtgccagggccacagggcccagcaggg
gctaaaggggagccagggacccggggcccccctggcctgataggccccactggctatggc
atgccagggctgccaggtcccaagggggacaggggcccagctggggtcccggggctcttg
ggggacaggggtgagccaggtgaggatggggagccaggggagcagggcccacagggactt
ggggggccgcctggacttccaggggctgcagggctccctggcagacgtgggccccctggg
cctaagggggaggcagggcctggaggacccccaggagtgcctggcattcggggtgaccag
ggacctagtggcctggctgggaaacctgggctcccgggagagagggggcttccaggggcc
catggaccccctggaccaactgggcccaaaggtgagccaggtttcacaggccgccctgga
ggaccaggggtggcaggagccctggggcagaagggtgacttggggctccctgggcagcct
ggcctgagaggcccttcaggaatcccaggactccagggcccagctggccctatcgggcct
cagggtctgccaggcctgaagggtgaaccaggcctgccagggccccctggggaggggaag
gtcggggaacctggcatggctgggcccacagggccccccggggtccctggttctccagga
ctcacgggccctcctgggcctcccgggcctcctggcccccctggtgcccctggggccttt
gatgagacgggcatcgccggcttgcacctgcccaacggtggcgtggagggagctgtgctg
ggcaagggggtcaagccacagtttgggctgggggagctgtcggcccataccacgcccgcc
ttcaccgctgtgctcacgtcgcccttccccgcctcgggcatgcccgttaagtttgaccgg
actctctacaacgggcacagtggctacaacccagccacgggcatcttcacctgccctgtg
ggcggggtctactactttgcttaccacgtacacgtcaagggcaccaacgtgtgggtggcc
ctgtacaagaacaacgtgcctgccacctacacctatgacgagtacaagaagggctacctg
gaccaggcgtccggcggggctgtgctgcagctgcggcccaatgaccaggtctgggtgcag
atgccctcggaccaggccaacggcctctactccaccgagtacatccactcctccttttca
ggattcttgctgtgccccacataa
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