KEGG   Sus scrofa (pig): 100525603
Entry
100525603         CDS       T01009                                 
Symbol
UBAP2
Name
(RefSeq) ubiquitin-associated protein 2 isoform X4
  KO
K26545  ubiquitin-associated protein 2
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100525603 (UBAP2)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100525603 (UBAP2)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    100525603 (UBAP2)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100525603 (UBAP2)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N UBA_8 UBA DUF1510 Methyltransf_32 CUE API5
Other DBs
NCBI-GeneID: 100525603
NCBI-ProteinID: XP_005668123
Ensembl: ENSSSCG00000010987 ENSSSCG00000021050
UniProt: A0A480I0M7
LinkDB
Position
10:32755707..32897260
AA seq 1100 aa
MMTSVSNDRSRGAREKPQISVTQTTQLQKQVVQATAEQMRLAQVIFDKNDSEFEAKVKQL
MEVTGKNQDECIVALHDCNGDVNKAINILLEGNSDTTSWETVGGKKKNFGKDSSENKENR
EKRSEREVSRGRGNNNRKGRGGNRGREFRGEENGIDSNQGDKPSDRGKRARGRGFGRGRG
RGAGRFSTQGMGTFNPADYSDSPSIDGCGTKPVVWEAVQNGADEGTGAWKNSVEEWTTED
WTEDLSETKVFTSSSVPAENHVTPGQSVDLVALLQKPVPQASEVNSFESSQQQGFGQALV
FTNSQHNNQIAPGNGSSTTVNSYSPQSLSSVLGSGFGELAPSKMANITSSHILDQLKAPG
LGQFTTTPSSQQNSTSPPTTTSSWDLKPSASQSSVLSHFDFKSQPEPSPVLSQLSQRQQH
QTQAVSVPPPGLEPFPSQVKLRESAPRDSSASTVHKLLQLPSMTVENMTVSAHPPQPKHV
KLPKRRMPPASKIPASAVEMPGSADVTGLNVQFGALEFGSEPSLSEFGSVASSETSSQIP
ISLYSKSLSDSLNTSLPMTSAVQNSTYTTSVITSSSLTSSSLSSTSPVTTSSSYDQSSVH
NRIAYQSSVSPSESAPGTIANGHGGSRSQQTIDTPKTTDPPSALPSAGSLPSTTSCAPLL
SSASQHTATLPSLSQPGDLSSSPLSQLSSSLSGHQSSLSSSTSHTHASVESAPPLQPSAT
FSTAATSASSATSSGLSLPSSMNTVSSLCLGATAASAPSSSTRATPLVTSGKAPPNLPQG
VPPLLHNQYLVGPGGLLPAYPIYGYDELQMLQSRLPMDYYGIPFATPPALASRDGSLTNN
PYSGDVTKFGRGDSASPAPATTLAQPQQSQSQAHHTAQQPFLNPALPPGYSYTGLPYYAG
VPSAFQYGPTMFVPPASAKQPGVSLSTPTPPFQQAGGYGQHSYSTGYDDLTQGTAAGDYT
KGGYGGSSQAQNKSAGSGPGKGVSASSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPPF
SLPSALGSTGPLAPGAAPGYVPPPFLHILPAHQQPPSQLLHHHLLQDAQSGSGQRSQPSS
LQPKSQASKPAYGNSPYWTN
NT seq 3303 nt   +upstreamnt  +downstreamnt
atgatgacttcagtgagcaatgaccggtccagaggtgctcgggaaaaaccacagatttca
gtgacacagacaacacagctacagaaacaagtggtacaggcaacagctgaacagatgcgt
ctcgctcaagtgatctttgataaaaatgactcagagtttgaagctaaagttaaacagctt
atggaagtgacaggaaaaaatcaggatgaatgcatagtggccctacatgactgtaatgga
gatgtcaataaagctatcaatatattgctggaagggaattcagacacaacttcatgggag
acggtaggagggaagaagaagaattttggaaaagacagttcagaaaacaaagagaataga
gagaagagaagtgagagagaagtgagtcgtggacgtggaaacaacaaccggaaaggaaga
ggtggcaatcgtgggagagagtttagaggtgaagagaatggaattgactccaatcaaggg
gacaagccttcggatcgtggcaagcgagctcgtggaagaggatttggacgtggcagaggg
agaggggcaggaagattctcaacccaaggcatggggacgtttaatcctgcggactattca
gattctccatctatagatgggtgtgggacaaaacctgtagtttgggaagctgttcagaat
ggtgcagatgagggaactggagcctggaagaattctgtggaagagtggacgacagaagac
tggactgaagatctatctgaaacaaaagtcttcacttcctcatctgtccctgcagagaat
catgtcacacctgggcaaagcgttgatctggtagccttgctccagaagcctgttcctcaa
gcctcagaagtcaactcctttgaaagttcccaacagcagggctttggccaagcccttgtc
ttcacaaattctcagcacaacaatcagattgcaccaggaaatggcagctccacaaccgtc
aactcctattctcctcagagtctgtcatccgtccttggttcaggatttggagagcttgca
ccttcaaaaatggcaaacatcaccagctcccacattttggaccagttgaaagctccgggc
ttgggccagtttactaccaccccaagttcacagcagaatagtacgagccctcccacaacc
acttcttcttgggacctcaagccctcagcatcccagtcctcagtccttagtcatttcgac
ttcaaatctcagcctgaaccatcccctgttctaagccagctgagccagcgacagcaacac
cagactcaggcagtctctgtgcctcctcctgggttggagccctttccttcccaggtgaaa
ctccgagagtcagcacccagagacagcagtgcctccactgtgcacaaactgttgcagctt
ccaagtatgactgtggaaaacatgaccgtgtctgctcacccaccgcagccaaaacatgtc
aaactccctaagcggcggatgcctccagcttctaagatcccagcttctgcggtagaaatg
ccaggttcagcagatgtcacaggattaaatgtccagtttggagccttggaatttggatca
gaaccttctctctctgaattcggatcagttgcaagcagtgaaactagtagtcagattccc
attagcttgtattcgaaatctttaagtgattctttgaatacctctctgcccatgaccagt
gcagtacagaactccacctatacaacttcagtcattacctcctccagtctgaccagctca
tcgctgagctccactagtccagtgacaacgtcttcctcctacgaccagagttctgtgcat
aacaggattgcataccaaagctctgtgagtccatcggagtcagctccaggaaccatcgcg
aatggacatggtggtagtcgaagtcagcagacaatagacactccaaagacaaccgaccct
ccctccgccctcccatccgcgggctccctgcccagcaccacctcgtgcgctccgcttctg
tcctctgcatcccagcacactgccactttgccctccttgtcccagcctggtgacctgtcc
agcagccccctctctcagcttagcagctccctctctggccatcagagcagcctctcctcc
agcacatcacacacacatgccagcgtggagagcgcccctcccctccagccctcagccacc
ttctccacggcagccacctctgcctcgagtgccacgtcctcagggctcagcctgccaagc
agcatgaacacagtgagcagcctctgcctgggcgccaccgccgccagtgcccccagcagc
agtaccagggccacgcccttggtgacctcaggcaaagcaccccccaacttgccccagggg
gtgcctcccctgctgcacaaccagtacctcgtgggccctggaggactgcttcctgcctac
ccgatttacggctatgacgagctccagatgctgcagtcccggctgccaatggattactat
gggattccttttgccacaccgccagccctggccagtcgagatgggagcctcactaataac
ccatattcaggtgatgtcacaaagtttggccgaggtgactctgcatcccctgcacctgcc
accacgctggctcagcctcagcagagccagtcccaggcccaccacacagcccagcagccc
tttctgaatcctgcgctgccccctggctacagctacaccggcctcccctactacgcggga
gtgcccagtgccttccagtatgggcccaccatgtttgtccctccggcctcagccaagcag
cctggtgtgagcctcagcacccccacgccccctttccaacaggccggtggttatggccag
cacagctacagcacaggttatgacgacctgacccaggggacagcagctggggactacacc
aagggtggctatggtggatcatcgcaggcacaaaacaaatctgcaggctctgggcccggc
aaaggagtgtcggcgtcttcaagcaccactggcctccctgatatgacaggttctgtctac
aacaagactcagacttttgacaagcagggatttcatgctgggaccccgcccccgccgttc
agcctgccctcggccttgggctccactgggcccctggcccctggagctgcccccggttac
gtgcccccgcctttcttgcacatcctgcctgcccaccagcagcctccctcacagctgtta
caccaccacctcctgcaggatgctcagagtggctccggccagcgcagccagcccagctcc
ctgcagcccaagtcgcaagcctccaaacctgcttacggcaactctccgtactggacaaac
tga

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