Sus scrofa (pig): 100525610
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Entry
100525610 CDS
T01009
Symbol
STAG1
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100525610 (STAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100525610 (STAG1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100525610 (STAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
RFX5_DNA_bdg
Cnd3
Motif
Other DBs
NCBI-GeneID:
100525610
NCBI-ProteinID:
XP_020926780
Ensembl:
ENSSSCG00000026048
ENSSSCG00000029534
UniProt:
A0A8D1GH07
A0A4X1TM98
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All DBs
Position
13:complement(77321872..77863533)
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AA seq
1258 aa
AA seq
DB search
MITSELPVLQDSTNETTAHSDAGSELEETEVKGKRKRGRPGRPPSTNKKPRKSPGEKSRI
EAGVRGTGRGRANGHPQQNGEGEPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDIALLDL
INFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCE
FIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNL
SIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRY
RDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTN
RELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLV
YSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEH
AAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQAAEAH
PPVGRGTGKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFD
LEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQ
LIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLL
KTGIEHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKEDLLVLRKTVKSFLAVCQQCL
SNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDHVFID
QDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMKYYNDY
GDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELARRFA
LTFGLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLEVLSEFSSKLLRQDKK
TVHSYLEKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNSGSSSSKTSSVRNKKG
RPPLHKKRVEDESLDNTWLNRTDTMIQTPGPLPAPQLTSTVLRENSRPMGEQIQEPESEH
GSEPDFLHNPQMQISWLGQPKLEDLNRKDRTGMNYMKVRTGVRHAVRGLMEEDAEPIFED
VMMSSRSQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMPMF
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgattacttcagagttaccagtgttacaggattcaactaatgaaactactgcccattct
gatgctggcagcgaacttgaagaaacagaagtcaaaggaaaaagaaaaaggggtcgacct
ggccggcctccgtctacaaataagaaacctcgaaaatctccaggagagaagagtagaatt
gaagctggagttagaggaacaggccgtggaagagctaatgggcaccctcaacagaatggt
gaaggggagcctgtcacattatttgaagtggtgaaactggggaaaagtgcaatgcagtcc
gtggtcgatgactggattgaatcatataaacaagacagggacatcgcacttctggattta
atcaacttttttatccagtgttcaggatgtcgaggtactgtgagaatagagatgtttcga
aatatgcagaatgcagaaatcatcagaaaaatgactgaagaatttgatgaggacagtggt
gattatccccttacaatgcctggaccccagtggaaaaaatttcgttcaaacttttgtgaa
tttattggagtcctgattcgacaatgtcagtatagcataatttatgatgagtacatgatg
gacacagtaatctcccttttgactggcttgtcagactcccaggtcagagcttttaggcat
acaagtacccttgctgccatgaagctcatgactgctctggtgaatgttgccttaaacctc
agtattcatcaggataatacacagagacaatatgaagctgagagaaataaaatgattggg
aagagagccaatgaaaggttggagttactacttcaaaaacgcaaagagctacaagaaaat
caggatgaaattgaaaatatgatgaactctatttttaagggtatatttgttcatagatac
cgtgatgctattgctgagattagagccatttgtattgaagaaattggagtgtggatgaaa
atgtatagtgatgcttttctaaatgacagttacctgaaatatgttggctggactcttcat
gatcggcaaggagaagtcaggctgaagtgtttgaaagctctacaaagtctgtataccaat
agagaattatttcccaaattggagctattcactaaccgattcaaggatcgcattgtatca
atgacacttgataaggaatatgacgttgctgtggaagctattcgattggttactctgata
cttcatggaagtgaagaagctctttccaatgaagactgtgaaaatgtttaccacttggta
tactcagcacatcgccctgttgctgtggcagctggagaattccttcacaaaaagctgttt
agcagacatgacccacaagcagaagaagcactagcaaagaggaggggcagaaacagtcca
aatgggaaccttattaggatgctggttcttttctttcttgaaagtgagttacatgaacat
gctgcctacttggtggacagtttatgggagagctctcaagaactgttgaaagactgggaa
tgtatgacagaattgctattagaagaacctgttcaaggagaggaagcaatgtctgaccgt
caggagagtgcccttatagaactaatggtttgtacaattcgtcaagctgctgaggcacat
cctccagtgggaaggggtaccggcaagagagtgctaactgccaaagaaaggaaaactcaa
attgatgatagaaacaaattgacggagcattttattatcacacttcctatgttgctttca
aagtattctgcagatgcagagaaggtagcaaacttgctacaaatcccacaatattttgat
ctagaaatttatagcacaggtagaatggaaaagcatctagatgctttattaaagcagata
aagtttgttgtggagaaacatgtggaatcagatgttctagaagcctgcagtaaaacctat
agcatcttatgcagtgaagagtataccatccagaacagagtggacatagctcgaagtcaa
ctgattgatgagtttgtagatcgattcaatcattctgtggaagatctattacaggaggga
gaagaagctgatgatgatgatatttacaatgttctttctactttaaagcggttaacctct
tttcacaatgctcatgatctcacaaaatgggatctgtttggtaattgctacagattattg
aagactggaattgaacatggagctatgccagaacagatagtcgtacaggcactgcagtgt
tcccattactcgattctttggcagttggtgaaaattactgatggttctccttccaaagag
gatttgttggtattgaggaaaacagtgaaatcctttttggctgtttgccaacagtgccta
tctaatgttaatactccagtgaaggaacaggctttcatgttactctgtgatcttttgatg
atttttagccaccaattaatgacaggtggcagggagggccttcagcctttggtgtttaac
ccagatactggacttcagtctgaactcctcagttttgtgatggatcatgttttcattgac
caagatgaggagaaccagagcatggagggcgatgaagaagatgaagctaataaaattgag
gccttacacaagagaaggaatctacttgctgccttcagcaaacttatcatttatgatatt
gttgacatgcatgcagctgcagacatctttaaacactacatgaagtattacaatgactat
ggtgatattattaaggaaacactgagtaaaaccaggcagattgataaaattcagtgtgcc
aagaccctcattctcagtttacagcagttgtttaatgaacttgttcaagaacaaggtccc
aacctagataggacatctgcccatgtcagtggcattaaagaactggcacgtcgctttgcc
cttacatttggattggaccagatcaagacacgagaagcagttgccacacttcacaaggat
ggcatagaatttgcctttaaataccaaaatcagaaaggacaagaatatccacctcctaat
ttggctttcctggaagtactaagtgaattttcttctaagcttcttcgacaagacaaaaag
actgttcattcatacctagaaaaattccttacggaacagatgatggaaaggagagaagat
gtgtggcttccgctcatctcctatagaaattcgttagtcactggaggtgaagatgataga
atgtctgtcaacagtggaagtagcagcagcaaaacctcctcagtaagaaataagaaagga
cgacctccccttcacaaaaaacgagtagaggatgaaagcctggataatacgtggctgaac
agaactgacaccatgattcagactcctggtcccctgccggcaccacaactcacctccact
gtacttcgggagaatagccggcccatgggagagcagattcaggagcctgagtctgaacat
ggttctgaacctgactttttacacaatcctcagatgcagatctcttggttaggccagcca
aaattggaagacttaaatcgcaaggacagaacaggaatgaactacatgaaagtgcgaact
ggagtaagacatgctgttcggggcctaatggaggaagatgcagagcccatctttgaagat
gtgatgatgtcatcccggagccagttagaagacatgaatgaagaatttgaagacaccatg
gttattgacctgcccccatcaagaaatcggcgagagagagctgagctgaggccagatttc
tttgattctgcagctatcatagaagacgattcaggatttggaatgcctatgttctga
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integrated database retrieval system
