Sus scrofa (pig): 100525664
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Entry
100525664 CDS
T01009
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00562
Inositol phosphate metabolism
ssc01100
Metabolic pathways
ssc04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
100525664 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
100525664 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100525664 (SYNJ1)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
100525664 (SYNJ1)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
100525664 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
RRM_1
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
100525664
NCBI-ProteinID:
XP_013838012
Ensembl:
ENSSSCG00000012035
LinkDB
All DBs
Position
13:complement(196230101..196330512)
Genome browser
AA seq
1618 aa
AA seq
DB search
MRKRWTCWNGSDASGDCGCGCGRRRRRSRRKRAASEERRMAFSKGFRIYHKLDPPPFSLI
VETRHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAYGLLGVLRLNLGDTMLHYLVLV
TGCMSVGKIQESEVFRVTSTEFISLRVDSSDEDRISEVRKVLNSGNFYFAWSASGTSLDL
SLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKA
CLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLDDSVSSFIQIRGSVPLFWEQPG
LQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVNLLGSKEGEHMLSKAFQSHLKA
SEHAADIQMVNFDYHQMVKGGKTEKLHSILKPQVQKFLDYGFFYFNGSEVQRCQSGTVRT
NCLDCLDRTNSVQAFLGLEMLTKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSISKIYA
GTGALEGKAKAGKLKDGARSVSRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLT
TGSLRVSEQTLQSASSKVLKSMCENFYKYSKPKKIRVCVGTWNVNGGKQFRSIAFKNQTL
TDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNAGNIVNASTTNQKLWAVELQKT
ISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLF
HTTSLCFVCSHFAAGQSQVKERNEDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLP
NEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGKVTFAPTYKYDLFSDDYDTSEK
CRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDGSKILYTWTPGTLLHYGRAELKTSD
HRPVVALIDIDIFEVEAEERQNIYKLVIAVQGPPDGTVLVSIKSSLSENNFFDDALIDEL
LQQFTNFGEVILIRFVEDKMWVTFLEGSSALSALELNGKELLGRTITITLKSPDWIKNLE
EEMSLEKISVPLPSSTSSTLLGEDAEVTADFDMEGDVDDYSAEVEEILPQHLQPSSSSGL
GTSPSSSPRTSPCQSPTISEGPVPSLPVRPSRAPSRTPGHPASQSPFAGSPSDAPPAAQL
QQKDSCQPLEPKRPPPPRPVAPPAAPPARPAPPQRPPPPSGARSPAPARKEFGGIGGPPS
PGVARRELEAPKSPGTTRKDNIGRSQPSPQTGLSGPGPAGYSAARPMIPPRAGVISAPQS
HARVSAGRLTPESQSKPAEALKGPALLPEPLKPQAALPVQPSLPPAVQKMQEPLVPVAAP
LPPSAPQPSLETPPQPPPRSRSSHSLPADPPAQPQVKTNGVSAVRLDSPLKSDPFEDLSL
NLLTVLKDQFPVQTPDPEGLIPLPCATPGNTNTLSSASCMPTMPPIPARSKSQENTRCSP
NPFVTSSSGTNPFTDRTAAPGNPFRAGSQESEATSWFSQEQPVAQSPFPSLKPLGEIKPA
SSLEGFKDSFDPKGPPAVKVSNPRGWVTFEEEEDFGVAGRSRPTGPDSRGHQPSSSSGSK
VSFGDDWTPGTDVAFCVLPTRRPPPPPVPLHPPGAPAPAQPFTALASKASPELDLTER
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagagatggacctgctggaacggaagtgacgcttccggcgactgtggctgcggc
tgcggaagacggaggaggaggagccggaggaagagggctgcctctgaagaaaggagaatg
gcgttcagcaaaggatttcggatctatcacaaattggatcccccacctttcagcctcata
gtggaaactaggcataaggaagaatgtctcatgttcgagtctggggctgtagccgtgctc
tcatcagcagaaaaagaggcaatcaagggtacatattccaaagttctcgatgcatatgga
cttttaggtgttttacgattaaatcttggtgatactatgttacattatctggtcctagtc
actggatgtatgtctgttggaaaaattcaagaatctgaagttttccgagttacttccact
gaatttatttcactacgcgttgactcctcagatgaggatcgcatttcagaagtgcgaaaa
gtgctgaattcaggaaacttctattttgcatggtctgcatctggaaccagtttggatctg
agtcttaatgcccatcgtagcatgcaggaacacacaactgataatagatttttctggaat
cagtctttgcacttgcatctcaagcactatggtgtgaattgtgatgactggttattacgc
ctcatgtgtgggggagtagaaatcagaacaatttatgctgctcacaaacaggccaaggct
tgcctcatttccagactaagctgtgaacgtgctgggaccaggttcaatgtccggggaaca
aatgatgatggtcacgtcgctaatttcgtagaaactgagcaggttgtgtacttagacgac
tccgtttcttccttcatacaaatccggggatctgtccccttgttctgggagcaaccaggg
ctgcaggtgggatctcatcgtgtccgtatgtcaaggggcttcgaagccaatgcacctgct
tttgacaggcattttagaacactcaagaatttatacggtaaacaaataatagtaaatttg
cttggatctaaggaaggtgaacatatgctaagtaaggctttccagagtcatttgaaagct
tctgagcacgcagctgatatccagatggtgaattttgactaccatcaaatggttaaagga
ggaaagacagaaaaattacacagtattcttaaacctcaagtccaaaagtttctagattat
ggatttttttatttcaatggaagtgaagttcaaagatgccagagcggtacagttcggaca
aactgcttggattgtcttgatagaacaaatagcgtgcaggcattccttggtttagagatg
ctaactaaacagttggaagccctcggcctagctgaaaagcctcagttggtgactcgcttt
caagaagtttttcgatccatgtggtctgtgaatggtgattcaatcagtaagatttatgcg
ggaaccggagctcttgaagggaaggctaaggctggaaagttaaaagatggtgctcgttct
gttagtcgaacaatccagaataacttctttgacagctccaagcaagaggccattgatgtt
ttgctactaggaaataccctaaatagtgatttagctgacaaagctcgagcccttttaact
actggaagtttgcgtgtttctgaacagacattacagtcagcatcttctaaagtactaaag
agcatgtgtgagaatttctacaagtattcgaagcccaagaaaattcgagtatgtgtgggc
acctggaacgtgaatggcgggaagcagttccgcagcatagcttttaagaatcagaccctc
accgactggcttcttgatgcacccaagttagctggtatccaggagtttcaagataagaga
agtaagccaactgatatatttgcgattggttttgaagaaatggtagagttgaatgctggg
aacattgtgaatgccagcacaacaaatcagaagctctgggctgtggaactgcagaagacc
atctccagagacaacaagtacgtgttgctggcttccgagcagctggtgggcgtctgcctg
tttgtttttatcagaccacagcatgctccgttcatcagggatgttgcggttgataccgtg
aagactggaatgggaggtgcaactggaaataagggagcggtcgccattcgcatgctgttc
cacaccacaagcctctgcttcgtctgcagccactttgcagcaggacaatcacaagtcaaa
gagcgaaatgaagattttatagaaatagcgcggaagctgagtttcccaatgggaaggatg
ctcttttcccatgactatgtattttggtgtggtgattttaactaccgaatcgatctccct
aatgaagaagttaaggagctcataagacagcagaattgggattctcttatagcaggagat
caacttatcaatcagaaaaatgctggacagatttttaggggatttttagaaggaaaagta
acctttgctccaacatataaatatgatctgttttctgatgactatgacaccagtgaaaag
tgccgcacccctgcctggacagaccgtgtcctctggagaagaaggaaatggccttttgat
agatcagctgaagacttagatctcctaaatgccagtttccaagacggcagcaagatcctc
tacacgtggactcctggcactttgctgcactacggaagggcggagctgaagacgtcagac
cataggcctgtcgttgccctgattgatatcgatatatttgaagtcgaagctgaagagagg
caaaacatttataaactagtgattgcagttcaggggccgccagatggtacggtgttggtc
tccatcaaaagttctttatcagaaaataattttttcgacgatgctctgattgatgagctt
ctgcagcaatttacaaactttggtgaagttatactcataaggtttgtggaagataaaatg
tgggttacatttttggagggaagctctgccttgagtgctctagagctgaatggtaaagag
ttattgggtcggaccataacgattactttaaaaagtccagattggatcaaaaatttggaa
gaggaaatgagtttagagaaaatcagcgtcccactgccgtcatcaacaagctccacgctg
ctgggtgaagatgcggaggtcacggccgacttcgatatggaaggcgacgtggatgactac
agtgccgaggtggaggaaatccttccccagcatctccagccatcttcaagctctggcctc
ggcacatccccaagttcctcaccccggaccagtccctgccagtcacctacaatatcagag
ggtcctgtgccttcccttcccgtaagaccaagtcgagctccgtcgagaacgcctgggcac
ccagcttcacagagtccttttgcaggttctcctagcgatgctccgccagcagcacaactg
cagcagaaggattcttgccagcccttagaacccaagcggcctcctcctccccgcccggtt
gctcctcccgctgctcctcccgcgcgtccagctcccccgcaaaggccgcctccaccctca
ggggctaggagtcctgcacctgctagaaaagaatttggaggtattggaggccctcccagt
cctggggtagctaggcgagaactggaagcacccaaaagccctggaacgacacggaaagat
aatataggacgcagccagccttcacctcagacaggactctcgggcccaggacctgctgga
tacagtgcagccagaccgatgattccgccccgtgctggagtgatcagcgccccccagagc
cacgctcgggtgtccgctgggagactgacacctgaaagccagagcaaacctgcggaagca
ctgaaagggccagccctgcttcccgaaccactgaagcctcaggctgcccttccggtgcag
ccttccctgccccccgccgttcaaaagatgcaggagcctcttgtccccgtggcagcgccc
ctgcctccgtccgccccgcagcccagcctggaaaccccgccacagccgcccccccggagc
aggtcgtcacacagcttgccggccgatcccccggcccaaccgcaggtaaaaacaaacgga
gtctccgccgtcagactggactcgccattaaagagtgacccgtttgaagacctgtcgttg
aatctgcttactgtattaaaggatcagttccctgttcaaaccccagacccagaggggttg
attccgttgccttgcgcaaccccaggcaacacgaatactttgagttctgcaagctgcatg
ccgacaatgcctccaattccagcccggagtaaatcccaggaaaacacacgctgttcgcca
aacccattcgtcacgagctcgagcggcacaaaccctttcaccgacaggactgccgctccc
ggaaacccctttagagctgggtctcaagaatcagaggcaacttcatggttctcccaagaa
cagcctgttgctcagagtcctttcccttctctgaagcctcttggtgagatcaagcctgca
tcgtcgctggagggctttaaggacagttttgacccgaagggcccgcccgcagtcaaagtc
agcaaccccagaggctgggtgaccttcgaggaagaagaggactttggtgtggcagggagg
tcaaggcccactggtccagactcgcggggtcatcagccgagttcgtcctctggctccaag
gtgagcttcggtgatgactggactccaggtaccgatgttgctttctgtgtgttgcccacg
agaagacctcctcctccgcccgtccccctgcacccacccggcgcccccgctccagcacag
cctttcacggccttggcgtctaaggcatcacccgagctagatttgacagaaagataa
DBGET
integrated database retrieval system
