Sus scrofa (pig): 100526049
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Entry
100526049 CDS
T01009
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X1
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100526049 (HCN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100526049 (HCN3)
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
100526049 (HCN3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
100526049
NCBI-ProteinID:
XP_013852466
Ensembl:
ENSSSCG00000006518
LinkDB
All DBs
Position
4:complement(94545919..94560105)
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AA seq
784 aa
AA seq
DB search
MEAEQRPPTGTSDGATPGLEAAPPAAPASTTTASGPIPGSGPGPEPKRRQLGTLLQPTVN
KFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFF
KEENSPPWIVFNVLSDTFFLMDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLI
SSIPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIF
HMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSINHMVNHSWGRQY
SHALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRR
QYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFT
CRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLAR
GARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFET
VAMDRLRRIGKKNSILQRKRSEPSPGSSGGLMEQHLVQHDRDMARGVRGLAPGTGARLSG
KPVLWEPLVHAPLQAAAVTSNVAIALTHQRGPLPLSPDSPVTLLARSARRSAGAGSPASP
LVPVRAGPLLARGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGGGGRRLGPRGR
PLSASQPSLPQRAAGDGSPGRKGSGSERLPPSGLLAKPPGTAQPPRPPVPEPATPRGPQL
SANM
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagcagcggccgccgactgggaccagcgacggggcgacccctggactggag
gcggcgcctcctgctgccccggcgtctacgaccacggcctccggtccgatccctgggtcc
gggcccgggcctgagcccaagaggaggcagctcgggacgctgctccagcctacggtcaac
aagttctcccttcgtgtgttcggcagccacaaagcagtggaaatcgagcaggagcgggtc
aagtcagcgggggcctggatcatccatccctacagcgacttccggttttactgggacctg
atcatgctcctgctgatggtgggcaacctcattgtgctacctgtgggcatcaccttcttc
aaggaggagaactctccgccttggattgtcttcaacgtcctctctgacactttcttcctg
atggatctggtgctcaatttccgcaccggcattgtcgttgaggagggcgctgagatcctg
ctggcacctcgggccatccgtacacgctacttgcgcacctggttcctggtcgacctcatc
tcctctattcccgtggattacattttcctggtggtggagctggagccacgactggacgcc
gaggtctacaaaacagcgcgggccctgcgcatcgtgcgtttcaccaagatccttagcctg
ctgcggctgctccgcctctcccgcctcatccgctacatacaccagtgggaggagatcttt
cacatgacctatgacctggccagtgcggtggttcgcatcttcaacctcatcgggatgatg
ctgctgctatgtcactgggatggctgtctgcagttcctggtccccatgctgcaggacttc
cctcccgactgctgggtctccatcaaccacatggtgaaccactcgtggggccgccagtat
tcccacgccctgttcaaggccatgagccacatgctctgcattggctacgggcagcaggca
cctgtgggcatgcccgatgtctggctcaccatgctcagcatgatcgtgggcgccacgtgc
tacgctatgttcatcggccacgccaccgccctcatccagtccctggactcctcccggcgc
cagtaccaagagaagtacaagcaggtggagcagtacatgtccttccacaagctgccagcg
gacacacggcagcgcatccatgagtactatgagcaccgctaccagggcaagatgttcgat
gaggaaagcatcctaggcgagctgagcgaaccgcttcgggaggagatcattaacttcacc
tgccggggcctggtggcccacatgccgctgttcgctcacgccgaccccagcttcgtcacg
gctgtgctcaccaagctgcgctttgaggtcttccagccgggggacctcgtggtgcgtgag
ggctccgtgggcaggaagatgtacttcatccagcacgggctgctcagtgtgctggcccgc
ggtgcccgggacacccgcctcactgatggatcctactttggggagatctgtctgctgact
cggggccgccgcacagccagtgtgcgtgctgacacctactgccgcctctactcactcagt
gtggaccatttcaatgctgtgctcgaagagtttcccatgatgcgccgggccttcgagaca
gtggccatggatcggctgcgccgcatcggcaagaagaattccatactacagcggaagcgc
tccgagcctagtccgggcagcagtgggggcctcatggagcagcacttggtgcaacacgac
agggatatggctcggggtgttcggggcctggccccaggcacaggagctcggctcagcgga
aagccagtgctgtgggagcctctagtacacgcgcccctgcaagcagccgccgtgacctcc
aatgtggccattgccctgactcaccagcggggccctcttcccctctcccctgactctcca
gtcaccctccttgctcgctctgctcgaagatcagcaggagcaggctccccagcctcccca
ctggtacctgtccgagccggccctctgctggcccgggggccttgggcatccacctcccgc
ctgccggctccccctgccagaaccctccatgccagcctatcccgggctgggcgctcccag
gtgtccctgctgggcccgcctccaggtggaggtgggcggcgcctaggacctcggggccgc
ccactctcagcctcccaaccctcactgcctcagcgggcagcaggcgatggctctcctggg
cggaagggctcaggaagcgaacgcctgcccccctcagggctcctggccaagcctccaggg
acagcccagccccccaggccaccggtgcctgagccagccacgccccggggcccccagctc
tctgccaacatgtga
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