Sus scrofa (pig): 100526213
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Entry
100526213 CDS
T01009
Symbol
EDAR
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04060
Cytokine-cytokine receptor interaction
ssc04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100526213 (EDAR)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100526213 (EDAR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ssc04050
]
100526213 (EDAR)
Cytokine receptors [BR:
ssc04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
100526213 (EDAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
FAM176
Motif
Other DBs
NCBI-GeneID:
100526213
NCBI-ProteinID:
XP_013851326
Ensembl:
ENSSSCG00000008134
UniProt:
A0A8D0TM83
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All DBs
Position
3:47396303..47466234
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AA seq
461 aa
AA seq
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MKYVFQVKLWERMAHLGGRTRMAWLPVLVVSLVCPAGAEDATCGENEFYNQTTGLCHACP
PCGPGEEPYLSCGYGTKDEDYGCVPCPAEKFSKGGYQICRRHKDCEGFFRATVLTPGDTE
NDAECGPCLPGYYMLENRPRNIYGMVCYSCLLAPPNTKECTGATLGVSANFPRTPSSSTL
LPPQRAHKAEFSGQGHLATALVIAMSTIFTMAVAIVLIITFYILKARPSTPACCSSPPGK
SPEAPASEEEEKKEAQDNVVIFSEKDEFEKLTAAQAKSAKSENDASSEKEQLLNRSLDSD
EEPAPDRQGSPELCLLSLVHLAREKPVTATKAAGIQSRRKKILDVYANVCAVVEGLSPTE
LPFDCLEKTSRMLSATYNSEKAVVKTWRHLAESFGLKRDEIGGMTDGLQVFDRISTAGYS
VPELLTKLVQIERLDAVESLCADILEWAGVSPPTPQLPSAS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacgtgtttcaggtgaaactttgggagaggatggcacacctgggaggccgcaca
cggatggcctggctgcccgtcctggtggtatccctggtgtgcccggccggagcggaggat
gccacgtgtggcgagaacgagttttacaaccagaccacagggctgtgccatgcatgtccc
ccatgcgggccaggggaggagccctacctgtcctgtggctacggcaccaaagacgaggac
tacggctgtgtgccctgccctgctgagaagttctccaaaggaggctaccagatctgccgg
cgccacaaggactgcgaaggcttcttccgggccacggtgctgacgcctggggacacggag
aacgacgccgagtgcgggccctgtctccctggctactacatgttggagaaccggcctcgg
aacatctacggcatggtctgctactcctgcctgctggcgccccccaacaccaaggaatgt
acgggagccactttgggagtgtcagccaacttcccccgcacgcccagcagcagcaccctc
ttgccaccccagcgagcccataaagcagagttctcaggccaaggacacctggccacggcc
ctggtcatcgccatgtccaccatcttcaccatggccgttgccatcgtcctcatcatcacg
ttctacatcctgaaggccaggccttccaccccagcctgctgctccagtcccccagggaag
agcccagaagccccagccagcgaggaagaggagaaaaaagaggcccaagacaacgtggtg
attttctccgagaaggatgaattcgagaagctgacagcggctcaggcaaagtctgctaag
agtgagaatgacgcctcctcggagaaggagcagctgctaaaccggagtctagacagtgac
gaggagccagcccctgacaggcagggttccccagagctgtgcctcctgtccctagtccac
ctggcccgggagaagccggtcactgccaccaaggcggctgggattcagagtcgaaggaag
aagattctggatgtgtacgccaatgtgtgtgcagtcgtggaaggcctcagccccacggag
ctgccgttcgactgcctggagaagaccagccggatgctgagcgccacgtacaactcggag
aaggctgtggtcaagacatggcgccacctggccgagagcttcgggctgaagcgcgatgag
atcgggggcatgaccgacggcctgcaggtcttcgaccgcatcagcactgccggctacagc
gtcccagagctgctcacaaagctggtgcagatcgagcggctggacgccgtggagtccctg
tgtgccgacatcctagagtgggccggggtctcaccacccacgccccagctgccctctgca
tcctga
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