Sus scrofa (pig): 100620172
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Entry
100620172 CDS
T01009
Symbol
IRX5
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100620172 (IRX5)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
100620172 (IRX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
100620172
NCBI-ProteinID:
XP_020949823
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Position
6:complement(30511263..30515015)
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AA seq
484 aa
AA seq
DB search
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGADPAAAAAAAFSSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKPEDKGDPEGPEAGGAEQKAASGCERLQGPPPPAG
KETEGSLSDSDFKEPPSEGRLDALXGPPRAGGPSPAGPAAARLTEDPAPHYPTGAPAPGP
HPAAGELPPGPGGPSVIHSPPPPPPPQAVLAKPKLWSLAEIATSSDKVKDGGGGNEGSPC
PPCPGPVAGQALGSSRASPAPAPSRSPSAQCPFPGGTVLSRPLYYTAPFYPGYTNYGSFG
HLHGHPGPGPGPTTGPGSHFNGLNQTVLNRADALAKDPKMLRSQSQLDLCKDSPYELKKG
MSDI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatccgcagggctacttgtaccagccgtccgcctcgctggcgctctactcgtgc
ccggcgtacagcaccagcgtcatctcggggccccgcacggatgagctcggccgctcgtcg
tcgggctccgcgttctcgccctacgccggctccaccgccttcacggcgccctcgccgggc
tacaactcgcacctccagtacggcgccgaccccgcggcggcggcggccgccgccttctct
tcgtacgtgggctctccttacgaccacactccgggcatggcaggctccttggggtaccac
ccgtacgcggcgcccctgggctcatacccgtacggggaccccgcttaccggaagaacgcc
acccgagacgccaccgctacgctcaaggcctggctgaacgagcaccgcaagaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacccaggtg
tccacctggttcgccaacgcgcgtcggcgcctcaagaaggagaacaagatgacgtggacg
ccgcggaaccgcagcgaggacgaggaggaggaggagaacattgatctggagaagaacgac
gaagatgagccccagaagcccgaggacaagggcgaccccgagggccccgaagcaggagga
gcagagcagaaagcggcttcgggctgcgaacggctgcaggggccgcccccccccgccggc
aaagagaccgagggcagcctcagcgactcggattttaaggagccgccatccgagggccgc
ctggacgcgctgnccgggcccccccgcgccggcgggccctccccggctgggcctgcggca
gctcggctgaccgaggacccggcccctcactaccccaccggcgcgccggcacccggccca
cacccagccgcgggagagctgccccccggtcccggagggccctcggtcatacactcgccg
ccaccgccgccgccgccgcaggcggtgctcgccaagcccaaactgtggtctctggccgag
atcgccacatcctcggacaaggtcaaggacgggggcggcgggaatgagggctccccatgc
ccaccgtgccccgggccggtggccgggcaagccctaggaagcagccgtgcatcgccggca
cccgcgccatcgcgctcaccctcggcgcagtgcccctttccaggcgggacggtgctgtct
cggcctctctactacacggcgcccttctatcccggctacacgaactatggctccttcgga
caccttcacggccacccggggcccggcccaggccccacaacgggtccgggctcgcatttc
aatggattaaaccagaccgtgttgaaccgagcggacgctttggctaaagacccgaaaatg
ttgcggagccagtcccagctagacctgtgcaaagactctccctatgaattgaagaaaggt
atgtccgacatttaa
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integrated database retrieval system
