Sus scrofa (pig): 100620395
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Entry
100620395 CDS
T01009
Symbol
GIGYF1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100620395 (GIGYF1)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100620395 (GIGYF1)
Surveillance factors
Other surveillance factors
100620395 (GIGYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
PRTase_3
Motif
Other DBs
NCBI-GeneID:
100620395
NCBI-ProteinID:
XP_013850931
Ensembl:
ENSSSCG00000007668
ENSSSCG00000027281
LinkDB
All DBs
Position
3:complement(8584546..8600126)
Genome browser
AA seq
1065 aa
AA seq
DB search
MAAETLNFGPEWLRALSSGSSMASPPPSPAMPKYKLADYRYGREEMLALYVKESKVPDEL
QDKEFAAVLQEEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGPPLGGTSRGRGS
TRSRGRGRGDSCFYQRSIEEGDGTFGRNPREIQRSQSWDDRGERRFEKSARRDGARSGFE
EGGAGPRKEHARSDSENWRSLREEQEEEEEGSWRLGAGPRRDGDRWRSASPDGGPRSAGW
REHGDRRRKFEFDLRGERGGCGEEEGRGGGGSSHLRRCRGPDGFDDDKDGLPEWCLDDED
EEMGTFDASGAFLPLKKGPKDPIPEEQELDFQGLEEEEEEPPEGLEEEGPEAGVKELTPL
PPQDEQSSSPSPLPTLGPLWGANGEGDDAVDKDLPAAEGDDTRGMQLSPGVGSPPGPPGD
LEDDEGLKHLQQEAEKLVASLQDSSLEEEQFTAAIQAQGLRHSAAATALPLSHGAARKWF
YKDPQGEIQGPFTTQEMAEWFQAGYFSMALLVKRGCDEGFQPLGEVIKMWGRVPFAPGPS
PPPLLGNMDQERLKKQQELAAAALYQQLQHQQFLQLVSSSRQLPQCALREKAALGDLPPP
QQQQLTAFLQQLQALKPPRGGDQNLLPTMNRSLSVPDSGPLWDIHTSASSQSGGEASLWD
IPINSSTQGPILEQLQLQHKFQERREVELRAKREEEERKRREEKRRQQQQEEQKRRQEEE
ELFRRKQVRQQELLLKLLQQQQAVAAVPTPPAPSSPPPLWAGLAKQGLSMKTLLELQLEG
ERQMHKQPPPREPSRAQAPNHRVQLGGLGTAPLNQWVSEAGPLWGGPDKSGGSSGLGLWE
DTLKSSGSLARSLGLKNSRSSPSLSDSYSHLSGRPVRKKTEEEEKLLKLLQGIPRPQDGF
TQWCEQMLHTLSTTGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERR
AKQKASQQRQQQQEAWLSSGSLQTAFQTNHSTKLSPGEGSKAKRRALMLHSDPSILGEFG
GGAGEEAPSSVPGRSLGSRAQTQLPPASGYSLHGPSGEIESVDDY
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagaccctcaactttgggcctgagtggctgagggccctttctagtggtagc
agtatggcctccccacccccgtcccctgccatgcccaaatacaagctggctgactatcgc
tacgggcgagaggagatgctggccctctatgtcaaggagagcaaggtccctgatgagctg
caggacaaggagtttgctgcggtgctgcaggaggagccactgcagcccctggcgctggag
cctctgactgaggaggagcagagaaacttctccctgtcagtgaacagtgtggctgtgctg
aggctgatggggaaaggggctggtccccccctaggtggcacctcccgtggcaggggcagc
acacggagccgaggccgaggccgtggtgacagttgcttttaccaaagaagcattgaagaa
ggcgatgggacctttggccgaaacccccgggagatccagcgtagccagagttgggatgac
agaggcgagagacggtttgagaagtcagccaggagggatggagcacgatccgggtttgag
gagggaggggctggcccgaggaaggagcatgcccgctcagatagcgagaactggcgttct
ctccgagaggagcaagaggaagaggaagagggcagctggagactcggggcaggaccccgg
cgagatggcgaccgctggcgctcagccagccctgatggcggcccccgctcggctggctgg
cgggaacatggggaccggcgtcgaaagtttgaatttgatttgcgaggggagcgaggcggg
tgtggtgaagaggaggggcggggtgggggaggcagctctcacctccggaggtgccgaggg
cccgacggatttgatgatgacaaggacgggctcccggagtggtgcctggacgacgaagat
gaagaaatgggcaccttcgacgcctccggggccttcttgcccctcaagaagggccccaag
gaccctattcctgaggagcaggagctcgacttccaggggctggaggaggaggaggaagag
ccgccggaagggctggaggaggaggggcctgaggcaggcgtgaaggaactgacccccctg
cctcctcaggatgagcagtccagctccccatccccactgcccaccttgggcccgctctgg
ggagctaacggggagggcgatgatgctgtggacaaagacctgccagccgctgaaggagac
gacacgaggggtatgcagctgagtcctggtgtgggctcaccccctggccctccaggagat
ctggaagatgatgaaggcttgaagcacctgcagcaggaggcagagaagctcgtggcctcc
ctgcaggacagctccctggaggaggagcagttcacagctgccatacaggcccagggcctg
cgccactcggcagctgccacggccctccccctcagccacggcgcagcccggaagtggttc
tacaaggacccacagggggagatccaaggccctttcacgacacaagagatggcagagtgg
ttccaggccggctacttctccatggccctgcttgtgaagcggggctgtgatgagggcttc
cagccactgggtgaggtgatcaagatgtggggtcgtgtgccctttgccccggggccctca
ccacccccactgctgggaaacatggaccaggagcggctgaagaagcaacaggaactcgcg
gcagcggccttgtaccagcagctgcagcaccagcagtttcttcagctggtcagcagcagc
cgccagctcccgcagtgtgctctccgggagaaggcagctctgggggacctgccgccaccg
cagcagcagcagctcaccgcattcctgcagcagcttcaagctctcaaaccccccaggggt
ggggaccagaacttgctcccgacgatgaatcggtccttgtccgtgccagactcgggcccc
ctctgggacatacatacctcagcctcatcacagtcaggcggtgaggccagtctttgggac
ataccaattaactcttcgactcagggtccaattctagaacaactccagctgcaacataaa
ttccaggagcgcagagaagtggagctcagggcgaagcgggaggaggaggagcgcaagcgc
cgggaggagaagcgccgccaacagcagcaggaggaacagaagcggcggcaggaggaagag
gagctgtttcgacgcaagcaggtgcggcagcaggagcttctgctgaagctgctccagcag
cagcaggccgtggctgctgttcctacgcctcctgcgcccagttccccgcccccattgtgg
gccggcctggccaagcagggactatccatgaagacgctgctggagctacagctggagggc
gagcggcagatgcataagcagcccccacctcgggagccgtcacgggcccaggcccccaac
caccgtgtgcagcttgggggcctgggcaccgcccccctgaaccagtgggtgtctgaggct
gggccgctgtggggcgggcccgacaagagtgggggcagcagcggcctgggactctgggag
gacaccctcaagagcagcgggagcctggcccgcagcctgggcttgaagaacagccgcagc
agcccctctctcagtgactcctatagccacctgtcaggtcggcctgtgcgcaaaaagaca
gaggaggaagagaagctgctgaagctgctacagggcatcccccggccccaggatggtttc
acccagtggtgtgagcagatgctgcacacgctgagcaccacaggcagcctagacgtgccc
atggctgtagcgatcctcaaggaggtggaatccccctacgacgtccatgactatatccgt
tcctgcctgggggacacgctggaagccaaagaatttgccaaacaattcctggaacggaga
gccaagcagaaggccagccagcagcggcagcagcagcaggaggcgtggctgagcagtggc
tccctgcagacggcctttcagaccaaccatagcaccaaactcagccctggggagggcagc
aaggccaagaggcgggcgctgatgctgcactcggaccccagcatcttgggtgagtttgga
ggcggggccggggaggaagctccttcctcagtgccaggcagaagcctgggtagcagagct
caaacccagcttcccccggcttcagggtactccctgcatggaccttctggtgagatcgag
agcgtggatgactactga
DBGET
integrated database retrieval system
