Sus scrofa (pig): 100620395
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Entry
100620395 CDS
T01009
Symbol
GIGYF1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100620395 (GIGYF1)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100620395 (GIGYF1)
Surveillance factors
Other surveillance factors
100620395 (GIGYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
PRTase_3
Motif
Other DBs
NCBI-GeneID:
100620395
NCBI-ProteinID:
XP_013850931
Ensembl:
ENSSSCG00000007668
ENSSSCG00000027281
LinkDB
All DBs
Position
3:complement(8584546..8600126)
Genome browser
AA seq
1065 aa
AA seq
DB search
MAAETLNFGPEWLRALSSGSSMASPPPSPAMPKYKLADYRYGREEMLALYVKESKVPDEL
QDKEFAAVLQEEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGPPLGGTSRGRGS
TRSRGRGRGDSCFYQRSIEEGDGTFGRNPREIQRSQSWDDRGERRFEKSARRDGARSGFE
EGGAGPRKEHARSDSENWRSLREEQEEEEEGSWRLGAGPRRDGDRWRSASPDGGPRSAGW
REHGDRRRKFEFDLRGERGGCGEEEGRGGGGSSHLRRCRGPDGFDDDKDGLPEWCLDDED
EEMGTFDASGAFLPLKKGPKDPIPEEQELDFQGLEEEEEEPPEGLEEEGPEAGVKELTPL
PPQDEQSSSPSPLPTLGPLWGANGEGDDAVDKDLPAAEGDDTRGMQLSPGVGSPPGPPGD
LEDDEGLKHLQQEAEKLVASLQDSSLEEEQFTAAIQAQGLRHSAAATALPLSHGAARKWF
YKDPQGEIQGPFTTQEMAEWFQAGYFSMALLVKRGCDEGFQPLGEVIKMWGRVPFAPGPS
PPPLLGNMDQERLKKQQELAAAALYQQLQHQQFLQLVSSSRQLPQCALREKAALGDLPPP
QQQQLTAFLQQLQALKPPRGGDQNLLPTMNRSLSVPDSGPLWDIHTSASSQSGGEASLWD
IPINSSTQGPILEQLQLQHKFQERREVELRAKREEEERKRREEKRRQQQQEEQKRRQEEE
ELFRRKQVRQQELLLKLLQQQQAVAAVPTPPAPSSPPPLWAGLAKQGLSMKTLLELQLEG
ERQMHKQPPPREPSRAQAPNHRVQLGGLGTAPLNQWVSEAGPLWGGPDKSGGSSGLGLWE
DTLKSSGSLARSLGLKNSRSSPSLSDSYSHLSGRPVRKKTEEEEKLLKLLQGIPRPQDGF
TQWCEQMLHTLSTTGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERR
AKQKASQQRQQQQEAWLSSGSLQTAFQTNHSTKLSPGEGSKAKRRALMLHSDPSILGEFG
GGAGEEAPSSVPGRSLGSRAQTQLPPASGYSLHGPSGEIESVDDY
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagaccctcaactttgggcctgagtggctgagggccctttctagtggtagc
agtatggcctccccacccccgtcccctgccatgcccaaatacaagctggctgactatcgc
tacgggcgagaggagatgctggccctctatgtcaaggagagcaaggtccctgatgagctg
caggacaaggagtttgctgcggtgctgcaggaggagccactgcagcccctggcgctggag
cctctgactgaggaggagcagagaaacttctccctgtcagtgaacagtgtggctgtgctg
aggctgatggggaaaggggctggtccccccctaggtggcacctcccgtggcaggggcagc
acacggagccgaggccgaggccgtggtgacagttgcttttaccaaagaagcattgaagaa
ggcgatgggacctttggccgaaacccccgggagatccagcgtagccagagttgggatgac
agaggcgagagacggtttgagaagtcagccaggagggatggagcacgatccgggtttgag
gagggaggggctggcccgaggaaggagcatgcccgctcagatagcgagaactggcgttct
ctccgagaggagcaagaggaagaggaagagggcagctggagactcggggcaggaccccgg
cgagatggcgaccgctggcgctcagccagccctgatggcggcccccgctcggctggctgg
cgggaacatggggaccggcgtcgaaagtttgaatttgatttgcgaggggagcgaggcggg
tgtggtgaagaggaggggcggggtgggggaggcagctctcacctccggaggtgccgaggg
cccgacggatttgatgatgacaaggacgggctcccggagtggtgcctggacgacgaagat
gaagaaatgggcaccttcgacgcctccggggccttcttgcccctcaagaagggccccaag
gaccctattcctgaggagcaggagctcgacttccaggggctggaggaggaggaggaagag
ccgccggaagggctggaggaggaggggcctgaggcaggcgtgaaggaactgacccccctg
cctcctcaggatgagcagtccagctccccatccccactgcccaccttgggcccgctctgg
ggagctaacggggagggcgatgatgctgtggacaaagacctgccagccgctgaaggagac
gacacgaggggtatgcagctgagtcctggtgtgggctcaccccctggccctccaggagat
ctggaagatgatgaaggcttgaagcacctgcagcaggaggcagagaagctcgtggcctcc
ctgcaggacagctccctggaggaggagcagttcacagctgccatacaggcccagggcctg
cgccactcggcagctgccacggccctccccctcagccacggcgcagcccggaagtggttc
tacaaggacccacagggggagatccaaggccctttcacgacacaagagatggcagagtgg
ttccaggccggctacttctccatggccctgcttgtgaagcggggctgtgatgagggcttc
cagccactgggtgaggtgatcaagatgtggggtcgtgtgccctttgccccggggccctca
ccacccccactgctgggaaacatggaccaggagcggctgaagaagcaacaggaactcgcg
gcagcggccttgtaccagcagctgcagcaccagcagtttcttcagctggtcagcagcagc
cgccagctcccgcagtgtgctctccgggagaaggcagctctgggggacctgccgccaccg
cagcagcagcagctcaccgcattcctgcagcagcttcaagctctcaaaccccccaggggt
ggggaccagaacttgctcccgacgatgaatcggtccttgtccgtgccagactcgggcccc
ctctgggacatacatacctcagcctcatcacagtcaggcggtgaggccagtctttgggac
ataccaattaactcttcgactcagggtccaattctagaacaactccagctgcaacataaa
ttccaggagcgcagagaagtggagctcagggcgaagcgggaggaggaggagcgcaagcgc
cgggaggagaagcgccgccaacagcagcaggaggaacagaagcggcggcaggaggaagag
gagctgtttcgacgcaagcaggtgcggcagcaggagcttctgctgaagctgctccagcag
cagcaggccgtggctgctgttcctacgcctcctgcgcccagttccccgcccccattgtgg
gccggcctggccaagcagggactatccatgaagacgctgctggagctacagctggagggc
gagcggcagatgcataagcagcccccacctcgggagccgtcacgggcccaggcccccaac
caccgtgtgcagcttgggggcctgggcaccgcccccctgaaccagtgggtgtctgaggct
gggccgctgtggggcgggcccgacaagagtgggggcagcagcggcctgggactctgggag
gacaccctcaagagcagcgggagcctggcccgcagcctgggcttgaagaacagccgcagc
agcccctctctcagtgactcctatagccacctgtcaggtcggcctgtgcgcaaaaagaca
gaggaggaagagaagctgctgaagctgctacagggcatcccccggccccaggatggtttc
acccagtggtgtgagcagatgctgcacacgctgagcaccacaggcagcctagacgtgccc
atggctgtagcgatcctcaaggaggtggaatccccctacgacgtccatgactatatccgt
tcctgcctgggggacacgctggaagccaaagaatttgccaaacaattcctggaacggaga
gccaagcagaaggccagccagcagcggcagcagcagcaggaggcgtggctgagcagtggc
tccctgcagacggcctttcagaccaaccatagcaccaaactcagccctggggagggcagc
aaggccaagaggcgggcgctgatgctgcactcggaccccagcatcttgggtgagtttgga
ggcggggccggggaggaagctccttcctcagtgccaggcagaagcctgggtagcagagct
caaacccagcttcccccggcttcagggtactccctgcatggaccttctggtgagatcgag
agcgtggatgactactga
DBGET
integrated database retrieval system
