Sus scrofa (pig): 100620497
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Entry
100620497 CDS
T01009
Symbol
SNTB2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04820
Cytoskeleton in muscle cells
ssc05410
Hypertrophic cardiomyopathy
ssc05412
Arrhythmogenic right ventricular cardiomyopathy
ssc05414
Dilated cardiomyopathy
ssc05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100620497 (SNTB2)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100620497 (SNTB2)
05412 Arrhythmogenic right ventricular cardiomyopathy
100620497 (SNTB2)
05414 Dilated cardiomyopathy
100620497 (SNTB2)
05416 Viral myocarditis
100620497 (SNTB2)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100620497
NCBI-ProteinID:
XP_020949533
Ensembl:
ENSSSCG00000028109
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All DBs
Position
6:complement(17674587..17774550)
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AA seq
540 aa
AA seq
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MRVAAPTAAAGAGPAMAVWTRATKAGLVELLLRERWVRVVAELSGESLSLTGDAAAAEPE
PALGPAAAAFNGLPNGGGAGDSLPGSPSRGLGPPSPPAPPRGPASEAGASPPVRRVRVVK
QEAGGLGISIKGGRENRMPILISKIFPGLAADQSRALRLGDAILSVNGTDLRQATHDQAV
QALKRAGKEVLLEVKFIREVTPYIKKPSLVSDLPWEGAAPQSPSFSGSEDSGSPKHQNST
KDRKVIPLKMCFAARNLSMPTWKNRLIELHSPDSRNTLILRCKDTATAHSWFVAIHTNIM
ALLPQVLAELNAMLGATSTAGGSKEVKHIAWLAEQAKLDGGRQQWRPVLMAVTEKDLLLY
DCMPWTRDAWASPCHSYPLVATRLVHSGSGCRSPSLGSDLTFATRTGSRQGIEMHLFRVE
THRDLSTWTRILVQGCHAAAELIKEVSLGCTLNGQEVRLTVHYESGFTISRENGGSSSIL
YRYPFERLKMSADDGIRNLYLDFGGPEGELTMDLHSCPKPIVFVLHTFLSAKVTRMGLLV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagggtagctgcgccgactgcggcggcgggagcggggccggccatggcggtgtggacg
cgggccaccaaagcggggctggtagaactgctccttagggagcgctgggtccgggtggtg
gccgagctgagcggggagagcctgagcctgacgggcgacgccgcggcggctgaaccagag
ccagctctagggcccgcggcggccgccttcaacggcctcccgaacggcggcggcgcgggc
gattcgctgcccgggagcccgagccgcggcctgggccccccaagtccacccgcgccgccg
cgaggcccggcgagtgaggcgggcgcgtcaccgccggtgcgccgagtgcgggtggtgaag
caggaggcgggcggcctgggcatcagcatcaagggcggccgcgagaaccggatgccgatc
ctcatctccaagatcttcccgggactggcggccgaccagagccgggcgctgcggctgggc
gacgccatcctgtcggtgaacggcaccgacctgcgccaggccacccacgaccaggccgtt
caggcactgaagcgcgcgggcaaggaggtgctgctggaggtcaagttcatccgagaagta
acgccatatatcaagaagccatctttagtatcagacctgccatgggaaggagcagctccc
cagtcaccaagcttcagtggcagtgaggactctggttctccaaaacaccagaacagcacc
aaggacaggaaggtcattcctcttaaaatgtgctttgctgctcgaaacttaagtatgccg
acctggaaaaacagattaatagagctacattctcctgatagcaggaacacgttgatccta
cgctgcaaggatacagccacagcacactcctggttcgtagctatccacaccaacataatg
gctctcctcccacaggtgttggccgaactcaatgccatgcttggtgcaactagtacagca
ggaggcagcaaggaagtcaagcacattgcctggctggcagaacaggcaaaactagatggt
ggaagacaacaatggagacccgtcctcatggctgtgactgaaaaggatttgctgctttat
gactgtatgccatggacgagggatgcctgggcatcaccatgtcatagctacccgcttgtt
gccacaaggttggtacattctggctccggatgtcgatcaccctcccttggatctgacctt
acatttgctaccaggacaggctctcggcagggcatcgagatgcatctcttcagggtggag
acacatcgggatctgtcaacctggacccgaatacttgttcagggttgccatgctgctgct
gagctgatcaaggaagtctctctaggctgcacgttaaatggtcaagaggtaagactcact
gtccactatgaaagtgggttcactatctccagggaaaatggaggttccagcagcatactg
taccgctacccctttgaaaggctgaaaatgtctgctgatgatggcatcagaaatctgtat
ctggattttggtggccctgagggagagctgaccatggacctgcactcctgtccaaagccg
attgtatttgtgttgcacacattcttgtcggccaaagtcactcgcatgggactgcttgta
tga
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