Sus scrofa (pig): 100620587
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Entry
100620587 CDS
T01009
Symbol
IRX2
Name
(RefSeq) iroquois-class homeodomain protein IRX-2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100620587 (IRX2)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
100620587 (IRX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
100620587
NCBI-ProteinID:
XP_020932486
UniProt:
A0A4X1TJT0
A0A287BF95
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All DBs
Position
16:78305869..78322776
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AA seq
473 aa
AA seq
DB search
MSYPQGYLYQAPGSLALYSCPAYGASALAAPRSEELARSASGSAFSPYPGSAAFTAQAAT
GFGSPLQYSADAAAAAAGFPSYMGAPYDAHTTGMSGAISYHPYGSAAYPYQLNDPAYRKN
ATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW
APRNKSEDEDEDEGDAARGKEESPDKAQEGTETSAEDEGISLHVDSLTDHSCSAESDGEK
LPCRAGDPLCESGSECKDKYDDLEDDEDDDDEGERDLAPPKPVTSSPLTGVEAPLLSPPP
EAAPRGGGGGKTPLGSRTSPGAPQPASKPKLWSLAEIATSDLKQPSLGPGCAPPGLPAAA
APASSGAPPGGSPYPASPLLGRHLYYTSPFYGNYTNYGNLNAALQGQGLLRYNSAAGAPG
EALHAAPKAASDAGKAGAHPLEAHYRPPGGGYEPKKDASEGCTMVGGGVQPYL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccgcagggctacctgtaccaggcgcccggctcgctggcgctctactcgtgc
ccggcgtacggcgcttcggcactggcggcgccgcgcagcgaggagctggcgcgctcggcg
tcgggctcggcgttcagcccttacccgggctccgcggccttcaccgcgcaggcggccacg
ggcttcgggagcccgctgcagtactcggccgacgccgccgccgccgccgccggcttcccg
tcctacatgggcgcgccgtacgacgcacacaccaccgggatgtctggcgccatcagctac
cacccttacggcagcgcggcctacccgtaccagctcaacgacccagcctaccgcaagaac
gccacgcgggacgccacggccacgctcaaggcctggctcaacgagcaccgcaagaacccc
taccccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacgcag
gtgtccacctggttcgccaacgcgcgccggcgcctcaagaaggagaacaagatgacgtgg
gcccccaggaacaaaagcgaggacgaggacgaggacgagggcgacgcggccaggggcaag
gaggagagtcccgacaaggcgcaggagggcaccgagacgtcggcggaggacgaagggatc
agtctgcacgtcgactcgctcacggatcactcgtgctccgccgagtcggacggggagaag
ctgccgtgccgcgccggggaccccctgtgcgagtcgggctccgagtgcaaggataagtac
gacgacctggaggacgacgaggacgacgacgacgagggcgagcgggacctggcgccgccc
aagcccgtgacctcgtcgccgctcaccggcgtggaggcgccgctgctgagccccccgccc
gaagccgcgccccgcggcggcggcggcggcaagacgcccctgggcagccggacgtcaccg
ggcgcgccgcaacccgccagcaagcccaagctgtggtctctggccgagatcgccacgtcg
gacctcaagcagccgagcctgggcccgggctgcgcgccgccggggctgcccgcggccgcc
gcgcccgcctcgtccggggcgccgccgggcggctcgccctaccccgcgtcgccgctgctc
ggccgccatctctactacacgtcgcccttctacggcaactacacaaactacgggaacttg
aacgccgcgctgcagggccagggcctcctgcgctacaactcggcggccggggcccccgga
gaggcgctgcacgccgcgcccaaggccgccagcgacgcgggcaaggcgggcgcgcacccg
ctggaggcgcactaccggcccccgggcggcggctacgagcccaagaaagatgccagtgag
ggctgcaccatggttggtgggggcgtccagccctacctatag
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