Sus scrofa (pig): 100620623
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Entry
100620623 CDS
T01009
Symbol
SPOCK1
Name
(RefSeq) testican-1 isoform X2
KO
K08136
testican
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssc00535
]
100620623 (SPOCK1)
Proteoglycans [BR:
ssc00535
]
Extracellular matrix (ECM) proteoglycans
Others
100620623 (SPOCK1)
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GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
100620623
NCBI-ProteinID:
XP_003354335
UniProt:
A0A4X1V4C9
A0A286ZS89
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Position
2:complement(139018177..139523601)
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AA seq
439 aa
AA seq
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MPAIAVLAAAAAAWCFLQVESRHLDALAGGAGPNNGNFLDNDQWLSTVSQYDRDKYWNRF
RDDDYFRNWNPNKPFDQALDPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKG
NVAHKHWVGPSNLVKCKPCPAIQSAMVCGSDGHTYTSKCKLEFHACSTGKSLTTLCDGPC
PCLPEPEPPKHKAEKNACTDKELRNLASRLKDWFGALHEDANRVIKPTSSDAAQGRFDTS
ILPICKDSLGWMFNKLDMNYDLLLDHSEINAIYLDKYEPCIKPLFNSCDSFKDGKLSNNE
WCYCFQKPGGLPCQNEMNRIQKLSKGKSLLGAFIPRCNEEGYYKATQCHGSTGQCWCVDK
YGNELAGSRKQGAVSCEEEQETSGDFGSGGSVVLLDDLEDERELGPKDKRGKARVHIRAV
TEDDEDEDDDKEDEVGYIW
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgatcgcggtgctcgcggcggccgccgcggcgtggtgcttcctgcaggtcgag
agccggcacctggacgcgctcgccgggggcgcgggccccaacaacggcaatttcctagac
aatgaccagtggctgagcacagtctcccagtacgaccgggacaagtactggaaccgcttt
cgagatgatgattatttcagaaactggaatcccaacaagccttttgaccaagccctggac
ccatccaaagacccctgcctgaaggtgaagtgcagccctcacaaggtgtgcgtgacccag
gactaccagaccgccctgtgcgtcagccgcaagcacctgctccccaggcaaaagaagggg
aacgtggcccacaaacactgggttggaccttcgaatttggtcaagtgcaagccctgtccc
gcgatacagtccgccatggtctgcggctctgatggccacacctatacatccaagtgcaag
ttggagttccatgcttgttccactggcaagagtctcaccaccctctgtgatgggccctgt
ccgtgtctcccggaacccgagccgccaaaacacaaggcagaaaagaatgcctgcacggac
aaggagttgaggaacctcgcttcccggctcaaagactggttcggggcgcttcatgaggat
gccaacagagtcatcaagcccaccagctccgacgcagcccaaggcaggtttgacaccagc
atcctgcccatctgcaaggactccttgggctggatgttcaacaagttggacatgaactac
gacctcctgcttgaccactcagagatcaacgccatctacctggataagtacgagccctgt
atcaagcctctcttcaattcgtgtgactcctttaaggatggcaagctctccaacaatgag
tggtgctactgcttccagaaacctggaggtctcccttgccagaatgaaatgaacaggatt
cagaagttgagcaaaggaaaaagcctgttgggggcgttcatacctcggtgtaatgaggag
ggctattacaaagccactcagtgccacggcagcacagggcagtgctggtgtgtggacaag
tacggaaacgagctcgctggctccaggaaacagggcgctgtgagctgtgaagaggagcag
gaaacttcaggggattttggcagcggcggctctgtcgtcctcctggatgacctggaggat
gaacgggagctgggccccaaggacaagcgggggaaggcaagggtgcacatccgggcagtt
acggaggatgatgaggacgaggacgacgacaaggaggatgaggttgggtacatatggtag
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