Sus scrofa (pig): 100620808
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Entry
100620808 CDS
T01009
Symbol
STXBP5L
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100620808 (STXBP5L)
Membrane trafficking [BR:
ssc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100620808 (STXBP5L)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
100620808 (STXBP5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
EIF3I
Lgl_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
RAB3GAP2_N
Synaptobrevin
Beta-prop_EML
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
100620808
NCBI-ProteinID:
XP_020925943
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All DBs
Position
13:complement(139116931..139491227)
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AA seq
1265 aa
AA seq
DB search
MKKFNFRKVLDGLTASSPGSGSSSGSNSGGGAGSGSVHPGGTAGVLREEIQETLTSDYFQ
ICKTVRHGFPYQPTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQLQFL
INEGALVSASSDDTLHLWNLRQKRPAILHSLKFNRERITYCHLPFQSKWLYVGTERGNTH
IVNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTVVFWDLKS
KRAELRVYYDEAIHSIDWHHEGRQFMCSHSDGSLTLWNLKSPSRPFQTTIPHGKSQREGR
KPESCKPILKVEYKTCRNSEPFIIFSGGLSYDKACRRPSLTIMHGKAITVLEMDHPIVEF
LTLCETPYPNEFQEPYAVAVLLEKDLIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFAD
CPPDLILVLYSIGVKHKKQGYSNKEWPISGGAWNLGTQTYPEIIITGHADGSIKFWDASA
ITLQMLYKLKTSKVFEKQKVGEGKQTCEIVEEDPYAVQMMYWCPESRIFCVSGVSAYVII
YKFSRHEITTEIVSLEVRLQYDIEDIITPEPETSPPFPDLSSQLPSSRSLSGSTNTVSSE
GVTKDSIPCLNVKTRPVRMPPGYQAELVIQLVWVDGEPPQQITSLAISSAYGIVAFGNCN
GLAVVDFIQKTVLLSMGTIDLYRSSDLYQRQPRSPRKNKQFIADSGMISLPFTLDYFSLF
LLPAADAGVLACSKDNFCMRGLSNFYPDLTKRIRTSYQSLTELNDSPVPLELERCKSPTS
GLATRTPEAAPGFYRNEIPAVRQRNQVHHLPVKGSRKLSLPTDLKADLDHVNGHCTSPTS
QSCGSGKRLSSADVSKVNRWGPGRPPFRKAQSAACMEISLPVTAEESRENSYNRSRSSSI
SSIDKDSKEAITALYFMESFARKNDSTISPCLFVGTSLGMVLIISLNLPSTDEQRFTEPV
MVLPSGTFLSLKGAVLTFSCMDRTGGLMQPPYEVWRDPNNIDENEKSWRRKLVMNFPSPS
QEIGDHQYTIICSEKQAKVFSLPSQTCLYVHNITETSFILQANVVVMCNSACLACFCANG
HIMIMSLPSLRPMLDVNYLPLTDMRIARTFCFTNEGQALYLVSPTEIQRLTYSQEMCDNL
QDMLGDLFTPIETPEAQNRGFLKGLFGGSGQTFDREELFGEASAGKASRSLAQHIPGPGS
IEGMKGAAGGVMGELTRARIALDERGQRLGELEEKTAGMMTSAEAFSKHAHELMLKYKDK
KWYQF
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaatttccgaaaagttttggatggcttaactgcctcctcccctggcagt
ggtagcagcagtggcagtaacagtggtggtggagctggaagtggttcggtgcatccagga
gggactgcaggggttctcagagaggagattcaggaaaccctgacttcagactatttccag
atatgtaagacagttcggcatggttttccttatcagcctacagcattagcctttgatcca
gttcagaaaatcttggctattgggacaagaacaggtgctataagaatacttgggagacct
ggtgttgattgttattgtcaacatgaaagtggtgcagctgttctgcagcttcaattcttg
atcaatgagggtgctttggtcagtgcgagttcagatgatacacttcatttgtggaacctt
agacagaaaaggccagctattcttcattctcttaaatttaacagagaacgaattacttac
tgtcatctacctttccagagtaaatggctctatgttggaacagaaagaggaaatacacat
attgtaaatattgagtctttcattctttctggatatgttatcatgtggaacaaggcaatt
gaactatccacaaagactcatccaggtccagttgtacacttaagtgacagcccaagagat
gaagggaaactgctgataggttatgaaaatggtactgtagtattctgggacttgaaatct
aaaagagcagaactgagagtttattatgatgaggctattcattcaattgattggcatcac
gagggcagacagttcatgtgcagccattcagatggtagcttgactttatggaacctgaaa
agtccaagtcgtcctttccagaccacaattccacatggaaaaagtcaaagagaaggaaga
aaacctgaatcttgcaaaccaattcttaaagtagaatataaaacctgtagaaacagtgaa
ccattcataatattttctggtggactgtcctatgacaaagcttgcagaagaccaagttta
accatcatgcatggaaaggcaattacagtgcttgaaatggatcatcctattgttgaattt
ctaactttatgtgaaacaccctatccaaatgaatttcaagaaccctatgccgttgcagta
cttctggagaaagatctcattgtagttgatctgacacaaagcaactttccaatctttgaa
aatccatatcccatggatattcatgaatcaccagttacatgcacagcatacttcgctgat
tgcccaccagatttgattctagtgctctactccataggagtcaagcataaaaaacaagga
tacagtaataaggagtggccaataagtggaggagcttggaaccttggcacacaaacatat
ccagaaattattattactggtcatgcagatggatcaataaagttttgggatgcttctgca
ataactcttcagatgctgtacaagctaaaaacgtcaaaagtgtttgaaaaacagaaggta
ggagaaggaaagcaaacatgtgaaattgtagaggaagatccgtatgccgttcagatgatg
tactggtgtccagagagcagaatattctgtgtatcaggagtctctgcatatgtcataatt
tataaattcagcagacatgaaattacaacagaaatagtgtcattagaggtacgacttcag
tatgatattgaagacattatcaccccagaaccagaaacaagtcctccatttccagatctc
tcatcccagcttccttcttcaaggagtctttctgggagcactaacactgtatctagtgaa
ggagtaacaaaggacagtatcccatgcctcaatgttaagactcgaccagtacggatgcct
ccaggatatcaagcagaacttgttattcagttggtatgggtggatggtgaacctcctcag
cagattactagccttgccataagctcagcatatggaatagttgcatttgggaactgcaat
gggttggctgtggtggattttatacagaagacagtactgttaagcatggggaccattgac
ctatatagatcaagtgacctatatcaacgacaaccacggtctcctcgaaaaaacaagcag
ttcattgcagattctggtatgatatcacttcctttcactttagactatttttctctcttt
cttctgcctgctgctgatgctggtgttctggcatgttccaaagacaacttttgcatgcgt
ggcctgtctaacttttatcctgatttaacgaaacggatccgtacttcctatcagagttta
actgagctgaatgacagtccagttcccctggaacttgagcgctgcaagtctcccacttca
ggacttgctaccagaactcctgaggcagcaccaggcttttataggaatgaaataccagct
gtgagacagaggaatcaagtacatcacttgccagttaaaggatcaagaaagttaagtctg
ccaacagatcttaaggctgatcttgatcatgtaaatggacactgcacaagtccaacttct
cagagttgcggttctggaaaacgtctatctagtgctgatgtgtcaaaagtaaatcgctgg
ggtcctggaagaccaccctttcgaaaagcccagtcagcagcttgcatggaaatatcttta
ccagttacagcagaagaaagtcgagaaaattcctataatcgttctagaagctccagcatc
tccagtattgacaaagattctaaagaagcaattaccgcactatacttcatggagtccttt
gctcggaagaatgactctactatctccccttgtttgtttgttggaactagtctaggaatg
gtattaatcatctccttaaacctaccttcaacagatgaacaaagatttacagaaccagtc
atggtattgccaagtggtacattcctctcattaaaaggagctgtcctaacattctcctgt
atggaccgaactggcggattaatgcaacctccatacgaagtttggagggatccaaacaac
atagatgaaaatgagaaatcttggagaaggaaactggtcatgaacttcccctctccatcc
caagaaataggagatcatcagtatacaataatctgctcagaaaaacaagccaaagtcttc
tcactgccgtctcagacttgcctctatgttcataacattaccgagacatcttttatactg
caagccaacgtggtggtcatgtgtaacagtgcctgcttggcatgcttttgtgccaatggg
catatcatgataatgagcctacctagtcttcgcccaatgttggatgtgaattatttgcca
ctgacagacatgaggatagcacggacattctgtttcaccaacgaaggacaggctttatac
cttgtctctcctactgaaattcagcggttaacatatagtcaagagatgtgtgataaccta
caggacatgctaggagatttgtttactcccatagagacaccagaagctcaaaacagaggc
tttctcaagggactgtttggtggaagtggacaaacatttgacagagaagagctctttgga
gaagcgtcagcaggaaaagcatcacgcagcctcgcacagcacattcctggaccaggaagt
atagaagggatgaaaggtgctgctggaggggtgatgggagagctgactcgtgcacggatc
gcccttgacgagaggggacagaggctaggagagctggaagagaaaactgcaggcatgatg
accagtgcagaagcattttccaaacatgcgcatgagttaatgctgaaatataaggataag
aaatggtaccaattctaa
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integrated database retrieval system
