Sus scrofa (pig): 100620898
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Entry
100620898 CDS
T01009
Symbol
CACNA2D4
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04010
MAPK signaling pathway
ssc04260
Cardiac muscle contraction
ssc04261
Adrenergic signaling in cardiomyocytes
ssc04921
Oxytocin signaling pathway
ssc05410
Hypertrophic cardiomyopathy
ssc05412
Arrhythmogenic right ventricular cardiomyopathy
ssc05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100620898 (CACNA2D4)
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
100620898 (CACNA2D4)
09153 Circulatory system
04260 Cardiac muscle contraction
100620898 (CACNA2D4)
04261 Adrenergic signaling in cardiomyocytes
100620898 (CACNA2D4)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100620898 (CACNA2D4)
05412 Arrhythmogenic right ventricular cardiomyopathy
100620898 (CACNA2D4)
05414 Dilated cardiomyopathy
100620898 (CACNA2D4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100620898 (CACNA2D4)
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100620898 (CACNA2D4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
CobT_C
Motif
Other DBs
NCBI-GeneID:
100620898
NCBI-ProteinID:
XP_020948159
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All DBs
Position
5:complement(68805092..68899397)
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AA seq
992 aa
AA seq
DB search
MSLVEAAEEADLNHEFNESLVFDYYNSVLINEKDESGAYVELGAEFVLEANAHFSNLMVN
TTLSSVQLPTNVYNKDPDILNGIYMSEALNSVFVENFQRDPTLTWQYFGSSTGFFRIYPG
IKWTPDENGVITFDCRNRGWYIQAATSPKDIVILVDTSGSMKGLRMTIAKHTVSTILDTL
GENDFVNIIAYNDYIHYIEPCFKGILVQADRDNREHFKQLVDELMVKGVGVVDRALSEAF
QILQQFQEVRRGSLCNQAIMLITDGAVEDYEPVFQKYNWPDRKVRVFTYLIGREVSFADR
LKWIACNNKGYYTQISTLADAQENVMEYLHVLSRPMVINHDHDVTWTEAYMDSKAQSLTL
LTTVAMPVFSKKNETRSHGILLGVVGSDVALRELMKLAPRYKLGVHGYAFLNTNNGYILS
HPDLRPLYWEGKKLKPKPNYNSVDLSEVEWEDQAGTLRTAMINRETGSLSMDVKVPLDRG
KRVLFLTNDYFFTDISDTPFSLGVVLSRGHGEYILLGNTSVEEGLHDLLHPDLSLAGDWI
YCLTDIDPDHRKLSQLEAVVRFLKGQDPALECDEELLQEVLFDAVVTAPMEAYWTALALN
ISDESERVVDMAFLGTRAGLLRSSLFVGSEKVSDKQFLTPADDASMFTLDHFPLWYRQAA
EQPPGNMVFNLRSVEGQESPGEPEVVTVSTAVAVTVDERTAIAAAVGVQMRVEFLQRTFW
SATRQCGAAEGPCLESCQDSDLDCFVIDGNGFILISERAQEMGRFLGEVDGALVTQLLGM
GVFSQVTMYDYQAMCKPPTHHPSASRPLASPISALLTAARWLVNELMLLLLEWSAWGSWH
ADNRAEAKTVFHHSHKHKKQDVLQPCDTAYPVFVHQTAVQEANGIIECGACQKTFVMQQI
PKSNLLLLVTDPTCDCSIFPPVLQEAMEVKYNASVKCDRMRSQKLRRRPDTCHAFHPEEN
AQDCGGTSDTSASHPLLLLPLCAWVLPPRLLQ
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggtagaagctgccgaggaggccgacctgaaccacgaattcaacgagtctctg
gtgtttgactattacaactccgtcctcatcaacgagaaagacgagagcggcgcatatgtg
gagctgggggctgagtttgtcctcgaggccaatgctcactttagcaacttgatggtgaac
acgaccctgagcagcgtgcagctgcccaccaacgtctacaacaaagacccagatattttg
aatggaatctacatgtctgaagccttgaactctgtttttgtggagaactttcagagagat
cccacgctgacttggcagtactttggcagctcaactggattcttccgcatctatccaggc
atcaagtggacgcctgacgagaatggagtcattacctttgactgcagaaaccgcggttgg
tacatacaagccgccacctcccccaaggacatagtgattttggtggacacgagcggcagc
atgaaggggctgaggatgaccatcgccaagcacactgtctccaccattctggacacgctg
ggagagaacgactttgtgaacatcatcgcgtacaacgactacatccactacattgagcct
tgtttcaaagggatcctggtccaggcagatcgggacaaccgtgagcacttcaagcagctg
gtggacgagctgatggtcaagggcgtgggggttgtggaccgagctctcagtgaagccttc
cagatcctgcagcagttccaagaggtcaggcgtgggagcctgtgcaaccaggccatcatg
ctgatcaccgacggggccgtggaggactatgagccggtgttccagaaatacaattggccc
gaccgcaaggtccgggtcttcacttatctgatcgggagggaagtgagttttgctgaccgc
ctgaagtggattgcgtgcaacaacaaaggctactacacgcaaatctccacgctggcagat
gcccaggagaacgtgatggagtacctgcatgtgctgagccggcccatggtcatcaaccat
gaccatgacgtcacctggacggaagcctacatggacagcaaggcacagagcctgacgctc
ctcaccacggtagccatgcctgtcttcagcaagaaaaacgagacgcgatcccacggcatc
ctcctgggtgtggtgggctccgatgtggccctgagggagttgatgaagctggcaccccgg
tacaagctcggtgtgcacggatatgcctttctgaacacgaacaatggctacatcctctca
catcctgacctccgacccctgtactgggaggggaagaaactgaagcccaaacccaactac
aacagtgtggacctctcggaagtggaatgggaagaccaggccggaactctgagaacagcc
atgatcaacagggagacagggtctctctccatggacgtgaaggtcccgctggacagaggg
aagcgagttcttttcctgaccaatgactacttcttcacagacatcagtgacacgcctttc
agtttgggagtggtgctgtcccgtggccacggagaatacatcctcctgggtaacacgtct
gtggaagaaggcctgcatgacctgcttcacccggacctgagcctggccggtgattggatc
tactgcctcacggacattgaccctgaccaccggaagctcagccagctggaggctgtggtc
cgcttcctgaaggggcaagacccagcactggagtgtgatgaggaactgctgcaggaggtg
ctgttcgatgcggtggtgacggcccccatggaagcgtactggacggcgctggccctcaac
atctctgacgagtctgagcgtgtagtggacatggccttcctgggcacccgtgccggcctc
ctcagaagcagcctattcgtgggctccgagaaagtctctgacaagcagttcctgactcct
gcagatgacgccagcatgttcaccctggaccacttccctctgtggtaccgccaggccgcc
gagcagcctccaggcaacatggtcttcaacctccgctcggtggaaggacaagaaagtccg
ggcgagcctgaggtagtgacagtgagcacagctgttgccgtgaccgtggacgagaggaca
gcaatcgctgcagcggtgggcgtccagatgagggtggagttcctgcagcgcacattctgg
tcggccacacggcagtgcggtgctgccgaggggccgtgcttggagagctgccaggacagc
gacctggactgcttcgtcattgacggcaatgggtttatcctgatctcggagagggcccag
gagatgggaagattcctaggggaggtggacggtgccctcgtgacccagctgctcggcatg
ggagtgttcagccaagtgaccatgtacgactaccaggccatgtgcaagccccccactcac
caccccagcgcctcccggcccctggccagtcccatctctgccctcctgacggctgccagg
tggctggtgaacgagctcatgctgctcctgctggagtggagcgcctggggctcttggcat
gcggacaacagggcggaggccaagaccgtcttccatcactcccacaagcacaagaagcag
gatgtgctgcagccctgcgacaccgcataccccgtgttcgtgcaccagacagctgtccag
gaggccaacggcatcatcgagtgtggagcctgccagaagacatttgtgatgcaacagatt
cccaagagcaaccttctcctgctggtgacagaccccacctgtgactgcagcatcttccca
ccagtccttcaagaggccatggaggtcaaatataacgcctctgtcaagtgtgacaggatg
cgctcccagaagctgcgccggcgaccagacacctgccatgccttccatccagaggagaac
gcccaggactgtggtggcacctcggacacctcagcctcacaccccctgctcctgctacct
ctgtgtgcctgggtgctgccaccccggctgctgcagtga
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