Sus scrofa (pig): 100620900
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Entry
100620900 CDS
T01009
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor 1-alpha, somatic form-like
KO
K03231
elongation factor 1-alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03013
Nucleocytoplasmic transport
ssc05134
Legionellosis
ssc05140
Leishmaniasis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100620900
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
100620900
09174 Infectious disease: parasitic
05140 Leishmaniasis
100620900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100620900
03016 Transfer RNA biogenesis [BR:
ssc03016
]
100620900
03012 Translation factors [BR:
ssc03012
]
100620900
04131 Membrane trafficking [BR:
ssc04131
]
100620900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
100620900
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100620900
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100620900
Translation factors [BR:
ssc03012
]
Eukaryotic type
Elongation factors
100620900
Membrane trafficking [BR:
ssc04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
100620900
Exosome [BR:
ssc04147
]
Exosomal proteins
Proteins found in most exosomes
100620900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
100620900
NCBI-ProteinID:
XP_005656114
LinkDB
All DBs
Position
6:81508564..81519275
Genome browser
AA seq
507 aa
AA seq
DB search
METWGCKGRAWDVDCKRGWGQTPSCLVLGVKRCSAGAPPNSRAAPGMGKEKTHINIVVIG
HVDSGKSTTTGHLIYRCGGIDKRTIERFEKEASEMGKGSFKYAWVLDKLKAERERGITID
ISLWKFETKKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVASGVGEFESGISKNGQTR
EHALLAYTLGVKQLIVAVNKMDITEPPYCSTRFEEISREVKTYIKKIGYDADTVPFVPIS
GWLGDNVIEPSAKMPWFRSWKITRKEGNVVGTTLLEALDSIVPPTRPTDKPLRLPLQDVY
KIGGIGTVPVGRVETGILKPGMVVTFAPCNITTEVKSVEMHHEALAEALPGDNVGFNVKN
VSIKDIRRGNVTGDSKNDPPLEVGSFLAQVIILNHPGSIAAGYSPVLDCHTAHIACKFAE
LREKLDKRSGKKLEDNPXSLRSGDAGLVQMIPSKPMCVESFSEYPPLGRFAARDMRQTVA
VGVIKAVEKKAATGGRVTKAAMKAAKK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggagacgtggggatgcaaggggcgggcctgggatgtggactgtaaaagggggtggggc
cagacacccagttgcctggttctaggtgtcaagaggtgcagtgcaggggctcctcccaac
tcaagagcagctccaggcatgggcaaagagaagacccacatcaatattgtggtcatcggc
catgtggactcgggcaagtccaccaccacggggcatctcatctacaggtgcgggggcatc
gacaagaggaccattgaaaggttcgagaaggaggcctcggagatgggcaaaggctccttc
aagtacgcctgggtgctggacaagctgaaggctgagcgggaacgcggcatcaccattgac
atctcgctctggaagtttgagaccaagaaatactacatcaccatcatcgatgccccaggt
caccgcgacttcatcaagaacatgatcacaggcacctcgcaggcggactgcgctgtgctg
attgtggcaagtggtgtaggtgagtttgagtctggcatctccaagaacgggcagacccgt
gagcatgcactgctggcctacacgctgggcgtgaagcagctcatcgtggcggtcaacaag
atggacatcacggagcctccttactgtagcacacgctttgaggagatcagcagggaggtg
aagacctatatcaagaagatcggttacgacgctgacactgtccccttcgtgcccatctca
ggctggcttggggacaacgtgatagagcccagcgccaagatgccctggttcagaagctgg
aagattaccaggaaggaggggaacgtggtaggcacaacgctactggaagccctggactcc
atcgtgccccccacccgccctacagacaagcccctgcggctgcccctgcaggatgtgtac
aagattgggggtattggcaccgtgcctgtgggccgggtggaaactggcatcctcaagccg
ggcatggtggtgacctttgccccctgcaacatcaccactgaggtcaagtctgtggagatg
caccacgaggccctggccgaggccctgcctggtgacaatgtgggcttcaatgtgaagaac
gtgtccataaaggacatcaggcggggcaacgtgacaggggacagcaagaatgaccctccc
ttagaggtggggagcttccttgcccaggtgatcatcctcaaccatcctggcagcattgca
gctggctactcaccagttctggactgccacactgcccacattgcctgcaagtttgcagag
ctgagggagaagcttgacaagcgctcaggcaagaagctggaagacaatcccnagagcctg
aggtctggggatgctggcctcgtccagatgattccgagcaagcccatgtgtgtggaaagc
ttctctgagtatcctcctcttggtcgctttgccgcacgggacatgaggcagactgtggct
gtcggggtcatcaaagccgtggagaaaaaagcagctactggaggcagagtcaccaaggcc
gccatgaaagctgccaagaagtga
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