Sus scrofa (pig): 100620959
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Entry
100620959 CDS
T01009
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03030
DNA replication
ssc03410
Base excision repair
ssc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100620959 (POLE)
03410 Base excision repair
100620959 (POLE)
03420 Nucleotide excision repair
100620959 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssc03032
]
100620959 (POLE)
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100620959 (POLE)
Enzymes [BR:
ssc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100620959 (POLE)
DNA replication proteins [BR:
ssc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
100620959 (POLE)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
100620959 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
GARP
Motif
Other DBs
NCBI-GeneID:
100620959
NCBI-ProteinID:
XP_020929603
UniProt:
A0A8D0NY09
LinkDB
All DBs
Position
14:22798146..22852818
Genome browser
AA seq
2283 aa
AA seq
DB search
MVLRNTGRRRAEPGPEGEPSRDDGPSSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKT
GWLINMHPTEILDEDKRLISAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFL
SKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEISPAVKKNREQ
GHASDAYTAMLSSVLQGGSVVMDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRYRGNAFPVEIARRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMV
TYNGDFFDWPFVEARAAVHGLSMYQEIGFQKDSQGEYKSSQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMHHAIEEEEKVPMDQVTNFQEVC
DQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLTPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHVTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEAGDAAEVKRCRNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTSVKKPKVTISYPGAMLNIM
VKEGFTNHQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGNTLEEVYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFVLEGKRQVGVAQA
SEGAPSCSTPDMEDLGLSRPLHSGVPVATKRRRILWESQEESQDLELMVPWQEILGQPPA
LGTTQEEWLVWLRFHKKKWQLQARQRLAHRKRRRLEVAEGVPRPGAIREGPSTGLGGFFR
RTARSILDLPWQIVQISETSQAGLFRLWAVISSDLYCIKLNIPRVFYVNQRVAKVEESPS
YRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINTELAAPDIEGVYETQVPLLFRALVQ
LGCVCVVNKHLVRHLSGWEAETFALEHLEMRSLAQFNYLEPGSIRHIYLYHHMQGHKALF
GIFVPSQRKASVFVLDTVRSNQMPSLSALYSAEHSLLLEKVGPELLPPSKHTFEVRAETD
LKIICRAIQRFLLAYKEERRGPTLIAIQSNWEMKRLVSEVPVLEEFPLVPIHVADKISYG
VLDWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFARHLQRH
NHLLWLSPTSRPDLGGKEADDNRLVMEFDDQAPVEINSSGCYSTVCVELDIQNLAVNTIL
QSHHVNDMEGADSMGVSFDVIQQASLEDMITGNQAASAPASYDETALCSSTFRILKSMVV
GWVKEITQYRNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHGMMKKLFLQLIAEFKRLG
SSVVYANFNRIILCTKKRRVEDALAYVEYITNSIHSKEIFHSLTISFSRCWELLLWMDPS
NYGGIKGNVPSRIHCGQDSPKEGRVEEEEAEEEEEEEEEEEGGSKELDVEDLLENNWNIL
QFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSTPGSTPVRRRGASQLSQEAQGEAGA
LPGMITFSQDYVANELTQNFFTITQKIKKKVTGSRNSTEPSEMFPVLPGSHLLLNNPALE
FIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVICRSCNF
CRDLDLCKEPSFSQDGAVLPQWLCSNCQVAYDSSVIEMALVEALQKKLMAFTLQDLVCVK
CRGVKETNMAVYCSCAGGFALTIHTKVFMEQIGIFQNIAQHYGMSYLTETLEWLLQQNPQ
LGH
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaggaacaccgggcggcggcgcgcggagcccggcccggagggcgaacccagc
cgggatgatggcccctcttcctcagtctctgcgctcaagcgcctggagcgcagtcagtgg
acggataagatggatctgcggtttgggtttgagagactcaaggagcctggtgagaagaca
ggctggctcatcaatatgcaccccactgagattttagatgaagataaacgcttaattagt
gcagtggattactactttattcaagatgatggcagcagatttaaggtggccttgccctac
aaaccatatttttacattgccaccagaaagggttgtgaacgagaagtttcatctttcctc
tctaagaagtttcagggtaaaattgctaaagtagagactgtccctaaagaggatctggac
ttgccaaatcacttggtgggtttgaagcgaaattacattaagctgtccttcaacactgtg
gaggaccttgtcaaagtgagaaaggagatctccccagctgtgaagaaaaaccgggagcag
ggccacgccagcgatgcctacacggccatgctctccagtgttctccaaggaggcagtgtg
gtcatggatgaagaggaaacctctaagaagattgctgaccagctggacaacattgtggat
atgcgggagtatgatgtgccctaccacatccgcctctccatcgacctaaagatccacgtg
gctcattggtacaatgtccgataccgaggaaatgcctttccagtggaaattgcccgccga
gatgacctggttgaacgacctgaccctgtggttttagcgtttgacattgagacaaccaaa
cttcccctcaagtttcctgatgctgagactgaccagattatgatgatttcctatatgatt
gatggtcagggctacctcatcaccaacagggagatcgtctcagaagatatagaagatttt
gagttcacccccaagccagaatatgaagggcccttctgtgtcttcaatgaacctgatgag
gttcatctaatccaaagatggtttgagcatgtccaagagaccaagcccaccatcatggtc
acctataatggagacttttttgactggccatttgtggaggccagagctgcggtccatggt
ctgagcatgtaccaggagatagggttccagaaggacagccagggggagtacaagtcatcc
cagtgcatccacatggactgtttgaggtgggtgaaaagggacagttaccttcctgtgggc
agccacaacctcaaggcggctgctaaagccaagctgggctatgaccctgtggagctggac
cccgaggacatgtgccggatggccaccgaacagccccagactctggccacctactcagtg
tcagacgcggtagccacctactacctgtacatgaagtacgtccacccatttatattcgcc
ctgtgcaccattatccccatggagcctgacgaggtgctgcggaagggctccgggacgctg
tgtgaggccctgctgatggtgcaggccttccatgccaacatcatcttccccaacaagcag
gagcaggagttcaacaagctaacagatgatggccacgtgctggacgccgagacctacgta
gggggacacgtggaagctcttgagtcgggcgtgttccgcagcgacatcccctgccggttc
aggatgaatcctgctgcctttgacttcctgctgcagcgggtggagaagaccatgcatcat
gccatcgaggaagaggagaaggtacccatggatcaggtcaccaactttcaagaggtgtgt
gatcagattaagaccaagctcacctccttgaaagatgttcctaaccgaattgagtgtcct
ctgatctaccacctggacgtgggtgccatgtaccccaacatcatcttgacaaaccgcctg
cagccctctgccatggtggacgaggccacctgcgctgcctgcgacttcaacaagcctgga
gcaaactgccagcggaagatggcctggcagtggaggggcgagttcatgccggccagtcgc
agcgagtatcataggatccagcaccagttggagtcagagaagttccctcccttgacccca
gagggcccagcccgggcctttcatgagctgtcccgtgaggagcaggctaaatatgagaag
aggaggctggcagattattgccggaaggcatacaagaagatccacgtgaccaaggtggaa
gagcgtctcactaccatctgccagcgggagaactctttctacgtggacacagtgcgtgcc
ttccgggacaggcgctacgagttcaaaggtctccacaaggtgtggaagaagaagctctct
gcagctgtggaggcaggggacgcggcggaggtgaagcgctgcaggaacatggaggtcctg
tacgactccctgcagctggcgcacaagtgcatcctcaactccttctatggctacgtcatg
cgcaagggggcccgctggtactccatggagatggccggcatcgtctgcttcacgggggcc
aacattatcacccaggcgagggaactgattgagcagatcgggagacccttagagctggac
acagatggaatatggtgcgtcctgccaaatagcttccctgaaaattttgtcatcaagacg
accagtgtgaaaaagcccaaagtgaccatctcctaccccggggctatgttaaacatcatg
gtcaaggaaggcttcaccaaccatcagtaccaggagctggctgagccttcctctctcacc
tacgtcacccgctcagagaacagcatcttttttgaggttgacggaccctaccttgccatg
atcctgccagcctccaaggaagaaggcaagaaactgaagaagaggtatgccgtattcaac
gaggatgggtccctggccgagctcaagggattcgaggtcaaacgccgaggggagctgcag
ctgattaaaatcttccagtcctcggtgttcgaggcctttctcaaaggcaacacactggaa
gaggtatatggctctgtggccaaggtggctgattactggctggacgtgctgtacagcaag
gcagctaacatgcctgattctgagctgttcgagctgatctctgagaaccgttccatgtct
cggaagctggaagattacggggagcaaaagtctacgtccatcagcacggccaaacgcctg
gcggagttcctgggggatcagatggtgaaggatgcagggctgagctgccgctacattatc
tcccggaagcccgaggggtctccagtcacagagagggccattccactcgccattttccag
gcagagcccacggtgaggaagcactttctccggaaatggcttaagagttcttcccttcaa
gactttgatattcggacaatcctggactgggactactacatcgagcggctggggagcgcc
atccagaagatcatcacaatccctgcggctctgcagcaggtgaagaacccagtaccacgt
gtcaaacaccctgactggctgcacaaaaaactgctggagaagaatgatgtctacaagcaa
aagaagatcagtgagctcttcgtcctggagggcaagagacaggtaggcgtggcccaggct
tcggaaggggccccgagctgcagcactcccgacatggaggacctgggcctctcaaggccg
ctccactcaggggttcctgttgccaccaagaggaggcgcatcctctgggagagccaggag
gagtcgcaggacctggagctgatggtgccctggcaggagatcttggggcagcctccagca
ctcgggaccacccaggaagagtggttggtatggctccgatttcacaagaagaaatggcag
ctgcaggctcgacagcgccttgctcacaggaagaggcggcgtctggaggtggcagagggt
gtgccacggcctggggccatccgagagggaccctctacagggctagggggctttttccga
agaactgctcgcagcattctggacctcccatggcagatcgtgcagatcagtgagaccagc
caggctggcttgttcagactgtgggctgtcatcagcagtgacctgtattgcatcaagctg
aacattccccgggtcttctacgtgaaccagcgggtggccaaggtggaggagagcccttct
tatcggaaggtgaaccgggtcctgcctcgctccaacatggtctataacctctacgagtac
tcggtgccagaggacatgtaccaagaacatatcaatgagatcaacactgagctggcggca
ccagacattgaaggcgtgtacgagacccaggtcccattattattccgggccctggtgcag
ctgggctgtgtgtgtgtggtcaataagcatctggtgaggcacctttcaggctgggaagca
gaaaccttcgccctggagcacctggagatgcgctctctggcccagttcaactacctggaa
ccagggagcatccgccacatctacctgtatcatcacatgcagggccacaaggctctcttc
ggcatctttgtgccctcacagcgcaaagcctctgtgtttgtgttggataccgtgcgaagc
aaccagatgcccagcctcagcgccttgtactccgctgagcacagcctcctgctggagaaa
gtgggccccgagctcctgcccccctccaaacacacgtttgaagttcgggctgaaaccgac
ctaaagatcatctgcagagccatccagcgcttcctgctggcgtacaaggaggagcgccgg
gggcccacactcattgccattcagtccaactgggagatgaagaggctagttagtgaagtt
cccgtcttggaggagttcccgctagtgcctatccatgtagctgataagatcagctacggg
gtcctggactggcagcgccatggagcccggcgcatgatccggcattacctcaacctggac
acttgtctgtcacaggccttcgagatgagcaggtacttccacatccccgttgggaatctg
cctgaggacatatctaccttcggctccgatctcttctttgctcgccacctccagcgccac
aaccatctgctctggctgtcgcccacctctcgccctgacctgggtgggaaggaggccgac
gacaaccggctcgtcatggagttcgatgaccaggcccctgtggagatcaacagttcaggc
tgttactccacagtgtgcgtggagctggacattcagaacctggccgtcaacaccatcctg
cagtctcaccacgtcaatgacatggagggggctgacagcatgggcgtcagcttcgacgtg
atccagcaggcctccctggaggacatgatcacgggcaatcaggctgccagtgcccccgcc
agctacgacgagacggccctctgctctagcaccttcaggatcctgaagagcatggtggtg
ggctgggtgaaggagatcacacagtaccgcaatgtctacgccgacaaccaggtgatgcac
ttctaccgctggctgcggtctccgtcctcactgctgcacgaccctgccctgcaccgcaca
ctccatggcatgatgaagaagctcttccttcagctcatcgctgagttcaagcgcctgggg
tcatcggttgtctatgccaacttcaaccgcatcatcctctgcaccaagaaacggcgagtg
gaagacgcccttgcctacgtggagtacatcaccaacagcatccattctaaggagatcttc
cattctttgacaatttctttctctcgatgctgggaactccttctctggatggatccatct
aactatggtggcatcaaaggaaatgtcccctctcgtattcactgtggacaggactcccct
aaagagggcagagtggaggaggaggaagctgaggaggaggaggaggaggaggaggaggag
gagggaggctctaaggagctagatgtggaggatttgctggaaaacaactggaacatcttg
cagtttctgccgcaggcagcctcctgccaaagctacttcctcatgattgtctcagcctac
atcgtggccgtgtaccacagcatgaaggaggagctgaggcgcagcaccccagggagcacc
cctgtgcggaggaggggggccagccagctctcccaggaggcccagggggaagctggagcc
cttcccggtatgatcaccttctcacaggattacgtggcgaatgaactcacgcagaacttc
ttcaccatcacacagaagattaagaagaaagtcacgggctctcggaactccactgagccc
tcagaaatgtttcctgtcctccctggttctcacctgctgctcaataaccctgctctggag
ttcatcaaatacgtgtgcaaggtcctgtctttggacacgaacatcacaaaccaggtgaac
aagctaaacagagacctgctccgcctggtagatgttggtgagttctcagaggaggcccag
ttccgagacccctgccgctcctacgtgctccctgaggtcatctgccgcagctgtaacttc
tgccgggatctggacctgtgcaaggagccctccttctctcaggatggggctgtgctgcct
cagtggctctgctccaactgtcaggttgcctacgactcgtcagtcatcgagatggccctg
gtggaggccctgcagaagaagctgatggccttcaccctgcaggacctggtctgtgtgaag
tgccggggagtgaaggagaccaacatggctgtgtattgcagctgtgctgggggcttcgcg
cttaccatccacactaaggtattcatggagcagattggaatcttccagaacattgcccag
cactatggcatgtcgtacctcacggagaccctagagtggctgctgcagcagaacccccag
ctgggtcattag
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integrated database retrieval system
