Sus scrofa (pig): 100621034
Help
Entry
100621034 CDS
T01009
Symbol
PARP1
Name
(RefSeq) LOW QUALITY PROTEIN: poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03410
Base excision repair
ssc04064
NF-kappa B signaling pathway
ssc04210
Apoptosis
ssc04217
Necroptosis
ssc05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100621034 (PARP1)
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100621034 (PARP1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100621034 (PARP1)
04217 Necroptosis
100621034 (PARP1)
09160 Human Diseases
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
100621034 (PARP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssc03032
]
100621034 (PARP1)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100621034 (PARP1)
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100621034 (PARP1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
100621034 (PARP1)
DNA replication proteins [BR:
ssc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100621034 (PARP1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100621034 (PARP1)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100621034 (PARP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ESF1
Motif
Other DBs
NCBI-GeneID:
100621034
NCBI-ProteinID:
XP_003357689
Ensembl:
ENSSSCG00000023660
LinkDB
All DBs
Position
10:complement(14203157..14241164)
Genome browser
AA seq
1018 aa
AA seq
DB search
MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKV
GHAIRHPDIEVDGFSELRWDDQQKVKKTAEAGGVTGKGQDGVGSKAEKTLGDFAAEYAKS
NRSTCKGCMEKIEKGHVRLSKKMLDPEKPQLGMIDRWYHPNCFVQNREELGFRPEYSASQ
LKGFSLLTAEDKEALKKQLPGIKSEGKRKGDEVDGVDGVAKKKSKKEKDKESKLEKALKA
QNDLIWNIKDELKKVCSTNDLKELLIFNKQQVPSGESAILDRVADGMVFGALLPCEECSG
QLVFKSDAYYCTGDVTAWTKCMVKTQTPNRKEWVTPKEFREITYLKKLKIKKQDRIFPPE
ASTPVATAPPPPAASAPTAVNSSAPPDKPLSNMKILTLGKLSRNKDEVKAAIEKLGGKLT
GTASKASLCVSTKKEVDKMSKKMEEVKEANVRVVSEDFLQDVSASTKSLQELLCTHILSP
WGAEMKAEVKAEPVEAVAPRGKSGGALPKKSKGPIREEGANKSEKRMKLTLKGGAAVDPD
SGLEHSAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKESRYWIFRSWGRVGTVI
GSNKLEQMPSKEDAIDHXMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDYGQDEEAVKKLT
VNPGTKSKLPKSVQELIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYAILSEV
QQAVSQGSSDSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLDNLLDIEVAYS
LLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAETIRKYVKNTHATTHNAYDLEVIDI
FKIEREGESQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIY
FADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTP
DPAASITMDGVEVPLGTGIPSGVNDTCLLYNEYIVYDIAQVNLKYLLKLKFNFKTSLW
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcatcggacaagctctatcgggtcgagtatgctaagagtgggcgcgcctcc
tgcaagaaatgcagcgagagcatccccaaggactcgctccggatggccatcatggtgcag
tcgcccatgttcgatgggaaagtcccgcactggtaccacttctcctgcttctggaaggtc
ggccacgccatccggcaccctgacatcgaggtggacgggttctccgagctccggtgggac
gaccagcagaaagtcaagaagacggcggaggctggaggagtgacaggcaaaggccaagat
ggggttggcagcaaggcggagaagacgctgggtgacttcgcggccgagtatgccaagtcc
aacagaagcacgtgcaagggctgcatggagaagatcgagaagggccacgtgcgcctgtcc
aagaagatgctggaccccgagaagccccagctgggcatgatcgaccgctggtaccaccca
aactgctttgttcagaaccgggaggagctgggcttccggcccgagtacagcgccagccag
cttaagggcttcagcctgctcaccgcagaggacaaagaagcgctgaagaagcagctcccg
ggcatcaagagtgaaggaaagagaaaaggtgacgaggtagatggagtggatggagtggcc
aagaagaaatctaaaaaagaaaaggacaaggagagtaagctcgaaaaggccctcaaggcc
cagaacgacctgatctggaatatcaaggacgagctaaagaaagtgtgttcaaccaatgac
ctgaaagagctgctcatcttcaacaagcagcaagtgccctccggggagtcggcgatcttg
gaccgagtggccgacggcatggtgttcggcgcccttcttccctgtgaggaatgctcaggc
cagctggtcttcaagagcgatgcctactactgtactggggacgtcactgcctggaccaag
tgcatggtcaagacacagacgcctaaccggaaggagtgggtgaccccaaaggaattccga
gaaatcacttacctcaagaaattgaagatcaaaaaacaggaccgtatattcccccccgag
gccagcacccctgtggccacagcacccccaccccccgcagcctctgcacccaccgccgtg
aactcctcggccccaccagacaagccgttatccaacatgaagatcctgactcttgggaaa
ctctcccggaacaaggatgaagtgaaggccgcgatcgagaaactcggggggaagttgaca
gggacggccagcaaggcctccctgtgcgtcagcaccaagaaggaggtggacaagatgagt
aagaagatggaggaagtgaaagaagcgaatgtccgagtggtgtccgaggatttcctccag
gacgtctcggcctcgaccaagagccttcaggagctgctctgcacccacatcctgtccccc
tggggggccgaaatgaaggctgaggtgaaggccgaacctgtggaagccgtggcccccaga
gggaagtcagggggtgcactccccaagaagagcaagggccccatcagggaggaaggtgcc
aacaaatctgaaaaaagaatgaaattaactcttaaaggaggagcagccgtggaccccgat
tctggtctggaacactcggcccatgtcctggagaaaggcgggaaggtcttcagtgccaca
ctcggcctggtggatattgtcaagggaaccaactcctattacaagctgcagctcctggag
gatgacaaggagagcaggtactggatattcaggtcctggggccgtgtgggcaccgtaatt
ggtagtaacaaactggagcagatgccatccaaggaggatgccattgatcatnttatgaaa
ttatatgaagagaaaactgggaatgcctggcactccaaaaacttcacaaagtatcccaag
aagttctaccctctggagattgactatggccaggatgaagaggcagtgaagaagctgaca
gtaaaccctggcaccaaatccaagctccccaaatcggtgcaggaactcatcaagatgatc
tttgatgtggaaagtatgaagaaagccatggtggagtacgagattgaccttcagaagatg
ccgttggggaagctgagcaaaaggcagatccaggccgcgtacgccatcctcagtgaggtc
cagcaggccgtgtcccagggcagcagcgactcccagatcctggatctctcaaatcgattc
tacaccttgatcccccatgactttgggatgaagaagcctccactgctgaacaatgcggac
agcgtgcaggccaaggtggaaatgctagacaacctattggacatcgaggtggcctacagt
ctgctcaggggtggttctgatgacagcagcaaggaccccattgatgtcaactatgagaag
ctcaaaactgatattaaggtggtggacagggattctgaagaagccgagaccatcaggaag
tacgttaagaacactcacgcaaccacacacaatgcatatgacttggaagttatcgatatc
tttaagatcgagcgtgaaggggagagtcagcgttacaagccatttaaacagctgcataac
cggaggttgctgtggcacgggtccaggaccaccaacttcgccgggatcttgtcccagggt
ctccggatagccccacctgaagcacctgtgacgggctacatgtttgggaaggggatctat
ttcgccgacatggtctccaagagtgccaactactgccacacgtcccagggagaccccata
ggcttgatcctgttgggagaagttgcccttggaaacatgtatgagctgaagcacgcttcg
cacatcagcaagttacccaagggcaagcacagtgtcaaaggcttaggcaaaacgacccct
gaccccgcagccagtattactatggatggtgtggaggttcctcttgggaccgggatccca
tctggtgtgaacgatacctgtctgctgtataacgagtacattgtctacgatatcgctcag
gtcaatctcaagtatctactgaagctgaaattcaactttaagacgtccctgtggtga
DBGET
integrated database retrieval system
