Sus scrofa (pig): 100621036
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Entry
100621036 CDS
T01009
Symbol
TFDP1
Name
(RefSeq) transcription factor Dp-1 isoform X1
KO
K04683
transcription factor Dp-1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03083
Polycomb repressive complex
ssc04110
Cell cycle
ssc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100621036 (TFDP1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100621036 (TFDP1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100621036 (TFDP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100621036 (TFDP1)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100621036 (TFDP1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
100621036 (TFDP1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100621036 (TFDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
alpha-hel2
FMP23
Motif
Other DBs
NCBI-GeneID:
100621036
NCBI-ProteinID:
XP_020921643
Ensembl:
ENSSSCG00000009560
LinkDB
All DBs
Position
11:78755472..78778312
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AA seq
418 aa
AA seq
DB search
MARLFTLSSLPPQAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNTIGKQLLPKTF
GQSSVNVTQQVVIGTPQRPAAPNTLVVGSPHTPNTHFVSQNQPSEPSPWSAGKRNRKGEK
NGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPSESAYDQKNIRRRVYD
ALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQI
AFKNLVQRNRQAEQQASRPPPPNSVIHLPFIIVNTSKRTVIDCSISNDKFEYLFNFDNTF
EIHDDIEVLKRMGMACGLESGSCSAEDLKVARSLVPKALEPYVTEMAQGPLGVFVTSAVS
TSNGTRLSASDLANGADGTLATSSSGSQYSGSRVETPVSYVGEDDEDEDDFNENEEED
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtctgtttactctgtcctcgttgcctccacaggccggtctaattgaagccaac
ggggaactcaaggtcttcatagaccagaacctcagtcccggcaaaggcgtggtgtccctg
gtcgccgtccacccctccacagtgaacacaatcgggaagcagctcttgccaaaaacgttc
ggacagtccagtgtcaacgtcactcagcaagtggtgattggcacgcctcagagacctgca
gcgcccaacactctcgtggtaggaagcccacacacccctaacactcactttgtgtcccag
aaccagccttcagagccctcaccttggtctgcagggaagcgtaacaggaagggggagaag
aacggcaagggtttgcggcacttttccatgaaggtctgcgagaaggtgcagcggaagggg
accacgtcctacaacgaggtggcggatgagctggtggcagaattcagcgctgccgacaac
cacatcttacccagtgagtcggcctacgaccagaagaacatacggcggcgcgtctacgat
gccttgaacgtgctcatggccatgaacatcatctccaaggagaagaaggagatcaagtgg
atcggcctgcccaccaactcggctcaggagtgtcagaacctcgaggtggagaggcagaga
agactggagagaataaagcagaagcagtcgcagctccaggagctcatcttgcagcaaatc
gccttcaagaacctggtgcagaggaaccgccaggcggagcagcaggccagccggccgccc
ccgcccaactccgtcatccacctgcccttcatcatcgtcaacaccagcaagaggaccgtc
atcgactgcagcatctccaacgacaagttcgagtacctgtttaactttgacaacacgttt
gagatccacgacgacatcgaggtgctgaagcgcatgggcatggcctgcgggctggagtcc
gggagctgctccgccgaggacctgaaggtggcgcggagcttggtaccaaaggcgctggag
ccctacgtgacagaaatggctcagggaccactcggtgtctttgtcacgtcagcagtttcg
acttcgaatggcacaaggctctctgccagcgacctggccaacggcgcggatgggacgctg
gccacgagctccagcgggtcacagtacagtggctccagggtggagacgcccgtgtcgtac
gtcggggaggatgacgaggacgaggacgacttcaacgagaacgaggaggaggactga
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