Sus scrofa (pig): 100621155
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Entry
100621155 CDS
T01009
Symbol
RRP1B
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
100621155 (RRP1B)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100621155 (RRP1B)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100621155 (RRP1B)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100621155 (RRP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
100621155
NCBI-ProteinID:
XP_020926718
Ensembl:
ENSSSCG00000021698
LinkDB
All DBs
Position
13:206629176..206653374
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AA seq
769 aa
AA seq
DB search
MAPAMQPAEIQFAQRLASHEKGIRDRAVKKLRQYISVKTQRETGGFSQEELLKIWKGLFY
CMWVQDEPLLQEELASAISQLVHVVNNSEAQHLFLQTFWQTVTREWTGIDRRRLDKLCML
TRLVLRQSFEVLKRSGWEESQIQLFLDVLMKEVLHPESQAPSGVKFHFVAIYLEELSRVG
GKELLADQNLKFIDPFCKVAARAKDHALVQTIARGVFEVIVDQSPLVPEGTLGVQKAREG
DSDLSEEETSESDMAWRRAAGKKPPAPGGPQSRKEGVGDGGRDDAGSSEDAGPLLQFDYR
AVAERLREVATSKDVPPFNRKRLSRLIRKFRDLSEGEENQKTVTAGRIPRLSFAEDAPAA
PDDRALSRGRRKRKASKLRGDAEVGREQGTKSFPAEEEEAEGGLRKRKRKRKKRNHLRPA
HLGPGGEAVCPEQNGSREPEAGPGKAQQTSAAELGAGAAPSLSRRKRLRKRSLRAQVQSP
ESAASPPEDAAPGGPASGPTQGVALAGGAPVLKKQRKLGALLVNGSGPPTRAWPPQEGPP
ARPADGGGCPAAVPQSGELGRKKGEPGGLDLRPPCARKAAVLKKRKKVSQMSPLAAHRGL
KLVQALGGAGILRPLRKELRTEKDFVKFEAAFSPKPLFFRKAKSSTTAPPGTPPQPNRTP
SSAKKVTFGLSRNMTAGPVTAPGAGGCRTEAPAVEWGLRLPPGRVQEDRQEPLGQSHGPL
PRGLQPRAEAAARGAEDAHQLAGRRAPGDQAAADSHAKEKAHGDGLLLG
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgccatgcagccggccgagatccagttcgctcaacggctggcgtcccacgag
aagggcatccgagaccgggcggtgaagaagctgcgccagtacatcagcgtgaagacacag
agggagacaggaggtttcagtcaagaagaacttctcaaaatatggaaagggctcttctac
tgcatgtgggtgcaggatgaaccccttctgcaggaggagctcgcgagcgccatttcccag
ctcgtccatgttgttaacaactcagaggctcagcacctgttcctgcagaccttctggcag
acagtgacccgggagtggacgggcatcgaccggcggcgcctggacaagctctgcatgctg
acccgtctggtcctgaggcagtcctttgaggttctgaagcgaagcggctgggaagaaagc
caaatccagcttttcctagacgtcctgatgaaggaggtcctgcacccggagagccaggct
ccgagcggcgtgaagttccacttcgtcgctatctacctggaggagctgtccagggtgggg
gggaaggagctcttggcagatcagaacctcaagtttattgatccattctgcaaggtcgca
gccagggccaaggaccacgctctggtgcagaccatagccaggggcgtttttgaagtcatt
gtagatcagtctcctctcgtgcctgaagggacgctcggggtacagaaagccagagagggt
gacagcgacctctctgaggaggagacctcggagagtgacatggcctggaggagagccgcc
ggcaaaaagccgccagcgccgggcggacctcagtccagaaaggagggcgtcggggacggc
ggacgggacgacgccgggagctcggaggacgccgggccgcttctccagtttgactaccgg
gcggtggccgagcggctccgggaagtcgccaccagcaaggacgtccctcccttcaacagg
aagcgcctctccaggctgatcaggaaattccgggacctctcggaaggtgaggaaaatcag
aagactgtaactgcaggcaggatccctcgcctcagttttgcggaggacgctcctgctgcc
ccagacgaccgagccctcagccgggggaggcgcaagagaaaggcctcgaagctccggggg
gacgcggaggtgggacgggagcaaggaaccaagtccttccctgccgaggaggaggaggcc
gaaggcgggctgcgcaagaggaagaggaagaggaagaagaggaaccacctccggcctgca
catctagggcctggcggcgaagctgtgtgcccagagcagaatgggagccgcgagccagaa
gctggtccaggaaaggcccagcagacgagtgcggctgagctgggggcaggggcggcgccc
tcgctcagcaggaggaagcgcctgaggaagaggagcctgagggcccaggtgcagagccca
gagtcagcagcgtcccctccagaggatgcggctccaggtggccccgccagcggtcccact
cagggagtggccctggccggcggcgccccagtcctgaagaagcagcggaaactcggggcc
cttctggtcaatggcagtggcccgcccacgcgggcctggcccccgcaggagggccctcca
gccaggccagcagatggagggggctgccccgccgccgtgccccagagtggggaactgggg
agaaagaagggggagcccggcggccttgacctccgccccccgtgcgctcggaaagctgcc
gtactgaaaaagaggaagaaagtgagccagatgtcccccttggcggcgcacagagggctc
aagctcgtccaggctctgggcggcgccgggatcctccgccctctgaggaaggagctgagg
acggagaaggactttgtgaagttcgaagccgccttctccccgaagcccctgttcttcagg
aaggccaagagcagcaccactgccccgccgggcacccccccgcagccaaacagaacaccg
tccagcgccaagaaggtgaccttcgggttgagcaggaacatgacggcaggccccgtgacg
gcaccgggggcgggcgggtgcaggacggaagcgccagccgttgagtggggccttcgcctt
cctccgggcagagttcaggaagaccgacaagagcctcttggtcagtcccacgggcccctc
ccgcgtggccttcaaccccgcgcagaggccgctgcacggggtgctgaagacgcccaccag
ctcgccggccggcgcgcccctggggaccaggcagccgctgacagccacgccaaagagaag
gcccacggcgatggacttcttctagggtag
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