Sus scrofa (pig): 100621192
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Entry
100621192 CDS
T01009
Symbol
BBX
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100621192 (BBX)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100621192 (BBX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100621192
NCBI-ProteinID:
XP_020926116
Ensembl:
ENSSSCG00000011943
LinkDB
All DBs
Position
13:complement(151718376..152005091)
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AA seq
979 aa
AA seq
DB search
MESLDLTGDERRGMEAFVQEKGDSAVQLVSARDLEVTVMKGSNRNKDHSAEGEGAGKRPK
RKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGADGLEQDVAETEDDESPEQRARR
PMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMK
ANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPSPKKTKTEEMPQLNFGMADP
TQMGGLSMLLLAGEHALGTPEISSGTCRPDVSESSELRQKSPLFQFAEISSSTSHPDAPS
KQCQASALFQFAEISSNTSQLGGAEPVKRCGKSALFQLAEMCLASEGVKMEESKLIKAKE
ADGGRIKELEKGKEEREIKMEKPDEARLQKEADVEKSAKENGRDSKELRNFEELRMDDIM
GIKMEDPKDIKKEELEEDQKCSHFPDFSYSASSKIIISDVPSRKDHLCHPHGIMIIEDPT
TLNKPEKLKKKKKKSKMDRHGNDKSTPKKTCKKRQSSESDIESVIYTIEAVAKGDWGIEK
LGETPRKKVRTSSSGKGSILDAKPPKKKVKSREKKMSKEKSSDTTKESRPPDFLSISASK
NIPGEVPEGIKAEPLTPTEDALPPSLPGQAKPEDSDCHRKIETCGFRKSERSCKGALYKT
LVSEGMLTSLRANVDRGKRSSGKGNSSDQEGCWNEESWTFNQIGTSGSKKFKKTKPKEDS
LLGSTKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGSMSSEPTKTSKGPFQSQKK
NLFHKIVSKYKHKKEKPNVPEKGSGDKWSNKQFFLDAIHPTEAIFSEDKNTTEPAYKVKN
APSIPNTPEPTTMQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRSL
PKVTEAGCNDECSHNREAAETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTH
DGQPKEMPQAPVLISCADQ
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtcttgacttgactggagatgagagaaggggaatggaggcctttgtacaggag
aagggggattctgcagtacagctggtctcagctagagacctagaggtcacagtaatgaaa
ggcagtaatagaaataaagatcattcagcagaaggagaaggggctggaaaacgaccaaaa
cgaaagtgtcttcagtggcatccattgctcgcaaaaaaacttcttgatttttcagaagaa
gaagaagaggaagacgaagaagaggatattgataaggttcagcttcttggggctgatggc
ctagagcaagatgttgctgagactgaagatgatgaatcaccagaacagcgagcccggaga
ccaatgaatgcatttctcttattttgcaaacgtcatcgctcccttgtacgtcaagaacac
cccagacttgataacagaggtgctaccaagatactagctgattggtgggctgttctcgat
ccaaaggaaaagcagaaatacacagacatggccaaggagtataaagatgcatttatgaaa
gcaaatcctggctacaaatggtgtcctaccacaaacaagcctgtcaaatccccaacaccc
actgtcaatccacgaaagaaactgtgggccttcccatccgactcttcaagagacttgcca
agccccaagaaaacaaagactgaagaaatgcctcagcttaactttggaatggccgatcct
actcagatgggaggcctgagcatgctgcttttagctggagaacatgctcttggcacacca
gagatatcttctggcacttgtaggcctgatgtttcagaatcatctgaattgcgtcagaag
tcaccattatttcagtttgctgagatatcttcaagtacatcccatcctgatgctccttca
aaacagtgtcaagcatcagccttgtttcagtttgcagagatttcttcaaacacttcacag
ttgggtggtgctgaacctgtaaaacgctgtggaaagtctgcactctttcagctggcagag
atgtgcctggcatcagagggggtgaaaatggaggaatcaaaactaataaaagcaaaagaa
gcagatggtggaagaattaaagaattggagaagggaaaagaagaaagagaaataaagatg
gagaaaccagatgaggccaggttacagaaagaagcagatgttgaaaaatcagccaaggaa
aatggaagagattctaaagaattaagaaattttgaggagctgcgaatggatgatataatg
ggaataaaaatggaagatcccaaagatattaaaaaggaagaattagaggaagatcaaaaa
tgtagtcacttccctgacttttcttactctgccagtagcaagataataataagtgatgtt
cccagtagaaaagatcatttgtgccatcctcatggaattatgatcattgaggatcccacc
acacttaacaagccagaaaagctgaaaaagaagaagaaaaaaagcaaaatggatcgacat
ggaaatgataaatccacacccaagaagacttgtaaaaagaggcagtcctcagagtctgac
attgagagtgtcatatacaccattgaagctgttgcaaagggagactggggcatcgagaag
cttggagaaacccctcgcaagaaggtccgcacatcctccagtggcaagggaagcattttg
gatgccaagccaccaaagaaaaaagtgaaatccagagagaagaaaatgtcaaaggagaaa
tcctcggacaccaccaaagagtcgagacctccagattttctcagtatttctgccagcaag
aacattcctggggaggtgccagagggtataaaagcagaaccgttgacccccacggaggat
gcgctaccacccagcctacctggacaggccaagcctgaggacagtgactgtcacagaaaa
atagagacttgtggcttccggaaatccgagaggtcttgcaaaggtgctctttataaaacc
ctggtgtctgagggcatgctcacctctctgcgagctaatgttgacagagggaaacgaagc
tcaggaaaaggaaactcttctgatcaggaagggtgttggaatgaggaaagttggacgttc
aaccagattgggaccagtggaagtaagaagttcaagaagacaaagccaaaggaagactct
ctccttggctcaacaaagctggatgaagaatttgaaaagaaattcaacagcctccctcaa
tatagtcctgttacatttgaccggaaatgtgtacctgtcccaagaaaaaagaaaaagaca
ggcagcatgtcctcagaaccaactaaaaccagcaaaggtcctttccagtctcagaaaaag
aacttattccacaaaattgtcagcaaatataagcacaaaaaggagaagcctaatgttccg
gaaaaaggaagtggggataaatggtcaaacaagcaattcttcttggatgccattcaccca
acagaagccatattttcagaagacaaaaacaccacagagcctgcttataaggttaaaaat
gccccatccattcccaacactccagagccaacaacaatgcaagaacctttggtgggcagc
caaaagagaaaagcaaggaaaaccaagatcacacaccttgtcaggacggcagatggccgg
gtatcaccagcaggaggtactttggatgacaaaccaaaggaacaactgcagaggagtctc
cctaaagtgaccgaggcaggctgcaatgatgaatgctcgcacaaccgggaggccgcggag
acgcgcagcagcaccccggagatgccagctgtgtctgccttcttcagcctcgcggcactg
gctgaggtggctgccatggaaaatgtgcacagaggtcagaggtcaactccgctcacccat
gatggacagccaaaagagatgccacaggctcctgtacttatttcctgtgctgaccagtga
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