Sus scrofa (pig): 100621229
Help
Entry
100621229 CDS
T01009
Symbol
SNF8
Name
(RefSeq) vacuolar-sorting protein SNF8
KO
K12188
ESCRT-II complex subunit VPS22
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100621229 (SNF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100621229 (SNF8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
100621229 (SNF8)
Membrane trafficking [BR:
ssc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
100621229 (SNF8)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100621229 (SNF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
AbiEi_4
TFIIE_alpha
EutK_C
RPA_interact_C
MarR_2
Plasmid_RAQPRD
DUF4896
Motif
Other DBs
NCBI-GeneID:
100621229
NCBI-ProteinID:
XP_003358131
Ensembl:
ENSSSCG00000021461
UniProt:
A0A4X1UL97
I3L6X7
LinkDB
All DBs
Position
12:complement(25142748..25152847)
Genome browser
AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK
NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFSIIPVGGTYLIQSVPAELNMDH
TVVLQLAEKNGYVTVSDIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF
TDLYSQEITAEEAREALP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgccgcggggtgggcgctggcgccatcgccaagaagaagcttgccgaggccaag
tataaggagcgagggactgtcttggctgaggaccaactggcccagatgtcaaagcagttg
gacatgttcaagaccaacctggaagaatttgctagcaagcacaagcaggagatccggaag
aatcccgagttccgggtgcagttccaggacatgtgtgccaccattggggtggatcctctg
gcctctggaaaaggattttggtctgagatgctaggcgtgggagatttctattacgagctg
ggtgtccagattatcgaagtatgcctggccctgaagcaccggaatggaggtctgataact
ctggaagaactacatcaacaggtgttgaaaggcaggggcaaattcgcccaggatgtcagc
caagacgacctgatcagagccatcaagaaactaaaggcccttggcaccggcttcagcatc
atccctgtgggcggcacgtacctcattcagtctgttccagccgagctcaatatggatcac
actgtggtgctgcagttggcagagaaaaacggctacgtgactgtcagtgatatcaaagcc
agtcttaaatgggagaccgagcgagcgcgacaagtgctggaacacctgctgaaggaagga
ctggcttggctggatctgcaggccccaggggaggcccactactggctgccggctctcttc
acggacctctactcccaggagattacagctgaggaggccagagaagccctcccctga
DBGET
integrated database retrieval system
