Sus scrofa (pig): 100621443
Help
Entry
100621443 CDS
T01009
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04120
Ubiquitin mediated proteolysis
ssc04137
Mitophagy - animal
ssc04144
Endocytosis
ssc04340
Hedgehog signaling pathway
ssc04350
TGF-beta signaling pathway
ssc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100621443 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100621443 (SMURF1)
04350 TGF-beta signaling pathway
100621443 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100621443 (SMURF1)
04137 Mitophagy - animal
100621443 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
100621443 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100621443 (SMURF1)
04121 Ubiquitin system [BR:
ssc04121
]
100621443 (SMURF1)
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100621443 (SMURF1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100621443 (SMURF1)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100621443 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
100621443 (SMURF1)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
HECT type E3
100621443 (SMURF1)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100621443 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
100621443
NCBI-ProteinID:
XP_020941773
Ensembl:
ENSSSCG00000007608
ENSSSCG00000030153
LinkDB
All DBs
Position
3:complement(6037732..6142569)
Genome browser
AA seq
811 aa
AA seq
DB search
MLKDYARRVISKAPFPFLPADVITDLKGIPEFAPPCSEMENLAVDADLLDARRLMNNNLL
GKVGTRYLVGSGLGFGLFFELARGSGITAGILGSHLSGVLCAKNLAKKDFFRLPDPFAKI
VVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRL
LSNAVSRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTRDRLGTGGPVVDCRGLLDNEG
TVYEDSGPGRPLSCFMEEPAPYTDGPGAAAGGGNCRFVESPSQDQRVQAQRLRNPEVRGP
LQTPQNRPHGHQSPELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRVPRDLNSVNCDELG
PLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQSLPLPSEGSVED
EELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKK
RLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHL
SYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILEND
ITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLA
LQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLDDWKSNTRLKHCGADSNVVRWFWQAV
ETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCF
NRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaggattacgcgaggagagttatttccaaagcaccttttccctttctcccagct
gatgttattacggatctgaagggaatccctgagtttgctcctccctgcagcgagatggag
aatttagctgtggatgcagacctgcttgatgccaggcgtctgatgaacaataatttactt
ggaaaggttggaaccagatacttggttggcagcggactaggttttggtctcttctttgag
cttgccagggggagtgggatcactgctggcatcttgggaagccatctttcaggagtatta
tgcgccaagaaccttgcaaagaaagacttcttccgactccccgacccctttgccaagatc
gttgtggacggatctgggcagtgccactcgacggacactgtgaaaaacacgttggacccc
aagtggaaccagcactacgacctatacgttgggaaaacggattccataaccatcagcgtg
tggaaccacaagaagattcacaagaagcagggagctggcttcctggggtgtgtgcggctg
ctgtccaatgccgtcagcagactgaaagacacaggataccagcgtctggatctatgcaaa
ctaaatccctcagatactgatgcagttcgtggccaaatagtggtcagcttacagacgcga
gaccgactaggcaccggaggccccgtggtggactgcagaggcctgttagacaacgaagga
accgtgtatgaagactcgggccccgggaggccactcagctgcttcatggaggaaccagcc
ccttacacggacggcccgggggccgcggcgggaggcgggaactgcaggtttgtggagtcc
ccgagtcaagatcagagagtccaggcccagcgacttcgaaaccccgaggtccgagggccc
ctgcagacgccgcagaaccgaccgcacggccaccagtccccggagctgcctgaaggctac
gagcagagaaccaccgtgcaggggcaggtgtacttcctgcacacgcagactggagtcagc
acctggcacgaccccagggtacccagagaccttaacagcgtgaactgtgatgaacttgga
ccactgccacccggctgggaagtccgaagtaccgtttccgggagaatatattttgtagat
cataacaaccgaacgacccagtttacagacccgaggttacaccacatcatgaatcaccag
tgccaactcaaggagcccagccagtcgctgcccctgcccagcgagggctccgtggaagac
gaggagcttcccgcccagagatacgagagggacttggtccagaaactgaaggtcctcaga
cacgaactctccctccagcagccgcaggccggtcactgtcgcatcgaagtctccagagag
gagatattcgaggagtcttatcgccagataatgaagatgcgaccaaaggacctgaaaaag
cgactcatggtgaagttccgtggagaagaaggtttggactatggcggggtggcgagggag
tggctgtacctgttgtgccatgaaatgctgaatccgtactacggcctcttccagtattct
accgacaacatctacatgctgcagatcaaccccgattcttccatcaaccctgaccatctg
tcttacttccactttgtgggccgcatcatgggtctggctgtgttccacgggcactacatc
aacgggggcttcacggttcccttctacaagcagctgctggggaaacccatccagctttcg
gacctggagtcggtggacccagaactgcacaagagcttagtgtggattctggagaacgac
atcacgccggtgctggaccacaccttctgcgtggagcacaacgctttcgggaggattctg
cagcacgagctgaaacccaacggcagaaacgttcccgtcacggaggagaacaagaaggaa
tacgtgcggttatacgtaaactggaggtttatgaggggaatcgaagcccagttcttagct
cttcagaaaggctttaatgaactcatccctcagcacttactgaagccttttgaccagaag
gagctggagctgatcatcggcggcctggacaagatcgacctggacgactggaagtccaac
acgcggctcaagcactgcggggctgacagcaacgtggtccggtggttctggcaggcggtg
gagaccttcgacgaggagcggagggcccggctcctgcagttcgtgaccggctccacgcgg
gtccccctccagggcttcaaggccctgcaaggttctacaggcgccgcagggccccggctc
ttcaccatccacctgattgatgccaacacggacaacctgcccaaggcccacacctgcttt
aaccggatcgacattccaccttatgagtcgtacgagaagctgtacgagaagctgctgacg
gcggtggaggagacctgcgggtttgccgtcgagtga
DBGET
integrated database retrieval system
