Sus scrofa (pig): 100621574
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Entry
100621574 CDS
T01009
Symbol
HIF3A
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100621574 (HIF3A)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100621574 (HIF3A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1
PAS
PAS_4
PAS_9
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
100621574
NCBI-ProteinID:
XP_020950258
Ensembl:
ENSSSCG00000003101
LinkDB
All DBs
Position
6:52342893..52376339
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AA seq
844 aa
AA seq
DB search
MERIIEPSCPGGGGPTPPPPHSSSHPLFPGPGPPAQGGPPTPTLWAGRQTGLEQNGTGGR
NVLWAEQDWRPLPPASQAGEGEGNCWLPPCLPQPGPFYASHPVARNSFFLICLRRKESPL
LSPDQASGWARRSPAGEDKESSTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSA
HLDKASIMRLTISYLRMHRLCAAGEWNQVGAGGEPLDACYLKALEGFVMVLTAEGDMAYL
SENVSKHLGLSQLELIGHSIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMK
STLTSRGRTLNLKAATWKVLHCSGHMRAYKPPSQTSPAGSPGPNLEPPLQCLVLICEAIP
HPDSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYRPDDLIGCSAYEYIHALDSDAVG
QSIHALLSKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQVEET
EVVLSLEQTERHSRRPIQRGTPSQEDAPNPGDSLDTSGPRILAFLHPPTLSEAALAADPR
RFCSPDLRRLLAPILDGTSVAATPSAPPATRCPQSPLPADLPDELLADVENAHKFFASGK
DLDAVETDLDIAQDADALDLEMLAPYISMDDDFQLNSSEQLPRAYHRLSGAVPRPRARSF
HGMSPPTPEPTLLPRWGSDPRLSCSSPSRGVPSAASPMAGARKRALAQSSEDEAEGVELL
GVRPPKRSPSPEPENFLLPPLSLAWAPPCSPSPGMRTPPSPGATSSQRQTWPRPTEPSPL
PTSLPPPAERTPIILQAGSQRTGWGCRERGSLSSQGPPPALGLPQPPPLRTPYCLGRSGV
VSAQ
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattatagagcccagctgcccaggaggtggggggccaaccccacccccaccc
cattcctcttcccaccccctgttccctgggcctgggcccccagctcagggaggcccaccc
acccccaccctctgggcaggaagacaaacagggctggagcagaacgggacaggaggacgg
aatgtcctctgggcggagcaggactggaggcccctgccccccgccagccaggcgggagag
ggtgagggcaattgctggctccctccatgcctcccccagcctggccccttctatgcctcc
cacccagttgcaaggaacagttttttcctcatctgtctgcggagaaaggagagtcccctc
ctctccccggaccaagcctctgggtgggcccggaggtctcctgctggggaggacaaggag
tcgagcaccgagctgcgcaaggagaagtcccgggatgcggcccgcagccggcgcagccag
gagaccgaggtgctgtaccagctggcacacacgctgcccttcgcgcgtggggtcagcgcc
cacctggacaaggcctccatcatgcgcctcaccatcagctacctgcgcatgcaccgcctc
tgcgccgcaggggagtggaaccaggttggagcagggggcgaaccattggacgcctgctac
ctgaaggccctggagggtttcgttatggtgctcaccgccgagggagacatggcttacctg
tcggagaatgtcagcaaacacctgggcctcagtcagcttgagctgatcggacacagtatc
ttcgattttatccatccctgtgaccaagaggagcttcaggacgctctgactccccggcag
agcctgtccaaaaagaagccggaggcccccaccgagcggtgcttctccttgcgcatgaag
agcacgctcaccagccgcgggcgcaccctcaacctcaaggcggccacctggaaggtactg
cactgttctggacacatgagggcctacaagcccccttcgcagacttcccccgctgggagc
cccggccccaacctggagccccccctgcaatgcctggtgctcatctgtgaagccatcccc
caccctgacagcctggagcctccgctgggccggggggccttcctcagccgccacagcctg
gacatgaagttcacctattgtgacgagaggatcgcggaggttgccggctacaggcccgat
gacctgattggctgttccgcctacgagtacatccacgcgctggactcggacgccgtcggc
cagagcatccacgctttgctgagcaagggccaggcagtcacggggcagtaccgcttcctg
gcccggagtggtggctacctgtggacccagacccaggccacagtggtgtcagggggccgg
ggcccccaatctgagagtatcgtctgcgtccacttcctgatcagccaggtggaagagacc
gaagtggtgctgtccctggagcaaacggagcggcactctcgcagacccattcagcggggc
accccctctcaggaggatgctcctaatcctggggacagccttgacacctctggtccccgg
atcctggccttcctgcacccccctaccctgagtgaagctgccctggccgctgacccccgt
cgcttctgtagccctgacctccgtcgcctcctggcaccgatcctggatgggacttcagta
gctgccacccccagcgcacccccggccacacggtgcccccaaagtcctcttccggctgat
ctcccagatgaactgcttgcagatgtggagaacgcacacaaattctttgcctctgggaaa
gacctggatgcagtggagacagacctagatatagctcaggacgccgacgctctggatttg
gagatgctggccccctacatctccatggatgatgacttccagctcaactccagcgagcag
ctgcccagggcctaccaccgactttcaggggctgtcccccggccccgtgctcggagtttc
cacggcatgtcgcccccaacccctgagcccactctgctgccccgctgggggagcgacccc
cggctgagctgctccagcccttccagaggggtcccctcagcagcttcccccatggctggg
gcccggaagagggccctggcccagagctcagaggatgaggcagagggggtggagctgctg
ggagtgagaccccccaaacggtcccccagcccagaacctgaaaacttcctgctgcctccc
ctcagcctggcctgggcccctccctgctctccctctcccgggatgaggacgccgcccagt
ccaggagccacttccagccagcggcagacttggcccaggcccactgagcccagccctctt
cccacctccctcccgccccccgcagagaggacgccaatcatactccaagccggcagccaa
cgcacagggtgggggtgccgggagaggggttccctctcctctcaggggcccccacccgcc
ttgggcctacctcagcccccacccctccgtaccccctactgtctggggcgctctggagtg
gtctcagctcagtga
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