Sus scrofa (pig): 100621659
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Entry
100621659 CDS
T01009
Symbol
AIRE
Name
(RefSeq) LOW QUALITY PROTEIN: autoimmune regulator
KO
K10603
autoimmune regulator
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04120
Ubiquitin mediated proteolysis
ssc05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100621659 (AIRE)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
100621659 (AIRE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100621659 (AIRE)
04121 Ubiquitin system [BR:
ssc04121
]
100621659 (AIRE)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
100621659 (AIRE)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100621659 (AIRE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSR
PHD
PHDvar_NSD
SAND
zf-HC5HC2H
PHD-1st_NSD
zf-HC5HC2H_2
Prok-RING_1
PHD_2
Motif
Other DBs
NCBI-GeneID:
100621659
NCBI-ProteinID:
XP_020925516
Ensembl:
ENSSSCG00000025294
LinkDB
All DBs
Position
13:207148401..207158355
Genome browser
AA seq
668 aa
AA seq
DB search
MAGEARAGGDAALRRLLRLHRTEIAVAVDSAFPLLHALADHEVVPEDKFQVGPNPDQQRP
SLPQARAQEPAGSQKTGVPGEGKAGPPSPALLQETLRLKEKEGCSQAFHALLSWLLTRDT
AVILDFWRVLFKDYNLERYARLQPILDSFPKDVDLSQPRKARKPLASSKAAVLLPRPPAK
RKALEEPRATPPTALSPRATSSPGSQAKAKPSKKPDSNAEPQCLPLGNGIQSMSTSVQRA
VAVSSGDVPGAHGALEGILIQQVFGSAGSKKCIQVGGEFYTPSKFEEPGSGGGSSTKNKT
RSGGGGLKTVVRAKGPQAVAPGGGNSRTGQQDRAPAPPALPSEPQPHQKNEDECAVCRDG
GELICCDGCPRAFHLACLSPPLRDIPSGTWRCSSCLQGRSQQDLPRAEAPRPQEPPAETP
VLLGLRSAGEEARGLPREPPAGMDAAVTYKHLLAPPSAVPLPVLDPSALRPLLCVGPEGP
QGPASGARCGVCGDGADVLRCAHCAAAFHWRCHFPAGAARPGXERGPGRGKGRGEGGRVP
PAPPPLREPPSRVDAPSSAQPRSLFSLARASPRCRFCSGDPAPCHAPGAGAPASSPAPSP
ARPAPGTPKLCAAAGPAAQAGDDSAGHEPVLHKDDLESLLSEHPFDGILQWAIQSMSRPL
AEAPTFPS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgaggcccgtgcgggtggggacgccgcgctgcgccgcctcctgaggctgcac
cgcacggagatcgcggtggcggtggacagcgccttcccgctgctgcacgcgctggccgac
cacgaagtggtccccgaggacaagttccaggtgggccccaatccagaccaacaacgcccc
agccttccccaagcccgcgcccaggagcccgcagggtcgcagaagaccggggtacctggg
gagggcaaggcaggacccccatcccctgctttgcttcaggagaccctgcggctgaaggag
aaggagggctgctcccaggccttccacgcgctcctctcctggcttctgacccgggacacg
gccgtcatcctggacttctggagggttctcttcaaggactacaacctggagagatatgcc
aggctgcagcccatcctcgacagcttccccaaagatgtggacctcagccagccccggaag
gcaaggaagcccctggccagctccaaggccgctgtgctgctgcccaggccccctgccaag
aggaaggccctggaggagccgcgggccaccccgcccacagccctgtccccgagggccacc
tccagcccaggctcccaggccaaggccaagccctccaagaagccggacagcaatgcagag
ccacagtgcctcccgctgggcaatggaatccagagcatgtccacttcggtccagagagcc
gtggccgtgtcgtccggggacgtcccaggggcccacggggccctggagggaatccttatc
cagcaggtgttcggctcagctggctccaagaagtgcatccaggttgggggggagttttac
actcccagcaagtttgaagagcctggcagcggcggcggcagcagcaccaagaacaagacc
cgcagtgggggcggcggcctgaagaccgtggtccgagccaaggggccccaagcggttgcc
cctggtggaggcaattcgaggaccggccagcaggacagggccccagcccctcctgccctt
cccagtgagccccagccgcaccagaagaacgaggacgagtgcgccgtgtgccgggacggc
ggggagctcatctgctgtgacggctgtccccgggccttccatctggcctgcctgtccccg
ccactcagggacatccccagcgggacctggaggtgctccagctgcctccagggacgatcc
cagcaggacctgccccgggctgaggcgccccggccccaggagccgcctgcagagaccccg
gtcctcttgggactgaggtcagccggagaggaggctaggggactgcccagggagccccca
gcgggaatggatgctgctgtcacctacaagcacctgctggccccaccttccgcagtcccc
cttcctgtgctggacccctcagccctgcgccccctactgtgtgtgggccctgaggggcca
cagggcccagcgtccggcgcgcgatgcggcgtgtgcggggacggcgcggacgtgctgcgg
tgcgcacactgcgccgccgccttccactggcgctgccacttcccggcgggcgccgcccgg
cctgggtgagagcgggggccagggagggggaaggggaggggcgagggagggcgggtgccc
cccgccccgccaccgctccgcgaaccaccctctagagtggacgctcccagctctgcgcag
ccccgcagcctcttctctctcgccagggcctccccgcgctgtagattctgctccggagac
cccgccccctgccacgcccccggggcgggagcgccggcctctagccccgcccccagcccc
gcccgcccggctcccgggacccccaagctctgtgcagccgcgggccctgcggcgcaggcg
ggggatgattctgctggtcacgagcctgttctgcacaaggatgacctagagtccctcctg
agtgagcaccccttcgacggcatcctgcagtgggccatccagagcatgtcccgcccgctg
gccgaggcgcccaccttcccctcctga
DBGET
integrated database retrieval system
