KEGG   Sus scrofa (pig): 100622043
Entry
100622043         CDS       T01009                                 
Symbol
HTATSF1
Name
(RefSeq) LOW QUALITY PROTEIN: HIV Tat-specific factor 1
  KO
K13093  HIV Tat-specific factor 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssc03041]
    100622043 (HTATSF1)
Spliceosome [BR:ssc03041]
 Complex A
  Other components
   Complex A specific factors
    100622043 (HTATSF1)
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 100622043
NCBI-ProteinID: XP_020935550
Ensembl: ENSSSCG00000023062
LinkDB
Position
X:111624303..111643566
AA seq 759 aa
MSGNNLDANDEFDEQLRMQELYGDTKDGDTQKDPGGETDSFGQQPADTPYEWDLDKKAWF
PKITEDFIATYQANYGFSNDGASSSAASVQDVSARTTEEPPQRKTPEPSDPRKKGEKRKA
ESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDNQGNL
KGDGLCCYLKRESVDLALKLLDEDEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKL
SMQQKQLDWRPERRAGPSRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQ
IRKLLLFDRHPDGVASVSFREPEEADYCIQTLDGRWFGGRQITAEAWDGTTDYQVEESTR
EREERLRGWEAFLNAPEANSGPPRAAAAAACAPERAGPSRARHFSQRPGAPGANVPEAAT
EQALEEAVDAKKFEKPEDGGEAEEAASGTDAKESGPDKEAGEGRPPREREAGCPAGAEGG
AGKGPEGPPAQEAKENGSGRESRTKRLKTAPEENGLEREPEAEGPGGEPEPEAAADGGGD
SERESEDRCSDPDPDPDPQREAGSGENGLGQGVEDGASDGGPKEAAPGREPEDNDSEKSE
LGDDSSGKVFDEEDSEKELDEESEEKEEEEDAYEKVFDDESDEKEDEEDAEEKGPEDADE
RDEDDDADEKVFEDSDGKDDEEDVDAKEGEDTDDRMFQDDDSNEKLFDDDSSDKLFEDSD
ERGTVGGLGDVKEEGPLSTGSSFVLSSDDDDDDDDDDDI
NT seq 2280 nt   +upstreamnt  +downstreamnt
atgagcggcaacaacttggatgcgaatgatgagtttgatgagcagttgcgaatgcaagaa
ttgtacggagacaccaaggacggcgacacccagaaagatcccggtggagaaaccgattct
ttcgggcagcagccggctgacaccccgtacgagtgggacctggacaagaaggcttggttc
cccaagatcactgaagatttcattgctacatatcaggccaattacggcttttctaatgat
ggtgcgtctagctctgctgcaagtgtccaggatgtcagtgctaggaccacagaggagcct
ccgcaaaggaaaacccctgaacccagtgatcccagaaagaaaggagaaaagagaaaggct
gaatcaggatggtttcatgttgaagaagacagaaatacaaatgtttatgtgtctggtttg
cctccagacattacagtggatgagtttattcagctcatgtctaagttcggcattattatg
agagatcctcaaacagaagagtttaaggtcaagctttacaaagataatcaaggaaatctt
aaaggagacgggctctgctgttacctgaagagagaatctgtggatcttgcattaaaactt
ttggatgaagatgaaatcagaggctacaaattacatgtggaggtggcaaagtttcaactg
aagggggaatatgatgcctcaaagaagaagaagaagtgcaaagactacaagaaaaagctg
tctatgcaacaaaagcagttggactggagacctgagagaagagcaggcccatcccgaatg
cgccatgagcgagttgtcatcatcaaaaatatgtttcatcctatggattttgaggatgat
ccactggtgctgaatgagatcagagaagaccttcgagtagagtgttcaaagtttggacaa
attaggaagctccttctctttgatagacacccggatggcgtggcctctgtgtcctttagg
gagccggaggaagctgattattgtattcagacccttgatgggaggtggtttggtggccgt
cagatcactgccgaggcgtgggatgggactacagattatcaggtggaggagagcacgaga
gaaagggaggagaggctgcggggctgggaggctttcctcaacgcccccgaggccaacagc
ggccctcctcgggccgccgccgctgctgcctgtgctcccgaaagggccgggccttcgaga
gccaggcatttctcacagcgccctggcgcacctggagcgaatgttccagaagccgcgact
gagcaggcgttggaagaagctgtagatgcaaagaagtttgaaaagccagaagatgggggt
gaagctgaagaagccgcttcgggaacagacgctaaagaaagtggccctgacaaggaggct
ggagaaggccgccccccgagggagcgggaggcgggctgccccgcgggcgcggagggcggc
gccgggaaagggccggaggggcctccggcccaggaggccaaggagaacggctccggacga
gaatccagaacgaagaggctcaaaacggcccccgaagagaacggcctggagagggagccg
gaggcggagggcccgggcggggagcctgagccggaggcggccgcagacggcggcggcgac
tcggagcgcgagtccgaagaccgctgctcggacccggacccggacccggacccgcagcgt
gaggccggctcgggcgagaacggcctggggcagggcgttgaggacggcgcctccgacggg
ggaccgaaggaagccgctcctggcagagagccggaggacaatgactcagaaaagtccgag
ctcggagacgacagctccggcaaggtgttcgatgaggaagactccgagaaagagttggac
gaagagtccgaggagaaggaagaggaggaggatgcgtatgaaaaagtgttcgacgatgag
tcggacgaaaaggaggacgaagaggatgccgaagaaaaggggccagaagatgctgatgaa
agggacgaagacgacgacgcggatgaaaaggtgtttgaagattcagacggaaaagacgac
gaggaagacgtagatgccaaggagggtgaagacacagatgacaggatgttccaagacgac
gattccaacgagaagttgtttgatgacgattctagtgataagctgttcgaagattctgac
gagcgagggactgtgggtggcttaggggatgttaaggaggaagggcccctgtccacaggc
agcagctttgtcctcagcagtgacgacgacgacgacgacgacgacgacgatgatatttaa

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