Sus scrofa (pig): 100622106
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Entry
100622106 CDS
T01009
Symbol
CHRNA6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc04082
Neuroactive ligand signaling
ssc04725
Cholinergic synapse
ssc05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100622106 (CHRNA6)
04082 Neuroactive ligand signaling
100622106 (CHRNA6)
09150 Organismal Systems
09156 Nervous system
04725 Cholinergic synapse
100622106 (CHRNA6)
09160 Human Diseases
09165 Substance dependence
05033 Nicotine addiction
100622106 (CHRNA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100622106 (CHRNA6)
Ion channels [BR:
ssc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
100622106 (CHRNA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CAP_N
Motif
Other DBs
NCBI-GeneID:
100622106
NCBI-ProteinID:
XP_003359919
Ensembl:
ENSSSCG00000023338
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All DBs
Position
17:complement(11725880..11739949)
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AA seq
494 aa
AA seq
DB search
MLTLEGQGYPRFGLGLWWCVFTLFFKGCAGCASEERLFHTLFSHYNQFIRPVENVSDPVT
VHFEVAITQLADVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDI
VLYNNAVGDFQVEGKTKALLQYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWT
YDKAEIDLLIIGSKVDMDDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLP
MFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVI
PLVGEYLLFTMIFVTLSIAVTVFVLNIHYRTPTTHTMPTWVKTLFLRLLPHILMMRRPLD
KRREARSAKTPNGVSRGPAKGKVDHHGEPPPLQECCRCHQPKEPATGKRRLSHQPLRWMT
DHTEPSPEVEDVMDSVQFIAENMKHQNQTKEVEDDWKYVAMVVDRVFLWVFIIVCVFGTV
GLFLQPLLGNTGSS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccctcgagggtcagggatacccacgctttgggctgggtctctggtggtgtgta
ttcacgctgttctttaaaggctgtgcaggctgtgcatctgaggagagactcttccacaca
ctgttttctcactacaaccagttcatcaggcctgtggaaaatgtctcggaccctgtcacg
gtgcactttgaagtggccatcacgcagctggccgacgtggatgaagtaaaccagatcatg
gaaaccaacttgtggctgcgtcacatctggaatgactataaattgcgctgggacccgatg
gaatatgatggcattgagacgctccgtgttcctgcggataagatctggaagcctgacatc
gttctctacaacaatgctgtcggcgacttccaggtcgagggcaagaccaaagctcttctt
caatatgatggcatgataacctggactccaccagctatttttaagagctcctgtcctatg
gacatcacttttttcccttttgatcatcaaaattgttccctgaaatttggttcctggacc
tatgacaaagctgaaattgatctcctcatcattggctctaaggtggacatggatgatttt
tgggaaaacagtgagtgggaaattgtcgatgcctctggctacaagcacgacataaagtac
aactgctgtgaagagatctacacggacataacctattctttttacatcaggagactgccg
atgttttacaccattaatctgatcatcccctgcctctttatttcatttctgaccgtgctg
gtcttctacctcccctctgactgtggggaaaaagtgacgctgtgcatttcagtgctgctg
tctctgaccgtgtttttgctggtgatcacggaaaccatcccctccacgtccctcgtgatc
cctctggtgggcgagtacctgctgttcaccatgatcttcgtcaccctgtccatcgcggtg
acggtgtttgtgttgaatatacactatcgcaccccgaccacacacaccatgcccacgtgg
gtgaagacactcttcctccggctgttaccccacatcctgatgatgaggaggcccctggac
aagaggagggaggcgagatctgctaaaactcccaacggggtctccagggggcctgccaaa
ggcaaggtggatcatcacggagagcccccgcctcttcaagaatgctgccgctgtcatcaa
cccaaggagcccgccaccggcaagaggcgactaagtcatcagcctttacgatggatgaca
gaccatacagagccctcacctgaagttgaagatgtgatggatagtgttcaattcatagca
gaaaacatgaagcaccaaaatcaaacaaaggaggtagaggacgactggaaatacgtggcc
atggtggtggacagggtgttcctgtgggtgtttataattgtctgtgtgtttggaaccgtg
gggctgtttctccagccactcctggggaatacaggaagttcataa
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