Sus scrofa (pig): 100622166
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Entry
100622166 CDS
T01009
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100622166 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100622166 (TRIP12)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100622166 (TRIP12)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
HECT type E3
100622166 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
100622166
NCBI-ProteinID:
XP_020930716
Ensembl:
ENSSSCG00000024373
LinkDB
All DBs
Position
15:complement(130784567..130940497)
Genome browser
AA seq
2072 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPKALQHTESPSETNKPHSKSKKRHLDQEQQQLKSAQSPSTSKAHTRK
SGAAAASRSQKRKRTESSCIKSGSVSESTGAEERSAKPTKLASKSAASAKAGCSTITDSS
SAASTSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGS
SKFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAEL
PSLRRSTRQKTTGSCASASRRGSGLGKRGAAEARRQEKMADPEGNQETVNSSAARTDETP
QGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTI
GSGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQM
EHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSR
RHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRL
THQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPVLSSGMFIMV
VRMFSLMCSNCPTLAVQLMKQSFTDIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELT
SLICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAH
QVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDAR
AQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKN
HAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLL
TSPPKACTNGSGSLGSTTSVSSGTATAATNATADLGSPSLQHSRDDSLDLSPQGRLSDVL
KRKRLPKRGSRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSN
NIEPARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVL
QRLCAATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAV
SREIRLKRFLHVFFSSPLPGEEPIGRVEPVGSAPLLALVHKMNNCLSQMEQFPVKVHDFP
SGNGTGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIER
YLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVY
QAVRQFSIQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESNKDCVGGKRGRAQ
TAPTKTSPRNAKKHDELWNDGVCPSVSNPLEVYLIPAPPENITFEDPSLDVILLLRVLHA
ISRYWYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPF
FFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLK
QAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNP
KGSQEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGL
PFYKWMLRQETSLTSHDLFDVDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETL
TMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDS
FRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLF
EILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCV
NYLKLPDYSSIEIMREKLLMAAREGQQSFHLS
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccgcaagacgactcgataggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagttgcagttcatca
tctgctgtcatagtcccacaaccagaggatccagacagagccaatacttcagaaaggcag
aaaacggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctagctctgcaaaaaaaccaaaagcacttcagcatact
gaatctccctcagaaacgaataagccacatagtaagtcaaagaagaggcatttagaccag
gagcaacaacagctgaaatctgcacaatctccatccacaagcaaggctcacaccagaaag
agtggggccgctgctgcttcacggagtcagaaaagaaagaggacagagagttcttgtata
aagagtggttctgtgtcagagtcaactggtgctgaagagagatctgcaaaacctaccaag
ctggcttcaaaatcggccgcctcagccaaagctgggtgtagcaccatcaccgattcttct
tctgctgcctcgacttcctcctcgtcttctgctgtagcctcggcctcctctactgttcca
ccaggtgccagggtgaaacaaggaaaagaccagaacaaggccaggcgttcccgttcggcg
tccagtccgagccccaggaggagtagcagggaaaaggaacagagtaaaactggtggctct
tcaaaatttgattgggctgctcgcttcagccctaaagttagccttcctaaaacaaaactg
tctcttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggcc
aaattagcaagtttaagaaaatctaccaagaagcgcagtgaatctccacctgctgagctc
cccagtttgaggcggagcacacgccaaaagaccacgggctcctgtgctagtgccagtcgg
cgaggctctggcctgggcaaaagaggagcagctgaagctcgtcgacaggagaagatggca
gaccctgaaggcaaccaggagacggtgaattcttcagctgcacggacagacgagacgccc
caaggagcggcagcttctagttctgttgcaggggctgtgggcatgaccacctctggggag
agtgaatcagatgattccgagatgggacgattgcaagctctcttagaggccaggggtctc
cctcctcacctgtttggtcctcttggtcctcggatgtcacagcttttccacagaacaatt
ggaagcggagctagttctaaggcccagcaacttctgcagggacttcaagcaagtgatgaa
agtcagcaacttcaggcagttattgaaatgtgtcagttattggtcatgggaaacgaggag
acactgggagggtttcctgtcaagagtgtcgttccggctttgataacattactgcaaatg
gagcataattttgacattatgaaccatgcttgtcgagccttaacatacatgatggaagca
cttcctcgatcatctgctgttgtagtagatgcaattcctgtctttttagaaaagctgcaa
gttattcagtgtattgatgtggcggagcaggccttgacggccttggaaatgctgtcacgt
agacacagtaaagccattctacaggcgggtggtttggcagactgcttgctgtatctagag
ttcttcagcataaatgcccaaagaaacgcgttagcaattgcagccaattgctgccagagt
atcacgccagatgaatttcattttgtggcagattccctcccattgcttacccaaaggcta
acccaccaggacaaaaagtcagtagaaagcacttgcctttgttttgcacgtctcgtggac
aacttccaacacgaggagaatttgctccagcaggttgcctccaaagatctgctaacaaat
gttcaacagctgttggtagtgaccccaccagttctaagctctgggatgtttataatggtg
gtccgcatgttctccctgatgtgctccaactgcccaactttggctgttcagcttatgaag
caaagttttacagacattgcggaaacccttcactttctcctgtgtggtgcctccaatgga
agttgtcaggagcagattgatctcgttccacgaagtcctcaagagctatatgaactgaca
tctctgatttgtgaacttatgccatgtttaccaaaagaaggcatttttgcagttgatacc
atgctgaagaagggaaacgcacagaacacagacggtgcgatatggcagtggcgtgatgac
cggggcctttggcatccctataaccggattgacagccggatcattgaggtagcagcccat
caggtcggtgaggatgagataagcttgtccactctgggacgagtttatactattgatttt
aattctatgcagcaaatcaatgaggacacgggaacagcacgtgccattcagagaaaacct
aaccccttagccaatactaacactagtggatattcagagttaaagaaggatgatgctcga
gcacagctcatgaaagaggatccggaactggctaagtcttttattaagacattatttggt
gttctttatgaagtgtatagttcctcagcaggacctgcggtcagacataagtgccttaga
gcaattcttaggataatttatttcgcggatgccgaacttctaaaggatgtcctgaaaaat
catgctgtttcaagtcacattgcttccatgctatcgagccaagacctgaagattgtcgtt
ggagctcttcagatggcagagatattaatgcagaagttacctgatatttttagtgtttac
ttcagaagggaaggtgtaatgcatcaagtgaaacacttagcagaatcggaatcattgttg
acaagtccaccaaaggcgtgtacgaatgggtcgggatccttggggtccacgacgtcggtc
agcagtggaacagccacggctgccactaacgccacagctgacctggggtcccccagcttg
cagcacagcagagacgattctttagatctgagccctcaaggtcgattaagtgatgttcta
aaaagaaaacgactgccaaaacgaggatcgagaaggccaaagtattcacctccaagagat
gatgataaagtagacaatcaagctaaaagccccaccacgactcagtcaccgaaatcttct
ttcctggcaagcttgaatccaaaaacgtggggtcggctaagcgcgcagtccaacagcaac
aacattgagccggctcgaactgcaggggttagtggtcttgccagggccgcctcaaaggac
accatatccaataatagggaaaaaattaaaggttggattaaagagcaggcgcataaattt
gtggagcgttatttcagttccgagaacatggatggaagcaaccctgcgctgaatgtcctc
cagagactttgtgctgcgactgaacaactcaacctccaggtggatggtggagctgagtgc
cttgtagaaatccgtagcatagtctcagagtcagatgtttcatcgtttgaaatccagcat
agtggatttgtgaagcagctgttgctttatttgacctctaaaagtgaaaaggatgctgtg
agcagagagatcagattaaagagattccttcatgtgtttttttcttctccacttcctgga
gaagagcccattggaagagtagaaccagtgggcagtgcccctctgttggcgttagttcac
aagatgaacaactgcctcagtcagatggaacaatttccagtcaaagtgcatgacttcccc
agtgggaacgggacgggtggcagcttttctctcaacagaggatcacaggctttaaaattt
ttcaacactcatcagttaaaatgccagttacaaagacacccagactgtgccaatgtgaag
cagtggaagggcggacctgtcaagattgaccccctggctttggtacaagctatcgagaga
taccttgtcgttagagggtatggacgagtaagagaagatgatgaagacagtgacgatgac
ggctccgacgaggaaattgatgagtctttggctgctcagttcttaaattcaggaaatgta
agacacaggctacagttttacatcggagaacatttgctgccatataacatgactgtgtac
caggcagtccggcaattcagtatacaggctgaagatgagagggaatccacggacgatgag
agcaatcctctaggaagagctggtatctggacgaaaactcacacaatctggtacaaacct
gtgagagaggatgaagaaagtaataaagactgtgttggtggtaaaagaggaagagcccaa
acagctccaacaaaaacgtcccctagaaatgcaaaaaagcatgatgagctatggaatgac
ggagtgtgcccatcagtatcaaatcctctagaagtttacctcatccccgcgccacctgaa
aatatcacttttgaagacccgtcattagacgtgattcttcttctaagagtgttacatgcc
atcagtcgatactggtactacttgtatgataatgccatgtgcaaggagattatcccaact
agtgaatttattaacagtaagttgacagcaaaagcaaataggcaacttcaagatccttta
gtaatcatgacaggaaacatcccaacgtggctcactgaactgggaaaaacctgcccattt
ttcttccctttcgatacccggcaaatgcttttttacgtaactgcatttgatcgggatcga
gcaatgcagagattacttgataccaacccagaaatcaaccagtctgattctcaagatagc
agagttgcacctagattggatagaaaaaaacgtactgtgaaccgagaggagctgttgaaa
caagcagagtctgtgatgcaggatcttggcagctcccgggccatgttggaaatccagtat
gaaaatgaggttggcacagggcttgggcctacactggagttttatgcacttgtatctcag
gaactacagagagctgacctgggtctctggagaggtgaagaagtaactcttagcaatcca
aaaggaagccaagaagggaccaagtatattcaaaacctccaaggcctgtttgcacttccc
tttggtcgaacagctaagccagctcatatcgcaaaggttaagatgaagtttcgcttctta
ggaaaattaatggccaaggctatcatggatttcagattggtggaccttcccctgggctta
cctttttataagtggatgctccggcaagaaacttcgctgacgtcacacgatttgtttgac
gttgacccggttgtagccagatccgtgtatcacctagaagacattgtcagacagaagaaa
agacttgaacaagataaatcccagaccaaagagagtctacagtatgcattggaaaccctg
accatgaacggttgctcagtggaggatctagggctggacttcacactgccaggattcccc
aacatcgaactgaagaagggcggcaaggacatacccgttaccatccacaacttagaggag
tatctcagactggttatattctgggcactgaatgaaggcgtttccaggcagttcgattca
ttcagagatggcttcgagtcagtcttcccgctcagtcacctgcagtacttctatcccgaa
gagctggaccagctcctgtgtggcagtaaagcggacacctgggatgccaagactctgatg
gagtgctgcaggccggaccacggctacacgcacgacagtcgggctgtgaagttcttgttt
gagattctcagtagttttgataatgagcagcagaggttatttctccagtttgtgacaggt
agcccgagattgcctgttggaggcttccggagtttgaatccacctctgacaattgtccgg
aagacattcgaatccacggagaatccagacgacttcctgccctctgtaatgacctgtgtg
aactatctcaagttgccggactattcgagcatcgagatcatgcgggagaagctgttgatg
gcggcaagggaagggcagcagtcgttccatctgtcctga
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integrated database retrieval system
