Sus scrofa (pig): 100622208
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Entry
100622208 CDS
T01009
Symbol
RBM23
Name
(RefSeq) probable RNA-binding protein 23 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
100622208 (RBM23)
Spliceosome [BR:
ssc03041
]
Common components
Common spliceosomal components
General mRNP proteins
100622208 (RBM23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RSRP
RRM_occluded
RRM_5
RRM_7
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
100622208
NCBI-ProteinID:
XP_020954909
Ensembl:
ENSSSCG00000026700
UniProt:
A0A4X1UZA6
LinkDB
All DBs
Position
7:76120725..76132148
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AA seq
531 aa
AA seq
DB search
MFPRLRRSGKVLEDCGAAAILREVEQLRLLWCFYCGVSGRETYLAPSDTPRGTEGTGVPL
RGPGTELWWTDLGKTIARCQSLGSATMASDDFDIVIEAMLEAPYKKEEDEQQRKEINEES
PNTTTNSTSSTSNSGSGTSGSSASGEASKKKRSRSHSKSRDRKHSRSRDRDRDRHRRRGS
RSRSRDRQRRHRSRSWDRRHSESRSRDRRREDRVHYRSPPLATGRRYGHSKSPHFREKSP
VREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIA
YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGTGGPMRLYVGSL
HFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELA
GRPMRIGHVTERLDGSTDITFPDGDQELDLGSAGGRLQLMAKLAEGSGIQLPTTAAAAAA
QAAALQLNGAVPLGALNPAALTALSPALNLASQAIASQCFQLSSLFTPQTM
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgcgcctgcgcagatcggggaaggttctggaagactgtggagctgccgccatt
ttgcgggaagtggagcagctccggttgctgtggtgcttttattgcggagtgtctggaaga
gagacatacttagcaccctccgacacacccagaggaaccgaaggaaccggggtccccctg
cggggacccggaactgagctatggtggacagacttgggaaagacgattgctagatgtcaa
agcttgggatctgctacaatggcatccgatgactttgatatagtgattgaggccatgctg
gaggctccctataaaaaagaggaggacgagcagcagaggaaagagatcaacgaggagagc
cctaacaccaccaccaatagcaccagcagcaccagcaacagtggcagtggtaccagtggg
agcagcgccagtggggaggcaagcaagaaaaagaggagtcggagccatagtaaaagcagg
gatagaaaacacagtcgtagtcgagaccgggaccgggatcgtcacaggcggagaggcagt
cggagccgaagtcgagatcggcagcgtcgtcaccgcagccgcagctgggatcgtcgacac
agtgagtcacgaagtcgagaccggcgtcgtgaggatcgtgtgcactacaggagtccaccg
cttgccactgggcgtaggtatggacacagtaagagtcctcatttcagagagaagagcccg
gtcagggagcctgttgataatctgagtcccgaggagcgtgatgcccgcacagtgttctgt
atgcagttagctgcgcgcattcggccccgagacctagaggactttttctctgctgttggc
aaggttcgagacgtacgtatcatctcagatcggaactcacgtcgttctaagggcatcgcc
tacgtggaattctgtgagatccagtctgtgccactggccattgggctaaccgggcagcgg
ctgctgggagtgcctatcattgtacaggcctcacaggctgagaaaaaccgactggcagcc
atggccaacaacctgcagaagggcactgggggaccaatgcgcctctatgtgggctcgctg
cacttcaatatcaccgaggacatgctccgtggcatctttgagccctttggcaaaatcgat
aatattgtcctaatgaaggactcagatacaggccgctctaaaggttatggttttatcacg
ttctctgactctgagtgtgcccgacgggctctggaacagttgaatggctttgagcttgct
ggtcgacctatgaggattggccatgtgactgagcggctggatggcagcacagacatcacc
tttcctgatggagaccaggagctggacctgggatcagcaggtggacgtctgcagctcatg
gccaagttggcagaaggctctggaatccagctgccaaccactgctgccgctgccgctgcc
caagctgctgccttgcagctgaatggagcagttcctttgggggccctgaacccagcagct
ctgactgctctgagtccggccctgaacctggcctcccaggcaatcgcctcccaatgcttc
cagctttccagcctttttaccccccagaccatgtaa
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