Sus scrofa (pig): 100622285
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Entry
100622285 CDS
T01009
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04064
NF-kappa B signaling pathway
ssc04622
RIG-I-like receptor signaling pathway
ssc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100622285 (TRIM25)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100622285 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100622285 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100622285 (TRIM25)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100622285 (TRIM25)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100622285 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-B_box
C5HCH
Golgin_A5
FapA
Motif
Other DBs
NCBI-GeneID:
100622285
NCBI-ProteinID:
XP_005657028
Ensembl:
ENSSSCG00000017614
Vega:
OTTSUSG00000001773
LinkDB
All DBs
Position
12:complement(33184039..33212440)
Genome browser
AA seq
632 aa
AA seq
DB search
MAELCPLAEELSCSICLEPFKVPVTTPCGHNFCGLCLDETWAVQGPPYLCPQCRTGYETR
PQLRKNTVLCAVVEQFLQAEQARPAVLDSDGWTPPARAAASSPAGQVACDHCLQATAVKT
CLVCMASFCQEHLRPHLDSPAFRDHPLQPPVRDLMRRKCPQHNRLRDFFCPEHSECICHV
CLVEHKTCSPAPLSQASTDLENKLRHKLTIMYSQINGASRALEDVRAKQQDVRVSAHRKM
DQLRQEYMEMKAHIDAYEANSTRKIKEEEKRVNSKFDHIYQVLLKKKSEIQTLKEEVELA
LTKGDEFEFLEKAAKLQGITTKPVYVPKVELNHELIKGVCQGTSDLKNELKRYLRQSQDK
KPEEPTAPGDPGGYSLPSMPKPARPGKKVLKEEKKTKKPATASSSKISFGAPEHLDIKET
GQEGAAKVPLEPSTSVPLSGKVLETFLAKSRPELLEYAVKVILDYNTAHNKVALSQNFTV
ASAADTSQDYQPHPQRFTYCSQVLGLHCYKKGIHYWEVELQKNNFCGVGVCYGSMPRHGP
ESRLGRNSASWCVEWFNTKISAWHNNVEKTLPSTKSTRVGVLLNCDHGFVIFFAVADKVH
LLYKFKVAFAEALYPAFWVFSAGATLSICSTR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactgtgccccctggccgaggagctgtcatgctccatctgcctggagcccttc
aaggtgccggtcaccacgccgtgcggccacaacttctgcgggttgtgcctggatgagacg
tgggccgtccagggcccgccgtacctgtgcccgcagtgtcgcacgggctacgagacgcgg
ccgcagctgcgcaagaacaccgttttgtgcgcggtggtggagcagttcctgcaggccgag
caagcccggcccgcggtcctcgacagcgatggctggacgccgcccgcccgcgccgccgcc
tccagcccggccggccaagtggcctgtgaccactgcctacaggcgaccgccgtcaagact
tgtctcgtgtgcatggcctccttctgccaggaacacctgaggccgcacctcgacagcccc
gccttccgggaccacccgctgcagccgccagtccgagacctgatgcgccgcaagtgcccc
cagcacaaccggcttcgagacttcttctgccctgagcacagcgagtgcatctgccacgtc
tgcctggtggagcacaagacctgctcgcctgcacccctgagccaggccagcaccgacctg
gagaacaagctgaggcataaactgactatcatgtacagtcagatcaacggtgcatcgaga
gcgctggaggacgtgagagctaaacagcaggatgtgcgggtgagtgcgcacaggaagatg
gaccagcttagacaagaatacatggaaatgaaggctcacattgatgcttatgaggccaac
tcgactcgaaaaataaaagaagaggagaagagggtcaacagcaagtttgaccacatttac
caggtcctcctcaagaagaagagtgagatccagaccctgaaggaggaggtggaacttgcc
ctgactaagggggacgagtttgagtttctggagaaagcagcaaaactacaaggaatcacc
acgaagcctgtctacgtccccaaggtggagctgaaccatgagctgataaagggcgtctgt
cagggcacctccgacctcaaaaatgagctgaagcggtacctcagacagtcccaggacaag
aagcccgaggagcccactgccccaggggaccctggagggtacagcctgccgtccatgccg
aagcctgcacgacctgggaagaaggttctgaaagaagaaaagaaaaccaagaaacctgcc
actgcctcatccagcaagatcagcttcggcgccccggaacacttggatatcaaagaaact
ggccaggagggtgcagccaaagtccccctcgagccatcgacctcggtgcctctcagcggg
aaggtgctggaaacctttctcgccaagtccaggcccgagctcctggagtatgccgttaaa
gtcatcctggactacaacaccgcccacaacaaggtggccctgtcccagaacttcaccgtc
gcttctgcggccgacacgtcccaggactaccagccacatccccagaggttcacctactgc
tcgcaggtgttgggcctgcactgctacaagaaagggatccactactgggaggtggagctg
cagaagaacaacttctgcggggtaggcgtctgctacggcagcatgccgcgccacggcccc
gagagccggcttggccgcaacagcgcctcctggtgcgtggagtggttcaacaccaagatc
tcggcctggcacaacaacgtggagaaaaccctgccctccaccaagtccacgcgggtgggg
gtgcttctcaactgcgatcacggctttgtcatcttcttcgccgtggccgacaaggtccac
ttgctgtataagttcaaggtggcctttgcggaggcgttgtacccggccttctgggtgttc
tccgcaggtgccacactctccatctgctccaccaggtag
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integrated database retrieval system