KEGG   Sus scrofa (pig): 100622285
Entry
100622285         CDS       T01009                                 
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04064  NF-kappa B signaling pathway
ssc04622  RIG-I-like receptor signaling pathway
ssc05164  Influenza A
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100622285 (TRIM25)
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    100622285 (TRIM25)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    100622285 (TRIM25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100622285 (TRIM25)
Enzymes [BR:ssc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100622285 (TRIM25)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100622285 (TRIM25)
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_2 zf-C3HC4_3 zf-C3HC4_4 RING_XB3-XBAT31 ANCHR-like_BBOX zf-B_box C5HCH Golgin_A5 FapA
Other DBs
NCBI-GeneID: 100622285
NCBI-ProteinID: XP_005657028
Ensembl: ENSSSCG00000017614
Vega: OTTSUSG00000001773
LinkDB
Position
12:complement(33184039..33212440)
AA seq 632 aa
MAELCPLAEELSCSICLEPFKVPVTTPCGHNFCGLCLDETWAVQGPPYLCPQCRTGYETR
PQLRKNTVLCAVVEQFLQAEQARPAVLDSDGWTPPARAAASSPAGQVACDHCLQATAVKT
CLVCMASFCQEHLRPHLDSPAFRDHPLQPPVRDLMRRKCPQHNRLRDFFCPEHSECICHV
CLVEHKTCSPAPLSQASTDLENKLRHKLTIMYSQINGASRALEDVRAKQQDVRVSAHRKM
DQLRQEYMEMKAHIDAYEANSTRKIKEEEKRVNSKFDHIYQVLLKKKSEIQTLKEEVELA
LTKGDEFEFLEKAAKLQGITTKPVYVPKVELNHELIKGVCQGTSDLKNELKRYLRQSQDK
KPEEPTAPGDPGGYSLPSMPKPARPGKKVLKEEKKTKKPATASSSKISFGAPEHLDIKET
GQEGAAKVPLEPSTSVPLSGKVLETFLAKSRPELLEYAVKVILDYNTAHNKVALSQNFTV
ASAADTSQDYQPHPQRFTYCSQVLGLHCYKKGIHYWEVELQKNNFCGVGVCYGSMPRHGP
ESRLGRNSASWCVEWFNTKISAWHNNVEKTLPSTKSTRVGVLLNCDHGFVIFFAVADKVH
LLYKFKVAFAEALYPAFWVFSAGATLSICSTR
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggcggaactgtgccccctggccgaggagctgtcatgctccatctgcctggagcccttc
aaggtgccggtcaccacgccgtgcggccacaacttctgcgggttgtgcctggatgagacg
tgggccgtccagggcccgccgtacctgtgcccgcagtgtcgcacgggctacgagacgcgg
ccgcagctgcgcaagaacaccgttttgtgcgcggtggtggagcagttcctgcaggccgag
caagcccggcccgcggtcctcgacagcgatggctggacgccgcccgcccgcgccgccgcc
tccagcccggccggccaagtggcctgtgaccactgcctacaggcgaccgccgtcaagact
tgtctcgtgtgcatggcctccttctgccaggaacacctgaggccgcacctcgacagcccc
gccttccgggaccacccgctgcagccgccagtccgagacctgatgcgccgcaagtgcccc
cagcacaaccggcttcgagacttcttctgccctgagcacagcgagtgcatctgccacgtc
tgcctggtggagcacaagacctgctcgcctgcacccctgagccaggccagcaccgacctg
gagaacaagctgaggcataaactgactatcatgtacagtcagatcaacggtgcatcgaga
gcgctggaggacgtgagagctaaacagcaggatgtgcgggtgagtgcgcacaggaagatg
gaccagcttagacaagaatacatggaaatgaaggctcacattgatgcttatgaggccaac
tcgactcgaaaaataaaagaagaggagaagagggtcaacagcaagtttgaccacatttac
caggtcctcctcaagaagaagagtgagatccagaccctgaaggaggaggtggaacttgcc
ctgactaagggggacgagtttgagtttctggagaaagcagcaaaactacaaggaatcacc
acgaagcctgtctacgtccccaaggtggagctgaaccatgagctgataaagggcgtctgt
cagggcacctccgacctcaaaaatgagctgaagcggtacctcagacagtcccaggacaag
aagcccgaggagcccactgccccaggggaccctggagggtacagcctgccgtccatgccg
aagcctgcacgacctgggaagaaggttctgaaagaagaaaagaaaaccaagaaacctgcc
actgcctcatccagcaagatcagcttcggcgccccggaacacttggatatcaaagaaact
ggccaggagggtgcagccaaagtccccctcgagccatcgacctcggtgcctctcagcggg
aaggtgctggaaacctttctcgccaagtccaggcccgagctcctggagtatgccgttaaa
gtcatcctggactacaacaccgcccacaacaaggtggccctgtcccagaacttcaccgtc
gcttctgcggccgacacgtcccaggactaccagccacatccccagaggttcacctactgc
tcgcaggtgttgggcctgcactgctacaagaaagggatccactactgggaggtggagctg
cagaagaacaacttctgcggggtaggcgtctgctacggcagcatgccgcgccacggcccc
gagagccggcttggccgcaacagcgcctcctggtgcgtggagtggttcaacaccaagatc
tcggcctggcacaacaacgtggagaaaaccctgccctccaccaagtccacgcgggtgggg
gtgcttctcaactgcgatcacggctttgtcatcttcttcgccgtggccgacaaggtccac
ttgctgtataagttcaaggtggcctttgcggaggcgttgtacccggccttctgggtgttc
tccgcaggtgccacactctccatctgctccaccaggtag

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