Sus scrofa (pig): 100622375
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Entry
100622375 CDS
T01009
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100622375 (SHANK3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
PDZ_6
Ank_3
SH3_9
Ank_5
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
100622375
NCBI-ProteinID:
XP_020946926
LinkDB
All DBs
Position
5:complement(41376..93033)
Genome browser
AA seq
1874 aa
AA seq
DB search
MQLSRAATAAAVAPAEPSAPLSPAPAPAPAPPGPLPHSAADGAPAGGQGGPGRREEPQCA
QLAAASGPSPGAGMDGPGASAVVVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLCALNHSL
QDALNYGLFQPPSRGRAGKFLDEERLLQEYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQF
AKLHTKANLKKFMEYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDDAADLLK
VLRNGGAHLDFRTRDGLTAVHCATRQRNAAALTTLLDLGASPDYKDSRGLTPLYHSALGG
GDALCCELLLHDHAQLGTTDENGWQEVHQACRFGHVQHLEHLLFYGADMGAQNASGNTAL
HICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVPFR
ETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGEVQPAASPGPSLRSLPHQLLLQRLQE
EKERDRDGDQENDGSGPAAGRGSQSKISPSGPGGPGGPGPAPGPGPAPPAPPAPPPRGPK
RKLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADC
VEEVQMRQYDTRHAPARPALRSICSWTHPPILPSISSSINAPGRPGRPAAPFHHLPSSPD
LQPTLFLSSGCTSIYPETREDRTKRLFRHYTVGSYDSLSAHSDYVIDDKVAILQKRDHEG
FGFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKV
GHKQVVALIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELE
ELASIRRRKGEKLDEILAAATEPTLRPDIADADSRAATVKQRPTSRRITPAEISSLFERQ
GLPGPEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDSVREGRGIPPPPQTAP
PPPPAPYYFDSGPPPAFSPPPPPGRAYDTVRSSFKPGLEARLGAGAPGLYDSGAPLGPLP
YPERQKRARSMIILQDSAPEVGDVPRPPPAATPPERPKRRPRPPGPDSPYANLGAFSASL
FAPSKPQRRKSPLVKQLQVEDAQERAALAVGSPGPGGGSFAREPSPTHRGPRPSGLDYGP
GDSPGLAFGGPAPAKDRRLEERRRSTVFLSVGAIEGSSPSADLPSLQPSRSIDERLLGPG
TTTTGRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALA
SQAPSRSPTPVHSPDADRPGPLFVDVQARDSERGPLASPAFSPRSPAWVPVPARREPEKA
PREERKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPSGLGAEEEHPGTPELTPAP
TQSAVVAEPLPSPRVQPPGSTPADPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREEL
ARIGLVPPPEEFANGVLLATPLPGPGPSPTTVPGPASGKPSSEPPPAPESAADSGVEEAD
TRSSSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSP
LGKGPVTFRDPLLKQSSDSELMAQQHHAASAGLASAAGPARPRYLFQRRSKLWGDPVESR
GLPGPEDDKPTVISELSSRLQQLNKDTRSLGEEPVGGLGGLLDPAKKSPIAAARLFSSLG
ELSSISAQRSPGGPGGGASYPVRPGGRYPVARRAPSPVKPASLERVEGLGAGAGGAGRPF
GLTPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPAPGPGPGPGPGAPGPR
RPFQQKPLQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGH
RMNIERALRQLDGS
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagccgcgccgccaccgccgccgctgtcgcccctgcggagccctcggcgccg
ctgtcccccgcgccggccccggccccggccccccccggccccctcccgcacagcgcggcc
gacggggctccggcggggggtcagggggggccgggtcgccgcgaggagccccagtgcgcc
cagctcgcggccgcgagcggccccagcccgggcgcggggatggatggccccggggccagc
gccgtggttgtgcgcgtcggcatcccggacctgcagcagacgaagtgcctgcgcctggac
ccggccgcgccggtgtgggccgccaagcagcgcgtgctctgcgccctcaaccacagcctc
caggacgcgctcaactacgggctctttcaaccgccctcccggggccgcgccggcaagttc
ctggacgaggagcggctcctgcaggaatacccgcccaacctggacacgcccctgccctac
ctggagtttcgatacaagaggagagtttatgcccagaacctcattgatgataagcagttt
gcaaagcttcacacaaaggcgaacctgaagaagttcatggaatatgtgcagctgcacagc
acggacaaggtggcccgcctgctggacaaggggctggaccccaatttccacgatcctgac
tcaggagagtgtcccctgagtctcgcggcccagctggacgatgccgcggacctgctgaag
gtgctgcggaacggtggtgctcacctggacttccgcactcgcgacggcctcaccgcggtg
cactgcgccacccgccagcggaatgcggcggctttgacgaccctgctggacctgggtgcc
tcacctgactacaaggacagccgcggcctgacgcccctgtaccacagcgccctgggtggg
ggggacgccctctgctgtgagctgcttctgcacgaccatgctcagctggggaccacggat
gagaacggctggcaggaggtccaccaggcctgccgctttgggcacgtgcagcacctggag
cacctgctgttctatggagccgacatgggggcccagaacgcctcggggaacacagccctg
cacatctgcgccctctacaaccaggagagctgtgcccgtgtcctgcttttccgtggagcc
aacaaggatgtccgcaactacaacagccagacagccttccaggtggccatcatagcaggg
aactttgagcttgcggaggtcatcaagacccacaaagattcggatgttgtaccattcagg
gaaacccccagctatgcgaagcggcggcggctggctggccccagcggcctggcctctcct
cggcccctgcagcgctcagccagtgacatcaacctgaagggtgaggtgcagccagcagct
tctcctggaccttcgctgcgaagcctcccccaccagctgctgctccagcggctgcaggag
gagaaagaacgggaccgagacggtgaccaagagaatgacggcagcggccccgcagcaggc
aggggcagccagagcaagatcagcccgagcgggcccggcggccccggcggcccgggcccc
gcgcccggccccggcccggcgccccccgcgccccccgcgccgccgccacggggcccgaag
cggaaactttacagcgccgtccccggccgcaagttcatcgccgtgaaggcgcacagcccg
cagggcgaaggcgagatcccgctgcaccgcggcgaggccgtgaaggtgctcagcattggg
gagggcggtttttgggaggggaccgtgaaaggccgcacgggctggttcccggccgactgc
gtggaggaggtgcagatgagacagtatgacacgcggcatgcccctgctcgacctgctctt
cgatccatctgttcttggactcacccacccatcctgccatccatctcttcatccatcaac
gcgcctggacgaccaggccgcccagcagctccttttcatcatctaccatccagccccgac
ctccagcccactctctttctctcatctggttgtacatccatttaccctgaaacccgggag
gaccggacgaaacgacttttccgccactacacagtgggctcctatgacagcctctccgca
cacagcgattatgtcattgacgacaaggtggctatcctgcagaaacgggaccacgagggc
tttggttttgtgctccggggggccaaagcagagacgcccatcgaggagttcacgcccacg
ccggccttccccgcgctccagtatctcgagtccgtggatgtggagggtgtggcctggagg
gctgggctgcggacgggagacttcctcatcgaggtgaacggggtgaacgtggtgaaggtc
gggcacaagcaggtggtggctctgatccgccagggcgggaaccgcctcgtcatgaaggtg
gtgtcggtgacaaggaagccagaagaagatggggctcggcgcagagccccgccgcccccc
aagagggcccccagcaccacgctgaccctgcgctccaagtccatgacggcggagctcgag
gagcttgcctccattcggagaaggaaaggggagaagctggatgagatcctggcagctgcc
acagagccgacgctgaggccggacatcgccgatgctgactcaagagctgccaccgtcaaa
cagcggcccacgagtcggaggatcacccctgctgagatcagttcattgtttgagcgccag
ggcctcccgggcccagagaagctgccaggctccctgcggaaggggattccacggaccaag
tctgtaggagaggatgagaagctggcgtccctgctggaggggcgcttcccgaggagtacg
tccatgcaggattccgtgcgcgagggccgtggcatccccccgccgccgcagaccgcgccg
ccaccgccgcccgctccctactacttcgactccgggccgccccccgccttctcgccgcct
ccgccgccgggtcgcgcctacgacaccgtgcgctccagcttcaagcccggcctggaggcg
cgcctgggcgcgggagccccaggcctgtatgattccggcgcgcccctgggtccgctgccc
tacccagaacggcagaagcgcgcgcgctccatgatcatccttcaggactcggcgcccgag
gtgggcgacgtccctcggcccccgccagccgccaccccgccagagcgccccaagcgccgg
ccgcggccaccgggccccgacagcccctacgccaaccttggcgccttcagcgccagcctc
ttcgcgccgtccaaacctcagcgccgtaaaagcccgttggtgaagcagctgcaggtggaa
gatgcgcaggagcgcgcggccctggccgtgggcagccctggcccgggcggcggcagcttc
gcccgtgagccctccccgacgcaccgcgggcctcggccgagcggcctcgactacggcccc
ggggacagccctgggctcgcgttcggcggcccagccccggccaaggaccggcggctggag
gagcggcggcgctccaccgtgttcctgtccgtgggagccatcgagggcagctctccgagc
gcagacctgccctccctgcagccttcccgctccatcgacgagcgccttctggggcccggc
actaccaccaccggccgcgacctgctgctgccctcccctgtctctgctctcaagccattg
gtcagcggcccgagccttgggccttcgggctccaccttcatccacccgctcaccggcaaa
cccctggaccccagctcacccttggcccttgccctggctgcccgcgagcgggctctggcc
tcccaggcaccctcccgctcccccactcctgtgcacagccctgacgccgaccgccctggg
ccattatttgtggatgtgcaggcccgtgactctgagcgagggcccctggcctccccagcc
ttctcccccaggagcccagcctgggttcctgtgcctgctcgcagggagcctgagaaagct
ccccgggaagagcggaagtcgccggaggacaagaagtccatgatcctcagcgtcttggac
acgtccctgcagcggccggccggcctcatcgtcgtgcacgctaccagcaatgggcaggag
cccagcgggctgggggccgaagaggagcacccgggcaccccagagctgaccccagccccc
acacagtcagcagtggtggcagagcccctgcccagcccgcgcgttcagccccctggcagt
accccagcagaccccgggccaggccagggcagctcagaggaggagccagagctggtattc
gctgtgaacctgccgcccgcccagctttcctccagcgacgaggagaccagagaggagctg
gcccgcatcggactggtgccgcctcccgaagaatttgccaacggggtcctgctggccacc
cccctccctggcccaggtccctcgcccaccacggtgccaggcccggcctcagggaagccg
agcagcgagccgccccctgcccccgagtctgcagcggattcgggggtggaggaggccgac
acgcgcagctccagcgacccccacctggagacaacgagcaccatctccacggtgtccagc
atgtccaccctgagctcggagagcggggaactcaccgacacccacacctccttcgccgac
ggacatacttttctactcgagaagccaccagtgcctcccaagcccaagctcaagtccccg
ctggggaaggggccggtgaccttcagggacccgctgctgaagcagtcctctgacagcgag
ctcatggcccagcagcaccatgccgcctccgccgggctggcctctgctgccgggcctgct
cgccctcgctacctcttccagagaaggtccaagctgtggggggaccccgtggagagccgg
gggctccccgggcctgaagacgacaaaccaactgtgatcagtgagctcagctcccgcctg
cagcagctgaacaaagacacccgctccctgggggaggagccggttggtggcctgggcggc
ctgctggaccctgccaagaagtcgcccatcgcggcagctcggctcttcagcagcctcggt
gagctgagctccatctcagcgcagcgcagccctgggggcccgggcggcggggcctcctac
ccggtccggcccggcggccgctaccccgtggcgcggcgcgccccgagcccagtgaagccc
gcgtcgctggagcgggtggaggggctgggggcgggcgcggggggcgcggggcggcccttc
ggcctcacgcctcccaccatcctcaagtcgtccagcctctccatcccgcatgagccgaag
gaggtgcgcttcgtggtgcgcagcgtgagcgcgcgcagccgctcgccctcgccgtccccg
ctgccctcgcccgcgcccggccccggccccggccccggcccgggggcccccggcccgcgc
cggcccttccagcagaagcccctgcaactctggagcaagttcgacgtgggcgactggctg
gagagcatccacttgggcgagcaccgcgaccgcttcgaggaccatgagattgagggcgcg
cacctgccggcgctcaccaaggacgacttcgtggagttgggcgtcacgcgcgtgggccac
cgcatgaacatcgagcgcgcgctcaggcagctggacggcagctga
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