Sus scrofa (pig): 100622540
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Entry
100622540 CDS
T01009
Symbol
C3H16orf62
Name
(RefSeq) UPF0505 protein C16orf62 homolog isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100622540 (C3H16orf62)
Membrane trafficking [BR:
ssc04131
]
Protein recycling
Others
Retriever complex
100622540 (C3H16orf62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4698
Motif
Other DBs
NCBI-GeneID:
100622540
NCBI-ProteinID:
XP_020942185
Ensembl:
ENSSSCG00000024946
ENSSSCG00000029976
LinkDB
All DBs
Position
3:complement(26039877..26157337)
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AA seq
997 aa
AA seq
DB search
MEGAGSGRANWAGGPRTSCHVTGKMATFPWHSRNRNYKAEFASCRLEAVPLEFGDYHPLK
PITVTESKTKKVSRKGSTSSTSSSSSSSVVDPLSSVLDGTDPLSMFAASADPATLTVAMD
SSRKKRDRDDNSIVGSDFEPWASKRGEILARYTTTEKLSINLFMGSEKGKAGTAASAMSE
KVRTRLEELDDFEEGSQKELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSK
LLSDTSVIQFYPSKFVLITDILDTFGKLVYERIFSMCVDNRSVLPDHFSPENVNDTAKET
CLNWFFKIASIRELIPRFYVEASILKCNKFLSKTGISECLPRLTCMIRGIGDPLVSVYAR
AYLCRVGMEVAPHLKESLNKNFFDFLLTFKQIHGDTVQNQLVVQGVELPSYLPLYSPAMD
WIFQCISYHAPEALLTEMMERCKKLGNNALLLNSVMSAFRAEFIATRSMDFIGMIKECHE
SGFPKHLLFRSLGLNLALADPPEGDRLQILNEAWKVITKLKNPQDYINCAEVWVEYTCKH
FTKREVNTVLADVIKHMTPDRAFEDSYPQLQSIIKKVIAHFHDFSVLFSVEKFLPFLDMF
QKEGVRVEVCRCIMEVFIKHQQEPTKDPVILNALLHVCKTMHDSVNALTLEDEKRMLAYL
INGFIKMVSFGRDFEQQLSFYVEARSMFCNLEPVLVQLIHSVNRLAMETRKVMKGNHSRK
TAAFVRACVAYCFITIPSLGGIFTRLNLYLHSGQVALANQCLSQADAFFKAAISLIPEVP
KTINIDGKMRPSESFLLEFLCNFFSTLLIVPDHPEHGVLFLVRELLNVIQDYTWEDNSDD
KIRIYTCVLHLLSAMSQETYLYHIDKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLK
TLAKDEVGAPGHLASSKGAWTLVCPVSTGSVCRPFTEGPRAFAPAVFSASQLLLAAPLIL
QVSAQVPPQSGFPRPPSQVAAVLLGLSVLFLGHSVTL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggagggggcggggtctggaagggcaaattgggctggcggtccccgaactagctgtcat
gtgactgggaagatggccacctttccctggcattcgaggaataggaactacaaggctgag
tttgcatcatgccggttggaggctgtaccgctggagtttggggactatcaccccctgaag
cccataactgtcaccgagtcaaagacaaagaaagtgagccggaaggggagcacttcctcc
acgtcctcctcatcctccagctccgtggtggaccctctgagcagcgtgctggatgggact
gaccccctctccatgttcgcagcctctgctgaccccgccaccctgacggttgccatggac
agctccagaaagaaacgagacagagatgataactccattgtcggatccgattttgagcct
tgggccagcaaacgaggagaaatccttgcccggtacacgaccacggaaaagctctccatc
aatctttttatgggatctgaaaaaggcaaagctggtactgccgcatctgcaatgtcagag
aaggttcggaccaggctggaggagctggatgacttcgaggagggatcccagaaggagctg
ttgaatttgactcaacaggattatgtgaaccgcattgaggagctcaaccagtcgctgaag
gacgcctgggcctcggaccagaaagtgaaggctctaaaaatagtcatccagtgttcaaag
cttctttcggacacaagtgtcattcagttctatccaagcaaatttgttcttatcaccgac
atacttgacacatttggaaagctggtgtacgagcgaatcttttccatgtgtgtggataac
cgcagcgtcttaccagatcacttctctccagagaatgtaaatgacacagccaaagaaaca
tgcttaaattggtttttcaagattgcttccatcagggaactgattccgagattttacgtg
gaagcatccatcctgaagtgtaacaagttcctctccaaaacggggatctcagagtgtctg
ccgaggctgacctgcatgatccgggggatcggggacccgctggtgtcggtgtacgccagg
gcctacctgtgcagggtgggcatggaggtggcaccacatctcaaagaaagcctaaataag
aacttttttgacttcctcctcacattcaaacagattcacggggacacggtccagaaccag
ctggtggtccagggagtggagctgccatcctacctgcccctgtactcgcctgccatggat
tggatcttccagtgtatctcctaccacgcccccgaggctctgttaaccgagatgatggag
agatgtaagaaactaggaaacaatgccttgctcttgaattctgtgatgtcagccttccgg
gccgagttcatcgccacacggtccatggatttcatcggcatgattaaagagtgccatgag
tctggcttccccaagcatctcctttttcgctcactggggttaaacttggccttggctgat
ccccccgagggtgaccgacttcagatcctcaatgaagcttggaaagttatcactaagttg
aagaatccacaggattacattaattgtgccgaagtatgggtagaatacacctgcaagcat
ttcacgaaacgagaggtgaacactgtcctggctgatgtcatcaagcacatgactccagat
cgtgcattcgaagactcctaccctcagcttcagtcaataattaagaaagtgatagcacac
ttccatgatttctcagttcttttctcagtggagaaatttctgccatttctggacatgttc
caaaaagagggtgtgcgcgtggaggtttgcagatgcatcatggaagtttttatcaagcat
cagcaagagcccaccaaggacccagtcattctgaacgcccttttgcatgtttgcaagacc
atgcatgactctgtgaatgcactcactcttgaggacgagaaaagaatgctggcctatttg
attaatggatttataaaaatggtgtcctttggccgtgattttgaacaacagctgagcttt
tacgtggaggccaggtcaatgttctgcaatctggaacctgttcttgtgcagctgatccac
agtgtgaaccggttggccatggaaacaagaaaagtcatgaaaggaaatcattccagaaag
acagccgcatttgtccgggcctgtgtcgcctactgcttcattaccattccctccctgggg
gggatcttcacccgcctcaatctctacctgcactcgggtcaggtggccttggccaaccag
tgcctctcccaagctgatgcctttttcaaagccgcaataagcctcattccagaagttcca
aagacgattaacatcgacgggaagatgcggccctcggagtcattccttctggaattcctc
tgcaacttcttttctacgttattaatagttccggatcatcctgaacacggggtcctgttt
cttgtccgagagctgctcaacgtgatccaggactacacctgggaggacaacagtgatgac
aaaatccgcatctacacctgtgtcctgcacctgctgtccgccatgagccaggagacctac
ctctaccacatagacaaagtcgactccaacgacagcctctacgggggagactccaagttt
ctggctgaaaacaacaaactgtgcgagacggtgatggctcagatcctggagcatctcaag
accctggccaaggatgaggtaggtgcccccggccacctggccagttccaagggcgcttgg
acattggtttgtcctgtgagtactgggtctgtgtgcagaccattcactgagggccccagg
gcctttgctcctgctgttttctctgcctcccagcttctcctggccgcccctctcatcctt
caggtctcagctcaagttcctcctcagagtggctttccccgacccccgtcccaagtcgcc
gccgtcctcctgggtctctctgtactgttcctgggacactcggtcactctctga
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