Sus scrofa (pig): 100622606
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Entry
100622606 CDS
T01009
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100622606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
100622606
Transporters [BR:
ssc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100622606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
ACT_13
R1_ABCA1
AAA_15
AAA_22
SRP54
AAA_23
AAA_30
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
100622606
NCBI-ProteinID:
XP_020944034
Ensembl:
ENSSSCG00000007848
LinkDB
All DBs
Position
3:complement(24608816..24809712)
Genome browser
AA seq
1521 aa
AA seq
DB search
MDLSWLNQFAVLLWKNFILKKRKVVSLTVEISLTFLFSALILLHRRDLAKDYRNATLFNP
LPLKELPGFLTDRKHEYILVYVPSESDVAKNITEMVKNDLNARLKVRGFSSEEDFERYIM
FVNKTTRVLAAIIFDHDFQNSNERLPLKVKYHLRFSRFSSPSDKLNGNRGWNTGLLFPVV
PSQGPRNLAQTDGGYPATLAVSVGGFLYFFTFFPFSVVSIMYEQLNLTEKLVSCLSSNIA
VALGIDFISKMEMKRRGVRWNNILSPVNPDDNFVFAHIMGMLLFDAFLYGLLAWYIDAVF
PGKYGVPKPWYFFMQKAYWLGKATSIRKKEESQVTNITHNAYFEDEPVDLVAGIMIQHLY
KEFTLQNTTVLAVQDLTLNMYEGQITVLLGHNGAGKTTTLSILTGFYRPTSGKVYINGYD
ISKDMLQVRKSLGLCPQDDILFSDLTVSEHLYFYCVIKGVPPEIRLKEVNTMLTSFGLLE
KRDALSKSLSGGMKRKLSIIIALIGGSKVVILDEPTSGMDPVSRRFTWDVLQQHKQNRTI
LLTTHHMDEADFLGDRIAIMAKGYLKCCGSSIFLKKTYGVGYHIIMVKEPHCHVKEITQL
IHHHVPEAILENNVAAELSFILPKEYTHRFKDLFADLEDRREELGIASFGISITTLEEVF
FRVSREENLASQTLKAKDEREDMNKNMNAPRNFERSYSSSLSSERSNIKFNTGWTLHCQQ
FSAMFIKRAMFYWRNWKIMLLQILGLLGIVYLLMKGVQIIIKGAEPGREMDLDQYGQTIV
PFSTSGNNDFTQNLTKNLEILLRAKKQKLHKVKGKSLFFYFLNDFYFFHHSWMEHYSVLS
CNKSVLLQDRSFPSRYLVCISFSYCLFNSVIFAIGQYCFLIPGRMDAYLANNSECIYSCI
IAFSIEVNGNQKRVTFWFNNEAYHSSSLSLAILDNIMFMSLSGPDASITVTNKPQPKYGT
SGKSDKIQMSGLNVALNLFFGMSIFISGFCLLTVTERVTKAKHIQFLSGVYAINFWLSAL
VWDFFIFFISCCLLLVVFLYSGSEVLVTDYHFLDTLFILMLFGWSVIPFMYLISFLFSSH
TSAYIKLVIFNYCAGVFGIHANVIVFLIIDKESASKSHMLNSMMLLPIHNLGMSISRYYD
FQQTKATCASKKNVPIFMNCSEEAMKRSVYGLEADAIGRFLIAMAVTGLIFFLLIFLLET
TSWTMRTFVFRSIFFGIYKKFNKERVSMELSVESEDEDVQNERNRILEYPQESLNSTVLI
KELAKIYFAMPAVFAVRNISVAIKKEECFGLLGLNGAGKTTSFQILTGEEVATSGDVFIE
HLSITKNVLKVRSKIGYCPQFDALLDYMTAREIMTMYARLWGIPEKQINHYVNKSIQSLN
LEPYADKFIYTYSGGNKRRLSTAIALMGKPSVIFLDEPSTGMDPVARRLLWNTVTQTRES
GKVIIITSHSMEECDALCTRLAIMVKGKFVCLGSPQHLKNKFGNVYILKAKIKIDKDENK
LKDFKDFMATTFPDVWYFGGS
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtcgtggctcaaccagtttgcagtcctcctctggaaaaatttcatactaaag
aagcggaaagtagtttctttaactgtggaaatttccttgacgtttctgttctcggcactg
attttgcttcatcgcagagacttggcaaaggattatcgaaatgccactcttttcaatcct
cttcctttgaaggaactgcccggtttcctcactgataggaagcatgaatatatactggtt
tatgtgccttctgaaagtgatgtggcaaaaaatattactgagatggtgaagaatgactta
aatgcccgtcttaaagttcgaggtttttcttcggaagaagattttgagaggtacattatg
tttgtaaataagaccactcgtgtgctggctgctattatatttgatcatgacttccaaaat
agcaatgagagattgccacttaaggtaaaatatcatctgcgttttagtaggttcagtagt
ccttcagataagttaaatggaaacaggggctggaatacaggtcttctctttccggtagta
ccttctcaaggacccaggaacctagctcaaacagatggaggatatcctgctacattggct
gtttctgttggaggtttcctctattttttcaccttctttccattttcagtagtttccatc
atgtatgaacagttgaacctcacagagaagctggtgtcctgtctcagttcaaatattgcc
gtagctttgggaattgattttataagcaagatggaaatgaagcgtcgtggtgttaggtgg
aataacatactgtcaccagtgaacccagatgataacttcgtttttgctcatattatggga
atgcttttatttgatgctttcttgtatggccttctggcctggtatatagatgctgtcttt
ccaggaaagtatggtgtgcccaagccatggtatttctttatgcagaaagcctactggctg
ggaaaagctacaagcattcggaaaaaagaagagagtcaagttactaatataactcacaat
gcttattttgaagacgaacctgttgatttggtggctggtatcatgatccaacatttgtat
aaggaattcacattacaaaatacgactgtactagcagttcaagacttgactttgaatatg
tatgaaggacaaatcaccgttcttctaggacacaatggggcaggaaagactactacctta
tctattctcacaggtttctatcgtcctacaagtggaaaggtatatattaatggctatgat
atttccaaagacatgcttcaagtcaggaaaagcttgggcttgtgcccccaggatgacata
ttgttttcagacttgacagtatcagaacatctctatttctactgtgtgataaaaggagta
cctccagagatacgcctcaaagaagttaacacgatgctgacttcttttggcctgctagaa
aagcgtgatgctctttcaaagtcactaagtggaggaatgaaacgcaaactctccatcatc
atagcactcataggaggctccaaggtggtgatacttgatgagccaacatctggcatggac
ccagtctcaaggagattcacctgggatgtccttcagcagcataaacaaaatcgtaccatc
ttgctgacaacccaccacatggatgaagctgacttcctgggcgaccgtatagctatcatg
gcaaagggatacctgaaatgctgtggctcttcaattttcctgaaaaaaacttatggtgtt
ggataccacataattatggtcaaggaacctcattgccatgttaaggaaattacccaactg
attcatcatcatgtaccagaagccatattggagaacaatgttgcagccgaattatcattt
atcctacccaaagagtatacacacaggtttaaagacctatttgctgatctggaagacaga
cgggaagagctgggcattgctagttttggtatatctatcactaccttggaagaagttttc
tttagggtcagtagagaagaaaatctagcttcccagaccctaaaagccaaagatgaaaga
gaagacatgaacaagaatatgaacgcacccagaaattttgagagatcatattcttcctca
ctctcgagtgaacgctctaatattaaatttaatactgggtggactcttcactgtcagcag
ttctctgccatgttcataaagagagcaatgttctattggcgcaactggaaaataatgttg
ctgcaaatactaggacttctgggtattgtttatttgttgatgaaaggtgtgcagattata
ataaaaggtgcagaacctggcagagaaatggatttggaccaatatggtcagacaattgtg
cccttctcaacttctggaaataatgattttactcagaatttaacaaaaaatcttgagatc
ttgctaagggctaagaaacaaaaacttcataaagtaaaaggtaagtctctctttttttat
tttttaaatgatttttattttttccatcatagttggatggaacattatagtgttctgtca
tgtaataagtctgtcttattacaagaccgatcatttccttctaggtacttggtttgtatt
tccttcagctactgtctgttcaacagtgttattttcgccattggtcagtattgttttctc
attccaggtcgtatggatgcatatttggccaataattcagaatgtatttattcatgcatt
attgcattttccattgaggttaatggaaaccaaaagagagttaccttctggttcaacaat
gaggcataccattcatcatcgttatcactggctatattagacaatattatgtttatgtca
ctttctggccctgatgcttccattacagtcaccaacaaacctcagcctaaatatggtact
tctggtaaatctgataaaatacaaatgtcaggactaaatgtagccttaaatttgtttttt
ggtatgagtattttcatcagtggcttttgtctcctgacagtgactgagagagtcactaag
gcaaagcacattcagtttttgagtggggtttatgccattaatttctggctctccgctcta
gtgtgggacttcttcatcttcttcatttcctgctgcttactgctggtggtgtttctgtac
tctggatcggaagtactggtcacggattaccactttctggacacattgttcatcctcatg
ctgtttggctggtctgtcattcccttcatgtacctgataagtttcctgttttctagtcat
accagtgcctacatcaagctcgtcatatttaactactgtgcaggggtttttggtatacat
gctaatgttatcgtctttttaatcatagacaaggagtctgcttctaaaagccacatgctt
aattcaatgatgttgttacccatacataatttggggatgagcatcagcagatattatgat
ttccagcagacaaaagcaacatgcgcctcaaagaaaaacgttcctatcttcatgaattgt
agtgaagaagcaatgaagcgcagtgtatatggtttggaagcagatgcaattggaagattt
ttaattgcaatggctgtcacaggacttattttcttcctcttgattttccttctggagacc
acctcatggaccatgagaacgtttgtgtttcgctctattttctttggtatctacaagaaa
tttaataaagaaagagtgtccatggaattatctgtagaatctgaagatgaagacgtacaa
aatgaacgaaatagaatcctggagtatcctcaggagtcactgaattctacagtgcttatt
aaggaacttgcaaagatatattttgcaatgccagccgtttttgctgtgagaaatatctct
gttgcaatcaaaaaagaggaatgctttgggttgcttggattaaatggagctgggaaaact
acttccttccaaattttgactggagaggaggttgctacctctggggatgtgttcattgag
cacttgagcatcacgaaaaatgtcctaaaggtcagatcaaaaattggctattgcccacaa
tttgacgccttgctggattacatgactgctcgggaaataatgactatgtatgccaggtta
tgggggattcctgagaagcagattaaccattatgtaaataagtcaatacaatcactgaat
ctggagccatatgctgacaagtttatctatacttacagtggaggaaacaaacgtagactg
agtactgctattgccctaatgggaaagccctccgtcatcttcctggacgagccatcaact
ggtatggacccagtagcccggcgcctgctctggaacacagtgacacagacccgtgaaagt
ggcaaagtcatcatcataacatctcacagtatggaagaatgtgacgctctttgtactagg
ctggccatcatggtaaagggaaagtttgtgtgcctgggcagccctcagcatctcaagaac
aaatttggcaatgtttacatcctaaaagccaagatcaagattgataaggatgagaacaaa
ttaaaggattttaaagattttatggcaacaaccttcccagatgtttggtattttggagga
agctaa
DBGET
integrated database retrieval system
