Sus scrofa (pig): 100623018
Help
Entry
100623018 CDS
T01009
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100623018 (ZC3H12B)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
100623018 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
100623018
NCBI-ProteinID:
XP_003360389
Ensembl:
ENSSSCG00000012367
UniProt:
A0A4X1VPU5
F1RTN0
LinkDB
All DBs
Position
X:51231526..51749627
Genome browser
AA seq
836 aa
AA seq
DB search
MTATAAVETPKMKKSASKEEKQQPKQDSTEQGNADYEEWLSPETDTEHLNLKSRNNDNSC
QLGDVQLKKKEIPSKPHRQLCRSPCLDHPSFSQSSILQDGKIDLEKEYQAKMDFALKLGY
AEEQIQSVLNKLGPESLINDVLAELVRLGNKGDLEGQVNLSVLMPRGPSSREIASPELSL
EDEIDNSDNLRPVVIDGSNVAMSHGNKEEFSCRGIQLAVDWFLDKGHKDITVFVPAWRKE
QSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDN
YRDLQVEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQP
CPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSTVKTMSEGTLAKCGTGLSSAK
GEITSEVKRVAPKRQSDPSIRSVAVEPEEWLSIARKPEASSVPSLVTALSVPTIPPPKSH
AVGALNTRSASSPVPGSSHFSHQKSSLEHMTSMQYPPILVTNSHGTPISYAEQYPKFESL
GDHGYYSVLGDFSKLSINSMHNRDYYMAEADRGLYARNPSLCPDNRMSHTRNDNYSSYNN
LYLAVADTHSEGNLKLHRSASQNHLQPFPHGYHEALTRVQSYGPEDSKQAPHKQSVPHLV
LHAQHPATGARSSCPGDYPMLPNVHPGATPQPGRALVMTRMDSISDSRLYESNPMRQRRP
PLCREQHASWDPLPCATDSYGYHSYPLSNSLMQPCYEPVMVRSVPEKMEQLWRNPWVGMC
NDSREHVIPEHQYQTYKNLCNIFPSNIVLAVMEKNPHTADAQQLAALIVSKLRAAR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccgctgcagtggaaacaccaaaaatgaagaagagtgcctccaaggaagag
aagcaacagcctaagcaagatagcacagagcagggtaatgctgattatgaagagtggttg
agccctgagactgatactgagcatctgaaccttaaaagtagaaacaatgataacagctgc
caacttggagatgttcaactgaagaaaaaggagattccctctaagccacatcgtcagctc
tgcagatcaccctgcctagatcacccaagcttctcccagagcagcattctacaggatggg
aagattgacttggaaaaagaataccaagccaagatggattttgctttaaagttgggttat
gcagaagaacagattcaatcagtgctgaataagttgggtccagaatcacttattaatgat
gtattggcagagcttgtcagacttgggaacaaaggtgatttggaagggcaggtcaacttg
agtgtgttaatgcctcgagggcccagctccagagagattgcaagtcctgaattgtctctt
gaagatgaaatagacaacagtgacaatttaaggccagttgtcatagatggaagtaatgtg
gcaatgagtcatggaaataaagaagagttctcttgcagaggaatacaacttgctgtggat
tggtttctagataaaggccataaagacattactgtatttgtgcctgcatggagaaaggag
caatcccgccctgatgcaccaattacagatcaagatatcctacgtaaactggaaaaggaa
aagattcttgtcttcacaccatcccgaagggtccagggcaggagagttgtttgctatgat
gatcggttcatagtcaagctggcttttgattctgatggcatcattgtatccaatgataac
tatcgagaccttcaagtagaaaagccagaatggaagaagtttatagaggagcggttgctg
atgtattcttttgtgaatgacaaatttatgcctccagatgatcctttaggacgccatggc
ccaagccttgaaaatttcttaagaaagagacccgttgttcctgagcacaagaagcagcca
tgcccttatggcaaaaaatgcacctatggtcacaagtgcaaatactaccatccagagcgg
gccaaccaaccccagcgttcagtggctgatgagctccgtatcagtgccaaactgtccaca
gtgaaaaccatgagcgaaggcactctggccaagtgtggcacagggctgtccagtgccaaa
ggtgagataacctcagaagtcaaacgtgtggcccccaagcgccaatcggatcccagcatc
cggtccgttgctgtggagcctgaggaatggctgtccattgctcgtaagcctgaggccagt
tctgtcccctcacttgtgacggctctaagtgtccccacaatcccaccccccaaaagccat
gcagtgggtgcactcaacactcgttcagctagtagcccggtgccaggatcctctcatttc
tcccaccagaagtcctcattggagcacatgactagcatgcagtatccccccatcctggtt
accaatagccatgggacccctattagctatgctgagcaatacccaaagtttgagtccttg
ggggaccatggctactattcagtgttaggtgacttctccaaactaagcatcaatagcatg
cataatcgagattactacatggctgaagcagaccgagggttgtatgcccggaatcccagc
ctctgtcctgataatcgtatgagccataccaggaacgacaactattcttcttacaacaac
ctgtatttggctgtagctgatactcactctgaaggcaatttgaagctgcatcgctcagcc
tctcagaaccatcttcagccttttcctcacggttaccatgaagccttaacgcgagtgcag
agctatggcccagaggattctaagcaagccccccacaagcagtcagtcccccacttagtt
ctgcatgctcagcacccagcaactggagcacgctccagctgtcctggagactatcccatg
cttcccaatgtccatcctggagcaaccccccagccaggacgtgccctagtgatgactcgg
atggacagcatttctgattcccgcctatatgagagcaatcccatgaggcaaagacgccct
cccctctgccgggaacaacatgccagctgggacccactgccctgtgcaaccgactcctat
ggatatcactcctatcccttgagtaacagcctcatgcaaccatgctatgagccagtcatg
gtacggagcgtgcctgaaaagatggagcagctttggaggaatccttgggttggaatgtgc
aatgattccagggagcatgtgatcccagagcaccagtatcagacctacaagaacctctgc
aatattttcccttcaaacatcgtccttgcagtgatggagaagaatccccacacagcagat
gcccagcaactggcagccttgattgtttctaagcttagggctgcacgttga
DBGET
integrated database retrieval system