Sus scrofa (pig): 100623159
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Entry
100623159 CDS
T01009
Symbol
YTHDF2
Name
(RefSeq) LOW QUALITY PROTEIN: YTH domain-containing family protein 2
KO
K20102
YTH domain-containing family protein
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100623159 (YTHDF2)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100623159 (YTHDF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
100623159
NCBI-ProteinID:
XP_005665209
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All DBs
Position
6:85717147..85756750
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AA seq
732 aa
AA seq
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MPRPLCEARGSPTRPGPAAPGRAEPRRRLSXGPGFEALRPAAPSASPSPALPAPPRVSEP
AGRAVFPSLGGPRFSXLFPSPSVKPRFPRVVRGAAPASLRGARWPRAFPRLPSSVSPSLP
FPDASSGLRLYSLLGPGFNWCFLFHFFLGRPAARRRFLRPQRPKGQGNKVQNGSVHQKDG
LNDDDFEPYLSPQARPNNAYTAMSDSYLPSYYSPSIGFSYSLGEAAWSTGGDTAMPYLTS
YGQLSNGEPHFLPDAMFGQPGALGSTPFLGQHGFNFFPSGIDFSAWGNNSSQGQSTQSSG
YSSNYAYAPSSLGGAMIDGQSAFASETLNKAPGMNTIDQGMAALKLGSTEVASNVPKVVG
SAVGSGSITSNIVASSSLPPATIAPPKPASWADIASKPAKQQPKLKTKNGIAGSSLPPPP
IKHNMDIGTWDNKGPVAKAPSQALVQNIGQQPTQGSPQPVGQQATSSPPVAQASVGQQTQ
PLPPPPPQPTQLSVQQQAAQPTRWVAPRNRGSGFGHNGVDGNGVGQSQAGSGSTPSEPHP
VLEKLRSINNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYR
SMNGKGPVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPN
SQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEE
ESVKKERQGRGK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggccattgtgtgaggcgagagggagcccgactaggcccgggcccgccgccccc
ggtcgggccgagccgaggcggcgcctttcgnncgggccgggtttcgaggctctccggccg
gccgcgcccagcgcctcgccctcacccgcactccccgctcctccccgggtctcggagccc
gccggccgcgccgtgttcccttctctcggcgggcctcgtttttccntcttgtttccttcc
ccttctgtgaagccccggtttcctcgcgttgttcgtggcgcggcccccgcttctctccgc
ggggcccgctggcctcgcgctttcccccgcctcccatcctcagtctccccctcactcccg
ttccccgacgcctcctcaggcctgcgcctttattcccttctcgggcccggctttaattgg
tgtttccttttccatttcttcctcggacgacccgctgctcggcgacgtttccttcgcccg
cagagaccaaaaggtcaaggaaacaaagtgcaaaatggatctgtacatcaaaaggatgga
ttaaatgatgatgattttgaaccttacttgagtccacaggcaaggcccaataatgcatat
actgccatgtcagattcctacttacccagttactacagtccctccattggcttctcctat
tctttgggtgaagctgcttggtctactgggggtgatacagccatgccctatctaacttct
tatggacaactgagcaacggagagcctcacttcctaccagatgcaatgtttggacaacca
ggagccctaggtagcactccatttcttggtcagcatggttttaatttctttcccagcggg
attgacttctcagcttgggggaataatagttctcagggacagtctactcagagctctgga
tatagtagtaattatgcttatgcacctagctccttaggtggagccatgattgatggacag
tcagcttttgccagtgagaccctcaataaggctcctggcatgaatactatagaccaaggg
atggcagcactaaagttgggtagcacagaagttgcaagcaatgttccaaaagttgtaggc
tctgctgttggtagtgggtccattactagtaacattgtggcttccagtagtttgcctcca
gctacgattgctcctccaaaaccagcatcttgggctgatattgctagcaagcctgcaaaa
caacaacccaagttgaagaccaagaatggcattgcagggtcaagtcttccaccaccccca
ataaagcataacatggatattggaacttgggataacaagggtcctgtggcaaaagccccc
tcacaggctttggttcagaatataggtcagcagccaacccaggggtctccccagcctgta
ggtcaacaggctaccagtagcccaccagtggctcaggcatcagtagggcaacagacacag
ccattgcccccacctccaccacagcctactcagctctcagtgcagcaacaggcagctcag
ccaacccgctgggtagcacctcggaaccgtggcagtgggttcggtcataatggggtggat
ggtaatggagtaggacagtctcaggctggatctggatctactccttcagaacctcaccca
gttttggagaagcttcggtccattaataactacaaccccaaggattttgactggaatctg
aaacatggccgggttttcatcattaagagctactctgaggacgatatccaccgttccatt
aagtataacatctggtgcagcacagagcatggtaacaagagactggatgctgcttatcgc
tccatgaacgggaagggccccgtttacttacttttcagtgtcaacggcagtggacacttc
tgtggcgttgcagagatgaaatctgctgtggactacaacacatgtgcaggtgtatggtcc
caggacaaatggaagggtcgttttgacgtcaggtggatttttgtgaaggacgttcccaat
agccaactgcgacacattcgcctggagaacaacgagaataaaccagtgaccaactccagg
gacactcaggaagtgcctctggaaaaggctaagcaggtgttgaaaatcatagccagctac
aagcataccacttccattttcgatgacttctcacactatgagaaacgccaagaggaagaa
gagagtgttaaaaaggaacgtcaaggtcgtgggaaataa
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