Sus scrofa (pig): 100623260
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Entry
100623260 CDS
T01009
Symbol
CCDC36
Name
(RefSeq) interactor of HORMAD1 protein 1
KO
K26085
interactor of HORMAD1 protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100623260 (CCDC36)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
100623260 (CCDC36)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IHO1
HsbA
CCDC113_CCDC96_CC
Rotamase_2
Gin
TACC_C
Motif
Other DBs
NCBI-GeneID:
100623260
NCBI-ProteinID:
XP_005669595
Ensembl:
ENSSSCG00000011376
UniProt:
A0A8D1IPB6
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All DBs
Position
13:31802963..31836911
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AA seq
587 aa
AA seq
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MNFNVWNIKEMLSIPSGSGTTRSSNWNNNQTDYSSLSDSQFLFGSQFCPESSETLSTPLD
FGVHLRHPKQSQQNSLDSEPSIFTKYQTKPQLFGGDTKDGGLFPLPLSVGKSKGLLEQFE
EKKKSAKDKCDSETLYNLISHIRESIHRLQTSVENSEEHLSSRSQTILDSLETVAKTLQE
TAQAQSDLVLETMQDKGNMKQAILELQKRFEARQAEFIEMKSNLKQLEVLVAQQSKDLQQ
LSEQLGQLNMPSVLAELKQLISVPQIPRHLKESTSQTSPPLAQSINFTRQGKNAFKEPVM
WQTQALPTARNLSVGSLRPGEFDVWGVGAKSDALQEEATRVAVGTGKRNKQIKDKAVQTN
CQNRAITKTASGILGHNVPSERDLVFQGASQLISLDLNNFAASIKNTCQKCQAKGMFLCD
SCEQRLVNGQKGRTVERGRKGKKQQRKAPRGRLLARKQEQTTSKTCVSHSKYPQPPVSGP
QRPPQGQQEALAQSLHLQGPRSPTKPVCSALGGTVMATKTVKSMQGNFLQLSGHASQDNS
LLSCSSQGDHQMSWFSDLNLGREPPLCKELGKNTLYDLGFDSSDDGF
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaatgtctggaatatcaaagagatgctcagtattccctcaggttctgggact
actaggtcatctaactggaataataatcagactgattactccagtctcagtgattcccag
ttcctttttggatcccagttctgtccagaaagttcagagaccctgtcaacacccttggac
tttggtgtccatttgagacatccaaaacagtcacaacagaattctctggatagtgaacct
agtattttcacaaagtaccaaacaaaaccccagctgtttggaggagatacaaaagatgga
ggcttatttcctcttcctttgtcagtcggaaaatcaaaaggcctcttggaacagtttgag
gagaaaaagaaaagtgcaaaagacaaatgcgacagtgagactctatacaacttaatttcc
catatcagagaaagcattcacaggttacagacatctgtggaaaactctgaggaacatctc
agttcaagaagccaaactattttggattctttggagactgtggccaagacattgcaagag
actgcgcaagcccagagtgatctggtgttggaaacaatgcaggacaaaggcaacatgaag
caggccatccttgaattacaaaagagatttgaagctagacaagcagagtttatagaaatg
aagtccaacctgaagcaacttgaagttttagttgcccagcaaagtaaggacttgcagcag
ctgtccgaacagctaggccagctgaatatgcctagtgtcctagctgagctaaagcaactg
atctctgtccctcagataccaagacacttgaaagagagcacttctcagacctcaccacct
ttggcccaaagcatcaatttcaccaggcagggaaaaaatgcctttaaggaaccagttatg
tggcaaactcaagccctccctactgcacgcaatcttagtgtgggctccctgaggcctggg
gagtttgatgtctggggtgtgggagcaaagagtgatgctctccaagaagaagctacacgg
gtggcagttggaactggcaaaagaaacaagcaaatcaaggacaaggcagtgcagaccaac
tgccagaatagggctattactaaaacagcctccggcatcctgggccataacgttcccagt
gaaagggacctggttttccaaggagcctcacagcttatatccctggacttaaacaacttt
gcagccagcattaagaacacctgccaaaaatgtcaagccaaaggcatgtttttgtgtgac
tcttgcgaacaaaggttggtgaatggacagaaaggcagaactgtagaaagagggaggaaa
ggcaagaagcagcagaggaaagcccccagaggcaggcttctagccaggaaacaagaacaa
accacaagcaaaacctgtgtttcccattctaaatatcctcagcctccagtttctggccca
caaaggccccctcaggggcagcaggaagcccttgctcagtccttgcatcttcagggcccc
aggagccccacaaagccagtctgctctgctctgggaggcacagttatggccactaagaca
gtaaagtcaatgcaagggaacttcttgcagctgagtggacatgcttcccaagacaacagc
ctgctttcttgcagttctcagggggaccaccagatgagctggttcagtgacctcaatctc
ggaagagagccccctctctgcaaggagctagggaagaatacgctctatgacctgggtttt
gacagcagtgatgatggcttctga
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