Sus scrofa (pig): 100623278
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Entry
100623278 CDS
T01009
Symbol
FGD4
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4 isoform X1
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100623278 (FGD4)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
100623278 (FGD4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
IQ_SEC7_PH
FYVE_2
PH_13
RHG20_PH
zf-RING_UBOX
zf-RING_5
zf-HC5HC2H
PH_11
PH_16
Mcp5_PH
Motif
Other DBs
NCBI-GeneID:
100623278
NCBI-ProteinID:
XP_020947725
Ensembl:
ENSSSCG00000000530
UniProt:
A0A287ALB3
A0A4X1VUC4
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All DBs
Position
5:complement(41683265..41879197)
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AA seq
940 aa
AA seq
DB search
MQATPPGVRSPLGSPLSSRSRPDLGVGGRRVVSERGQMSGEGDYNFRRVAIRRKSNLSYL
PLGTPRPWSRPSSHLGWAETATFRGQAPADSPGSSICPKITIVPPCLKSSTTTLIDENVC
VEEAQGINGKTPAKHPAPSPKPQVPPKPLHLQNSPSSNIHQTPRHKALSSAKPRMEEVKP
ASASCVSKEKPSKVSDLISRFEGGSPLTNYSELKKDSAINLNVPRTPGRHGLTTTPQQKL
LSQYLPEKQGHDTDHTQGVQTCVVNGMVAAQNQMECEEDKAATLSPDTPVQTSEPLPDTD
LVNGEKEEKTTVPALPTTSDCEGSASDSSCRTPPVGPVLPLEEGRADTEDKVQERENGES
PLELDQLDQQHEMKETNEQKLHKIANELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFP
AEMVNKIFSNISSINAFHSKFLLPELEKRMQEWETTPRIGDILQKLAPFLKMYGEYVKGF
DNAMELVKNMTERIPQFKSVVEEIQKQKICGNLTLQHHMLEPVQRIPRYEMLLKDYLRKL
PPDSLDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKE
GQILKLAARNTSAQERYLFLFNNMLLYCVPRFSLVGSKFTVRTRVGIDGMKIVETHNEEY
PHTFQVSGKERTLELQASSEQDKEEWIKALQETIDAFHQRHETFRNAIAKDNDIQSEVST
AELGKRAPRWIRDNEVTMCMKCKEPFNALTRRRHHCRACGHVVCWKCSDYKAQLEYDGGK
LSKVCKDCYQIISGFTDSEEKKRKGILEIESAEVSGNSVVCSFLQYMEKSKPWQKAWCVI
PKQDPLVLYMYGAPQDVRAQATIPLLGYVVDDMPRSADLPHSFKLTQSKSVHSFAADSEE
LKQKWLKIILLAVTGETPDGLSKHLDTLDSHPESKRKSEC
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccccccggggtccggtcgcccctcggcagtccgctgagttcgcgctcg
cggcccgacttgggcgtgggagggcgccgagtcgtaagcgagcgcggccagatgagcggc
gagggcgactacaacttcaggcgggtggcgatccggcgaaagtcaaacctctcctacctg
cctctcgggaccccccggccctggagtcggccctcgtcgcacttgggatgggccgagacg
gccaccttcaggggccaggcccccgcagactctccaggcagcagtatctgtccaaagatt
actatagttccaccttgtttgaaaagcagcacaaccacgttgattgatgagaatgtatgt
gttgaagaggctcagggaataaatgggaaaacgccagcaaaacacccagctccaagtcca
aagccacaagtgcctccaaagccattacatctgcagaattcaccttcgtccaatatacac
caaacccccaggcacaaagctttatctagtgcaaaaccaaggatggaggaagtaaaacct
gcctctgcttcttgtgtctcaaaagaaaaacccagtaaggtatcagatctcatcagtcgc
tttgaaggaggcagcccattaacaaattacagtgaattgaagaaagattctgctataaac
ctaaatgttcctagaaccccaggaaggcacggattgacaaccacacctcagcaaaaactc
ctctcccagtacttaccagagaagcagggacatgatacggatcacactcagggtgtacag
acttgcgtggttaatggtatggtagcagcacaaaaccagatggaatgtgaggaggataaa
gcagccactcttagcccagatactcctgttcagacttccgaacccttgcccgatacagac
ttagtaaatggagaaaaagaagaaaaaaccacagtccctgcattgcccacaacaagtgac
tgtgagggaagtgcttctgacagtagctgcaggactccacctgtcggcccagtgctcccc
ctggaagaagggagggcagacacagaagacaaggtacaagagagggaaaatggagaaagc
cctctggaattggatcagctagaccaacagcatgagatgaaggagaccaatgagcaaaaa
cttcacaaaatagccaatgagcttttgcttacggaaagagcttacgtcagccgacttgac
ctcttagatcaggtattttactgcaaactattggaagaagcaaatcgaggctcatttcca
gcagagatggtgaataaaatcttttctaatatttcatcaataaatgccttccatagtaaa
ttcctattgccagagctggagaagagaatgcaagaatgggaaacgactcctagaattggt
gacatccttcagaaattggcaccattccttaagatgtatggagaatatgtgaaggggttt
gataatgcaatggaattggttaaaaacatgacagagcgtattccccagttcaagtcagta
gttgaagaaattcagaaacagaagatctgcgggaacttgactttgcagcatcacatgcta
gaacctgttcagcggattccccggtatgagatgctccttaaggattacctaaggaaactg
ccccctgattctctggactggaatgatgctaaaaaatcacttgaaattatatctacagca
gcaagccattctaatagtgcaataagaaaaatggagaacctaaagaaactcttagagatt
tatgaaatgttgggagaagaagaagacattgtaaatccttcaaacgaactaataaaagaa
ggacagatcctcaagctagctgctcggaacacatcagcacaagaacgctaccttttctta
ttcaacaacatgttgctgtactgtgtgccaagattcagcttggtgggctctaaattcaca
gttcgaaccagggttggcatcgatggaatgaaaattgtggagactcacaatgaagaatat
ccacatactttccaggtatctgggaaagagaggacactggaactacaagccagctctgag
caagataaagaggaatggatcaaggcacttcaagagactattgatgctttccatcagagg
catgaaaccttcagaaatgcaattgccaaggataatgacattcagtcagaggtttctact
gctgaactaggaaaaagggctccaagatggatccgagataatgaagttacgatgtgtatg
aaatgcaaagagccttttaatgcactgacacggagaaggcatcattgtcgagcatgtggt
catgtggtttgttggaagtgttctgactataaagctcaacttgagtatgatggtggtaaa
ttgagcaaagtttgtaaagactgttatcaaataataagtggcttcacagacagtgaagaa
aagaaaagaaaaggaattttagagattgaatcagcagaagtatctggaaacagcgtggtg
tgcagctttcttcagtatatggaaaagtcaaaaccttggcagaaagcttggtgtgtgatc
cccaaacaagaccctcttgtactgtacatgtacggtgccccccaggatgtcagggcccag
gccaccattccactcctgggctatgttgtggatgacatgccaaggagtgcagacctgcca
catagtttcaaactgacccagtccaagtctgtacacagctttgctgcagacagtgaggaa
ctgaaacagaagtggctgaagatcatccttttagctgtcacaggtgagacaccagatggt
cttagcaagcatctggacactttggacagtcatcctgaatctaaaagaaaatcagaatgc
tga
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