Sus scrofa (pig): 100623578
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Entry
100623578 CDS
T01009
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100623578 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100623578 (VPS35)
Membrane trafficking [BR:
ssc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
100623578 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
KH_GLD-3_1st
Imm5
Motif
Other DBs
NCBI-GeneID:
100623578
NCBI-ProteinID:
XP_020949905
Ensembl:
ENSSSCG00000026239
UniProt:
A0A480X4F2
LinkDB
All DBs
Position
6:37944099..37977091
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPIDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcacctcaggatgagcaagaaaagctcttggatgaagccata
caggctgtgaaggtccagtcattccagatgaagagatgcctggacaaaaacaagcttatg
gatgctctgaaacatgcttctaatatgcttggtgaactccggacttctatgttatcacca
aagagctactatgaactttatatggctatttctgatgaactgcactacttggaagtctac
ctgacagatgagtttgctaaaggaagaaaggtggcagatctctatgaactcgtgcagtat
gctggaaacattattccaaggctttacctgctaatcacagttggagttgtatatgtcaag
tcatttcctcagtccaggaaagatattttgaaagatttggtagaaatgtgccgtggtgta
cagcatcctttgagaggtctctttcttcggaattatcttcttcagtgtaccagaaacatc
ttacctgatgaaggagagcccacagatgaagagacaactggtgacatcagtgattccatg
gattttgtactactcaactttgcagaaatgaacaagctctgggttcgaatgcagcatcag
ggacatagccgagatagggaaaaaagagaacgagaaagacaagaactgaggattttagtg
ggaacaaatctggtgcgtctcagtcagttggaaggtgtaaatgtggaacgctacaaacag
attgttttgacggggatattggagcaagttgtaaactgcagggatgctttggctcaagaa
tatctcatggagtgtattattcaggttttccctgatgagttccaccttcaaaccttgaat
ccttttcttcgggcctgtgctgagttacaccaaaatgtaaatgtgaaaaacataatcatt
gctttaattgatagattagctttatttgctcatcgtgaagatggacctggaatcccggca
gatattaaactttttgacatattttcacagcaggtggctacagtaatacagtctagacaa
gacatgccttcggaggatgttgtatctttacaagtctctctcattaatcttgctatgaag
tgttatcctgatcgtgtggactatgttgataaagttctagaaacaacagtggagatattt
aataagctcaaccttgaacatattgctaccagtagtgcagtttcaaaggagctcaccaga
cttttgaagatacccattgacacttacaacaatattttaacggtcttgaaattaaaacat
tttcacccactctttgagtactttgactatgagtccagaaagagcatgagttgttacgtg
cttagtaatgttctggattataacacagaaattgtctctcaagaccaggtggattccatc
atgaatttggtatccacgttgattcaggatcagccagatcaacccgcagaagaccctgac
ccagaggattttgccgatgagcagagccttgtgggcagattcattcaccttctacggtcc
gaggaccctgatcagcagtacttgattttaaacacagcacgaaaacattttggagctggt
ggaaatcaacggattcgcttcacactgccacctttggtatttgcagcctaccagctggct
tttcgctacaaagagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatt
ttttcatttgctcaccagactatcagtgctttgatcaaggcagagctggcagaattaccc
ttaagactttttcttcagggtgctctagctgctggagaaatcggttttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctctgtacgaggatgagatcagtgat
tccaaagcacagctggctgccatcaccttgatcattggtacttttgagaggatgaagtgc
ttcagcgaagagaatcatgaacccttgaggacgcagtgcgctcttgctgcatccaaactt
ctgaagaaacctgatcagggccgagctgtgagcacgtgcgcacatctcttctggtctggc
cgaaacacagacaaaaatggggaggagcttcatggaggcaagagggtaatggaatgccta
aagaaagccctaaaaatagcaaatcagtgcatggacccctctctacaagtgcaacttttt
atagaaattctgaacagatatatctatttttatgaaaaggaaaatgatgcggtcacaatt
caggttttgaaccagcttatccaaaagattcgagaagacctcccaaatcttgagtccagc
gaagaaacagagcagattaacaaacattttcataacacactggagcatttgcgcttgagg
cgggaatcaccagaatctgaggggccaatttatgaggggctcatcctttaa
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